BAC Information

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BAC

Clone NameB6Ng01-010B03
Chromosome14 (Build37)
Map Location 79,891,038 - 80,082,803
singlet/doubletdoublet
Overlap geneElf1, LOC668560, Sugt1, Lect1
Upstream geneAkap11, Dgkh, LOC673649, 1300010F03Rik, LOC629709, LOC100043765, AU017455, 1190002H23Rik, Narg1l, Mtrf1, Kbtbd7, EG432879, Wbp4
Downstream genePcdh8, EG629734, Olfm4, LOC672828
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-010B03.bB6Ng01-010B03.g
ACCDH845845DH845846
length1,134412
definitionDH845845|Mus musculus domesticus DNA, BAC clone: B6Ng01-010B03, 5' end.DH845846|Mus musculus domesticus DNA, BAC clone: B6Ng01-010B03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(80,081,660 - 80,082,803)(79,891,038 - 79,891,455)
sequence
gaattctttagttacctttgcaataagagctaagttttggatgggcagag
aaagtttcctgccctttgtgcttctcaaaccagctcactggagttgtcat
cttttttcttgaaaaccctaactatatatataccaaattcatcttcagcc
acaaggttaggtttaaatagcagaaggatatgggcaagggacaagacata
caaatgagtcaagatctagtgtacggaccattgtctccactcccacaggt
ggtctgaagaagttcttattgcttgaagagaagaagggaactcaggaggt
gatctctttgactgcagtctcttcttcatagatgactaccctcgtgggat
gctgtcttcaggggctttaccagtcctcaagtcccagttgacttctcgtt
caggacaatgacttatctctgcaccttgagtcaaagttaaggagacaaac
aaacaaataaataaagatgggacgcaggttttcatcctgcttacagtaat
atggtaagcccaagcaaggagtctgtgctttttacccaaagcaccaccca
agtttctgtttcactgctgtgagagtcaagctaccccaagaaggaaagcc
cacagacaataataataaacccagaggaaataaagataatgcagagacga
aaacctccatagatgctacaatgaataccctgacaggtgttaagagataa
catatcagtgaaataaaagaaaattctgtctttgaaaaccatttcagaac
aagaagtatcaagtagaaggtttgtcaagtgctgtgcaagggtagcacat
cccctggaactgcagttacagacaagtgtgagctgccatgtgggtgctgg
gaattgaacccaggtcctctggaagagcagccaatgttttaactgtccag
ccctgcagagtggtttttaaagggaaaatacggggttcaaactaagtgag
ttaggatggagttggttggctcttattgtctattaggtcagtgtagccaa
ttagacatttgattgctggaccttggtgatcagccctcagcatgagtcaa
gcctaaggagtggacaataaaagaaatggaacttggtgggctagctttag
ggggtggagtgtctatgtagggatctatagatta
ataggtggcataacaatgtgagtgtgttaatttttacagaaccacatact
tagaaccatggttgagatggtaagttgactctttatatatattttaattt
ttttatatatattttggcacaattacattttttaatttttcttttttatg
tgtatgaacattttacttgcacgtctgtgtgcatgccctgtgcgtgctgg
tgcccgcagaggggagaggaggcaacggcggatcccttggaactgcagtc
cagatgttggtaactgcctgtgagtgctgggaactgaacctgggtcctct
gcaggagcaagtgctcataaccactgaaccatccctccagccccgctccc
aatgaacaggttttttgtttgtttgtttttttgtttttgttttttggttg
gtttttttgttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_80081660_80082803
seq2: B6Ng01-010B03.b_47_1180 (reverse)

seq1  TAATCTATTAGAGTCCCTTCCATAGACACTTCCACACCCCTAAAGCTAG-  49
      ||||||| |||| |||| | ||||||||| ||||| ||||||||||||| 
seq2  TAATCTA-TAGA-TCCC-TACATAGACAC-TCCAC-CCCCTAAAGCTAGC  45

seq1  CCACCAAGGTCCATTCTCTTAT-TTGTCCACTTCCTTATGCTTGACTCAT  98
      |||||||| |||||| |||| | |||||||| |||||| |||||||||| 
seq2  CCACCAAGTTCCATT-TCTTTTATTGTCCAC-TCCTTAGGCTTGACTCA-  92

seq1  TGCTGA-GGCTGATCACCAAGGTCCAGCAATCAAATGTCCTATTTGGCTA  147
      |||||| ||||||||||||||||||||||||||||||| ||| |||||||
seq2  TGCTGAGGGCTGATCACCAAGGTCCAGCAATCAAATGT-CTAATTGGCTA  141

seq1  CACTGA-CTAATATGACCAATAAGAGCCAACCAACT-CATCCTAACTCAC  195
      |||||| |||||| || ||||||||||||||||||| |||||||||||| 
seq2  CACTGACCTAATA-GA-CAATAAGAGCCAACCAACTCCATCCTAACTCA-  188

seq1  CTTAGTTTGAACCACCCTATTTTTCCCTTTAAAAACCACTCCTGCAGGGC  245
      ||||||||||||| || || |||||||||||||||||||| |||||||||
seq2  CTTAGTTTGAACC-CCGTA-TTTTCCCTTTAAAAACCACT-CTGCAGGGC  235

seq1  TGGACAGTTAAAACATTGGCTGCTCTTCCAGAGGACCTGGGTTCAATTCC  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACAGTTAAAACATTGGCTGCTCTTCCAGAGGACCTGGGTTCAATTCC  285

seq1  CAGCACCCACATGGCAGCTCACACTTGTCTGTAACTGCAGTTCCAGGGGA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACCCACATGGCAGCTCACACTTGTCTGTAACTGCAGTTCCAGGGGA  335

