BAC Information

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BAC

Clone NameB6Ng01-010O06
Chromosome14 (Build37)
Map Location 119,790,644 - 119,791,698
singlet/doubletsinglet
Overlap geneHs6st3
Upstream geneAbcc4, Cldn10, Dzip1, Dnajc3a, LOC100043828, Ugcgl2, LOC619601
Downstream geneEG621324, LOC100043830, Oxgr1, Gabarapl2-ps, LOC100043831, Mbnl2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-010O06.bB6Ng01-010O06.g
ACCDH846428DH846429
length1,0391,177
definitionDH846428|Mus musculus domesticus DNA, BAC clone: B6Ng01-010O06, 5' end.DH846429|Mus musculus domesticus DNA, BAC clone: B6Ng01-010O06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgcaaactctagacagagggcatatgaactaaagtggaaactct
agttgtgtactaaggcactggagcaaattttacaccatgctgcttccggg
caaagcaggatatttgaacatggtgtatctaaatctactgtctcaacaac
cacaacacttcttacctggatgagataacctttccaattcttgccagtgt
tcatatagatcatgtagctgcattaagtcaggccactgaaattagcattg
aaataaatgcagtttcccgagtctattgtttttctcaatgttcacaacag
atgttgagacttaaaaaggtttgagtcaaacgtgtctgtggttccaagtt
aagcacagaaaaagccagcttatgtgttatcgtcacggttggtactctcg
taaatccgcactgttcagtgtgagatggtttggctagtgttgatcaaacc
tgcttagaaacctggcattgtgataagtcactctggaaaggcttggcaca
atatttgtctgcaaagaacagacaagggtcttcccaaggagcattatcat
ttatgcacaagatttgtttctggaattagaatctgtgaaatgttgtgcct
gcaactctaagcttacatgttcattctgctttctgtatgaagtgttgagt
tgttctgttagccacagataaggaggaaaaaaggcaacagtaaacaagtc
caggtgataatgaacctttgactctacctggttgttatgtttgctgtctc
tccttccacagatataataatgaaattgaaaattctcagagggtgtccag
cacctgtttgtgtatccccttaatgcagtgcattgacgagagaggtttta
ggcttctaacattattaaaaatcaactcctcagttgcattgtagcttgct
cttttcccggcctcagaagagtatccgaatgcttcctctctatctagttt
cctgtagaaaatatatctcagaatttagagtcatattacttttaaattat
taaacgaaaatcattagcacattttctttcctaagaaga
gaattctcacctgaggaataccgaatggcagagaaacacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccatctcacaccattcagaatggctaagattaaaacttcaggtgacagc
agatgctggtgaggatgtggagaaagaggaacacttctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcaggttcctc
agaaaattgtacatagtactaccagaggatcctgcaataactcttctggg
catatatacagaatatgttctaaccggtaagaaggacacatgctccacta
tgttcatagcagccttatttataatagccagaagctggaaagaactcaga
tgcccctcaacagaggaatggatacagaaaatgtggtacaattacaatgg
agtactactcagctattaaaaagaatgaatttatgaaattcctagacaaa
tggatggacctggagggcatcatcctgagtgaggtaacccaatcacaaag
gaactcacacaatatgtactcactgataagtggatattagcccaaaacct
aggatacccaagatataactaaacacataaatttcctaaacacatgaaac
tcaagaaaaatgaagactgaagtgtggacactatgccccttcttagaatt
gggaacaaaacacccatggaaggagttacagagacaaagtttggagctgt
gatgaaaggatggaccatctagagactgccatattcagggatccatccca
taatcagcttccaaacgctgacaccattacatacactagcaagattttgc
tgaaaggactcagatatagctgtctcttgtgagactctgccggggcctag
caaacacagaagtggatgctcacagtcagctattggatggatcacaggac
cccagtggaggagctagaacagtatccaaggagctaagaagatctgcacc
cttgtagtgcacattatgaactaatcagtaccctgagctcttgactctag
ctgcatatgtatcaaagatgtctagtcaaccatcactggaagagaaggcc
cattgacttgcaaacctttatgtgcccagtcacgggaattgccaggccaa
aaatggggaattgtggtgacggaagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_119790644_119791698
seq2: B6Ng01-010O06.b_46_1084

seq1  GAATTCTGCAAACTCTAGACAGAGGGCATATGAACTAAAGTGGAAACTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCAAACTCTAGACAGAGGGCATATGAACTAAAGTGGAAACTCT  50

seq1  AGTTGTGTACTAAGGCACTGGAGCAAATTTTACACCATGCTGCTTCCGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTGTACTAAGGCACTGGAGCAAATTTTACACCATGCTGCTTCCGGG  100

