BAC Information

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BAC

Clone NameB6Ng01-010L08
Chromosome14 (Build37)
Map Location 103,954,771 - 103,955,878
singlet/doubletsinglet
Overlap geneScel
Upstream geneKctd12, LOC668699, Irg1, Cln5, Fbxl3, LOC100043441, Phr1, LOC100043797
Downstream geneLOC100043448, Slain1, Ednrb, Pou4f1, 2610206B13Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-010L08.bB6Ng01-010L08.g
ACCDH846298DH846299
length1,096957
definitionDH846298|Mus musculus domesticus DNA, BAC clone: B6Ng01-010L08, 5' end.DH846299|Mus musculus domesticus DNA, BAC clone: B6Ng01-010L08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctacttcggagtcctgatgtttgagcttagatagtcccctgcctc
tcctctgcccttccaggcacctcacacaagctttcccaagatctatgcca
ccacagtggtaactgtccgtggatgtaactgtaaagagtcgcttcaagga
atacacaggcagttttcaagaaaaatgtatgaaaactgtatgtttcaaac
tatgatacaaagaccagattgaggtgaggggatccccttgtagaaggggc
tgtttatgttgcccgtttttcagatcccttctggtccgagggttgttctg
gggcaacgagcttgtctccccagacctgaattccagtttgagttggaggt
catttctctaactgcagcacggccctgggttccatcaaggaccgccgacg
cacacatccgtgagctttgctctcacagttcaccgtgtgtcttccttgtc
tcgcacaaatagcatttccattccagcaatatcaaaggagcttgtaggaa
ccaagaagtgagctctcagctgttcctgccaccatggctgctgaccgctg
ctgtgttaccctgcaccgagggatggactctcactcctctgaagccatac
gcttaaatatcctcctgcttctacaagttgcctaggtcatggttttttat
cacagagataggaaggtcattaatacagtcaccttatcaatttagggatc
ttaagggtgggtggcaaactgcaatcccaaatgtcgaaatcctcaaatat
caaaatctctaatgtctaagaaaaataaaattacaaatactttaggaaca
agtgtgtatcagcaggctctcacacgcatcattttattagttccataagc
gtaccacgtgggtgcgttttttcccactgagggttaggaagctgtgtaca
tttccctacactggtgagcgtctcagccaaggtctttggtacagaccttt
gatgtccgtcacttgcttcttttctcttcacatactacagctaatcagtg
ttttaatgcaaatttatttttcaaagctgctaaatcagtctggggtcatc
tctcaagtcaacctccccgccccccaggctactcaggaagctttca

gaattctttgtttatattgggtattagccctctatcagatgtaggattgg
taaagatcttctctcaacctgttggttgccattttgtcctattgacagtg
tcttttgccttacagaaggtttgcaattttatgaggtaccatttgtcgat
tcttgatcttagagtataagccattggcgttctgttcaggaacttttccc
ctgtggccatgtgtttgaggtttcccaccactttctctgttaggttcagt
gtatctggttttacatgaaggtccttgatccacttggacctgagttttgt
acagggagataagaatggatctatttgcattcttctatatcttgactacc
agttgaaccagcaccatttgttgaaaacgttgtcttttttttcccattgg
tttagttactttgtcaaaagtcaagtgaccataggtgtgtgggttcattt
ctgggtcttcagttctattccattcatctaccctgcctgtcactgtacca
ataacatgcaagtttttatcactattgcttctgtagtacagtttgaattc
agagaagggggattcccccaaaggtcttttattggtgaaaatagttttcg
ctatcctgggtttttgttatgcaatgaatttaaaaattctctgctaatct
atgaagatgaattaaaatttgaaggggatgcatgaattataaatgctttg
gcgaaggcctttttacaaattatccggcattttgaactggaagagattca
tctttgagatctatttctttctcaagttaattctgtggagatttcacggt
tggtagacaccccgatttatggtgtgaaataggaggtgtttctatattca
agggtaatgtaagagagcgacgtggtgtttattataagcgcactgaaagg
tttaacacgatgtttggagttattttcatttatttaaatttacccagcga
gcacatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_103954771_103955878
seq2: B6Ng01-010L08.b_48_1143 (reverse)

seq1  TGAAAGCTTCCTGAGTTAGCCTGGGGGGGCGGGGAGGGTTGGACTCTGAG  50
      ||||||||||||||| |||||| ||||||||||||||  | |||| ||||
seq2  TGAAAGCTTCCTGAG-TAGCCT-GGGGGGCGGGGAGG--TTGACT-TGAG  45

seq1  -GATGAACCACCAGGACTGATTTAGCAGCCTTTGAAAAATAAATTTGCAT  99
       |||||  | ||| |||||||||||||| |||||||||||||||||||| 
seq2  AGATGA--CCCCA-GACTGATTTAGCAG-CTTTGAAAAATAAATTTGCA-  90