seq1  TGTGCTACCCTTGCACAGCACTTGACAAACCTTCTACTTGATACTTCTTG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTACCCTTGCACAGCACTTGACAAACCTTCTACTTGATACTTCTTG  385

seq1  TTCTGAAATGGTTTTCAAAGACAGAATTTTCTTTTATTTCACTGATATGT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAAATGGTTTTCAAAGACAGAATTTTCTTTTATTTCACTGATATGT  435

seq1  TATCTCTTAACACCTGTCAGGGTATTCATTGTAGCATCTATGGAGGTTTT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCTTAACACCTGTCAGGGTATTCATTGTAGCATCTATGGAGGTTTT  485

seq1  CGTCTCTGCATTATCTTTATTTCCTCTGGGTTTATTATTATTGTCTGTGG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCTCTGCATTATCTTTATTTCCTCTGGGTTTATTATTATTGTCTGTGG  535

seq1  GCTTTCCTTCTTGGGGTAGCTTGACTCTCACAGCAGTGAAACAGAAACTT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCCTTCTTGGGGTAGCTTGACTCTCACAGCAGTGAAACAGAAACTT  585

seq1  GGGTGGTGCTTTGGGTAAAAAGCACAGACTCCTTGCTTGGGCTTACCATA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGGTGCTTTGGGTAAAAAGCACAGACTCCTTGCTTGGGCTTACCATA  635

seq1  TTACTGTAAGCAGGATGAAAACCTGCGTCCCATCTTTATTTATTTGTTTG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGTAAGCAGGATGAAAACCTGCGTCCCATCTTTATTTATTTGTTTG  685

seq1  TTTGTCTCCTTAACTTTGACTCAAGGTGCAGAGATAAGTCATTGTCCTGA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCTCCTTAACTTTGACTCAAGGTGCAGAGATAAGTCATTGTCCTGA  735

seq1  ACGAGAAGTCAACTGGGACTTGAGGACTGGTAAAGCCCCTGAAGACAGCA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAGAAGTCAACTGGGACTTGAGGACTGGTAAAGCCCCTGAAGACAGCA  785

seq1  TCCCACGAGGGTAGTCATCTATGAAGAAGAGACTGCAGTCAAAGAGATCA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACGAGGGTAGTCATCTATGAAGAAGAGACTGCAGTCAAAGAGATCA  835

seq1  CCTCCTGAGTTCCCTTCTTCTCTTCAAGCAATAAGAACTTCTTCAGACCA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTGAGTTCCCTTCTTCTCTTCAAGCAATAAGAACTTCTTCAGACCA  885

seq1  CCTGTGGGAGTGGAGACAATGGTCCGTACACTAGATCTTGACTCATTTGT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGGGAGTGGAGACAATGGTCCGTACACTAGATCTTGACTCATTTGT  935

seq1  ATGTCTTGTCCCTTGCCCATATCCTTCTGCTATTTAAACCTAACCTTGTG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTTGTCCCTTGCCCATATCCTTCTGCTATTTAAACCTAACCTTGTG  985

seq1  GCTGAAGATGAATTTGGTATATATATAGTTAGGGTTTTCAAGAAAAAAGA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAAGATGAATTTGGTATATATATAGTTAGGGTTTTCAAGAAAAAAGA  1035

seq1  TGACAACTCCAGTGAGCTGGTTTGAGAAGCACAAAGGGCAGGAAACTTTC  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAACTCCAGTGAGCTGGTTTGAGAAGCACAAAGGGCAGGAAACTTTC  1085

seq1  TCTGCCCATCCAAAACTTAGCTCTTATTGCAAAGGTAACTAAAGAATTC  1144
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCCATCCAAAACTTAGCTCTTATTGCAAAGGTAACTAAAGAATTC  1134

seq1: chr14_79891038_79891455
seq2: B6Ng01-010B03.g_65_482

seq1  GAATTCATAGGTGGCATAACAATGTGAGTGTGTTAATTTTTACAGAACCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAGGTGGCATAACAATGTGAGTGTGTTAATTTTTACAGAACCA  50

seq1  CATACTTAGAACCATGGTTGAGATGGTAAGTTGACTCTTTATATATATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACTTAGAACCATGGTTGAGATGGTAAGTTGACTCTTTATATATATTT  100

seq1  TAATTTTTTTATATATATTTTGGCACAATTACATTTTTTAATTTTTCTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTTTTTATATATATTTTGGCACAATTACATTTTTTAATTTTTCTTT  150

seq1  TTTATGTGTATGAACATTTTACTTGCACGTCTGTGTGCATGCCCTGTGCG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGTGTATGAACATTTTACTTGCACGTCTGTGTGCATGCCCTGTGCG  200

seq1  TGCTGGTGCCCGCAGAGGGGAGAGGAGGCAACGGCGGATCCCTTGGAACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGTGCCCGCAGAGGGGAGAGGAGGCAACGGCGGATCCCTTGGAACT  250

seq1  GCAGTCCAGATGTTGGTAACTGCCTGTGAGTGCTGGGAACTGAACCTGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTCCAGATGTTGGTAACTGCCTGTGAGTGCTGGGAACTGAACCTGGG  300

seq1  TCCTCTGCAGGAGCAAGTGCTCATAACCACTGAACCATCCCTCCAGCCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTGCAGGAGCAAGTGCTCATAACCACTGAACCATCCCTCCAGCCCC  350

seq1  GCTCCCAATGAACAGGTTTTTTGTTTGTTTGTTTTTTTGTTTTTGTTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCCAATGAACAGGTTTTTTGTTTGTTTGTTTTTTTGTTTTTGTTTTT  400

seq1  TGGTTGGTTTTTTTGTTT  418
      ||||||||||||||||||
seq2  TGGTTGGTTTTTTTGTTT  418