seq1  CAAAGCAGGATATTTGAACATGGTGTATCTAAATCTACTGTCTCAACAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCAGGATATTTGAACATGGTGTATCTAAATCTACTGTCTCAACAAC  150

seq1  CACAACACTTCTTACCTGGATGAGATAACCTTTCCAATTCTTGCCAGTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAACACTTCTTACCTGGATGAGATAACCTTTCCAATTCTTGCCAGTGT  200

seq1  TCATATAGATCATGTAGCTGCATTAAGTCAGGCCACTGAAATTAGCATTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATAGATCATGTAGCTGCATTAAGTCAGGCCACTGAAATTAGCATTG  250

seq1  AAATAAATGCAGTTTCCCGAGTCTATTGTTTTTCTCAATGTTCACAACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAATGCAGTTTCCCGAGTCTATTGTTTTTCTCAATGTTCACAACAG  300

seq1  ATGTTGAGACTTAAAAAGGTTTGAGTCAAACGTGTCTGTGGTTCCAAGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGAGACTTAAAAAGGTTTGAGTCAAACGTGTCTGTGGTTCCAAGTT  350

seq1  AAGCACAGAAAAAGCCAGCTTATGTGTTATCGTCACGGTTGGTACTCTCG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACAGAAAAAGCCAGCTTATGTGTTATCGTCACGGTTGGTACTCTCG  400

seq1  TAAATCCGCACTGTTCAGTGTGAGATGGTTTGGCTAGTGTTGATCAAACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCCGCACTGTTCAGTGTGAGATGGTTTGGCTAGTGTTGATCAAACC  450

seq1  TGCTTAGAAACCTGGCATTGTGATAAGTCACTCTGGAAAGGCTTGGCACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTAGAAACCTGGCATTGTGATAAGTCACTCTGGAAAGGCTTGGCACA  500

seq1  ATATTTGTCTGCAAAGAACAGACAAGGGTCTTCCCAAGGAGCATTATCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTGTCTGCAAAGAACAGACAAGGGTCTTCCCAAGGAGCATTATCAT  550

seq1  TTATGCACAAGATTTGTTTCTGGAATTAGAATCTGTGAAATGTTGTGCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGCACAAGATTTGTTTCTGGAATTAGAATCTGTGAAATGTTGTGCCT  600

seq1  GCAACTCTAAGCTTACATGTTCATTCTGCTTTCTGTATGAAGTGTTGAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTCTAAGCTTACATGTTCATTCTGCTTTCTGTATGAAGTGTTGAGT  650

seq1  TGTTCTGTTAGCCACAGATAAGGAGGAAAAAAGGCAACAGTAAACAAGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTGTTAGCCACAGATAAGGAGGAAAAAAGGCAACAGTAAACAAGTC  700

seq1  CAGGTGATAATGAACCTTTGACTCTACCTGGTTGTTATGTTTGCTGTCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGATAATGAACCTTTGACTCTACCTGGTTGTTATGTTTGCTGTCTC  750

seq1  TCCTTCCACAGATATAATAATGAAATTGAAAATTCTCAGAGGGTGTCCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCCACAGATATAATAATGAAATTGAAAATTCTCAGAGGGTGTCCAG  800

seq1  CACCTGTTTGTGTATCCCCTTAATGCAGTGCATTGACGAGAGAAGGTTTT  850
      |||||||||||||||||||||||||||||||||||||||||||  | |||
seq2  CACCTGTTTGTGTATCCCCTTAATGCAGTGCATTGACGAGAGA--GGTTT  848

seq1  TAGGCTTCTAACATTATTAAAAATCAACTCCTCAGTTGCATTGTAGCTTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCTTCTAACATTATTAAAAATCAACTCCTCAGTTGCATTGTAGCTTG  898

seq1  CTCATTTTCCCGGCCCTCAGAAAAGTATCCGAATGCTTCCTCTCTATCTA  950
      ||| ||||||||| |||||||| |||||||||||||||||||||||||||
seq2  CTC-TTTTCCCGG-CCTCAGAAGAGTATCCGAATGCTTCCTCTCTATCTA  946

seq1  GTTTCCTGTTGAAAATTATTTCTCAATATATTTTAGAAGTCATATTACTT  1000
      ||||||||| ||||| ||| ||||   | | ||||| |||||||||||||
seq2  GTTTCCTGTAGAAAA-TATATCTC---AGAATTTAG-AGTCATATTACTT  991

seq1  TTAAAATTATTAAACAAAAGAATTATTTAGTCACATTTTCTTTTCCTAAG  1050
      || |||||||||||| ||  ||| | |||| ||||||||| |||||||||
seq2  TT-AAATTATTAAACGAA--AATCA-TTAG-CACATTTTC-TTTCCTAAG  1035

seq1  TAAGA  1055
       ||||
seq2  -AAGA  1039