seq1  TTAAAACACTTGATTAGCTGTAGTATGGTGAAGAGAAAAGAAGCAAGTGA  149
      ||||||||| |||||||||||||||| |||||||||||||||||||||||
seq2  TTAAAACAC-TGATTAGCTGTAGTAT-GTGAAGAGAAAAGAAGCAAGTGA  138

seq1  CGGACATCAAAAGGTCTGTACCAAAGACCTTGGCTGAGACGCTCACCAGT  199
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CGGACATC-AAAGGTCTGTACCAAAGACCTTGGCTGAGACGCTCACCAGT  187

seq1  GTAGGGAAATGTACACAGCTTCCTAACCCTCAGTGGGAAAAAACGCACCC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGGAAATGTACACAGCTTCCTAACCCTCAGTGGGAAAAAACGCACCC  237

seq1  ACGTGGTACGCTTATGGAACTAATAAAATGATGCGTGTGAGAGCCTGCTG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTGGTACGCTTATGGAACTAATAAAATGATGCGTGTGAGAGCCTGCTG  287

seq1  ATACACACTTGTTCCTAAAGTATTTGTAATTTTATTTTTCTTAGACATTA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACACTTGTTCCTAAAGTATTTGTAATTTTATTTTTCTTAGACATTA  337

seq1  GAGATTTTGATATTTGAGGATTTCGACATTTGGGATTGCAGTTTGCCACC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTTTGATATTTGAGGATTTCGACATTTGGGATTGCAGTTTGCCACC  387

seq1  CACCCTTAAGATCCCTAAATTGATAAGGTGACTGTATTAATGACCTTCCT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCTTAAGATCCCTAAATTGATAAGGTGACTGTATTAATGACCTTCCT  437

seq1  ATCTCTGTGATAAAAAACCATGACCTAGGCAACTTGTAGAAGCAGGAGGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTGTGATAAAAAACCATGACCTAGGCAACTTGTAGAAGCAGGAGGA  487

seq1  TATTTAAGCGTATGGCTTCAGAGGAGTGAGAGTCCATCCCTCGGTGCAGG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAAGCGTATGGCTTCAGAGGAGTGAGAGTCCATCCCTCGGTGCAGG  537

seq1  GTAACACAGCAGCGGTCAGCAGCCATGGTGGCAGGAACAGCTGAGAGCTC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACACAGCAGCGGTCAGCAGCCATGGTGGCAGGAACAGCTGAGAGCTC  587

seq1  ACTTCTTGGTTCCTACAAGCTCCTTTGATATTGCTGGAATGGAAATGCTA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTTGGTTCCTACAAGCTCCTTTGATATTGCTGGAATGGAAATGCTA  637

seq1  TTTGTGCGAGACAAGGAAGACACACGGTGAACTGTGAGAGCAAAGCTCAC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGCGAGACAAGGAAGACACACGGTGAACTGTGAGAGCAAAGCTCAC  687

seq1  GGATGTGTGCGTCGGCGGTCCTTGATGGAACCCAGGGCCGTGCTGCAGTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTGTGCGTCGGCGGTCCTTGATGGAACCCAGGGCCGTGCTGCAGTT  737

seq1  AGAGAAATGACCTCCAACTCAAACTGGAATTCAGGTCTGGGGAGACAAGC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAATGACCTCCAACTCAAACTGGAATTCAGGTCTGGGGAGACAAGC  787

seq1  TCGTTGCCCCAGAACAACCCTCGGACCAGAAGGGATCTGAAAAACGGGCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTTGCCCCAGAACAACCCTCGGACCAGAAGGGATCTGAAAAACGGGCA  837

seq1  ACATAAACAGCCCCTTCTACAAGGGGATCCCCTCACCTCAATCTGGTCTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAACAGCCCCTTCTACAAGGGGATCCCCTCACCTCAATCTGGTCTT  887

seq1  TGTATCATAGTTTGAAACATACAGTTTTCATACATTTTTCTTGAAAACTG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATCATAGTTTGAAACATACAGTTTTCATACATTTTTCTTGAAAACTG  937

seq1  CCTGTGTATTCCTTGAAGCGACTCTTTACAGTTACATCCACGGACAGTTA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGTATTCCTTGAAGCGACTCTTTACAGTTACATCCACGGACAGTTA  987

seq1  CCACTGTGGTGGCATAGATCTTGGGAAAGCTTGTGTGAGGTGCCTGGAAG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGTGGTGGCATAGATCTTGGGAAAGCTTGTGTGAGGTGCCTGGAAG  1037

seq1  GGCAGAGGAGAGGCAGGGGACTATCTAAGCTCAAACATCAGGACTCCGAA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAGGAGAGGCAGGGGACTATCTAAGCTCAAACATCAGGACTCCGAA  1087

seq1  GTAGAATTC  1108
      |||||||||
seq2  GTAGAATTC  1096


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