BAC Information

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BAC

Clone NameB6Ng01-011G18
Chromosome14 (Build37)
Map Location 101,254,326 - 101,397,447
singlet/doubletdoublet
Overlap genenone
Upstream geneKlf12, LOC100043413, EG668683, EG668684
Downstream gene1700110M21Rik, LOC100043421, LOC382936, Tbc1d4, Commd6, Uchl3, Lmo7, LOC100043795, LOC545567
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-011G18.bB6Ng01-011G18.g
ACCDH846811DH846812
length1,065511
definitionDH846811|Mus musculus domesticus DNA, BAC clone: B6Ng01-011G18, 5' end.DH846812|Mus musculus domesticus DNA, BAC clone: B6Ng01-011G18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(101,254,326 - 101,255,384)(101,396,931 - 101,397,447)
sequence
gaattccaggactttattccaatgtatgtgctgtttgcatgactatgata
tatgccatgtaacacagttttaggtaaaacaatcatctatacattaatat
ctgtgccatcaattacattcatagaaagtcttaggaaaagagaaagattt
atagaaaagacaaaaaatagatagtatttcctagttcatttctattggta
cagtagactagcttagagtgggtaatataaagacatgcttagagttttat
tttggttcataggactttaagtccaagaccatataaccaaatgtgattgg
cttctattgagaacattgtgcttgttttacccacagcagaaaacagaaac
aaaagtgacatcacagaaacgtacaaaatgtctaccacaaagggagaagc
cagacacaaagaaacagtatgctgcaaggacttagagtacttgtgagcag
aaggagctattgaagaacctactgacagagtagcatgtggttaagtatga
gggttggcccctgtctgttcatagcactctttccacctaagacactggaa
gattagaaaataagggacaatgatcatccatgtcctagaataatgggagg
tggccgctgtgccactataatatgaaatttttccaaggaaaagtttacac
ttattcctctctatcatctcccaccctcatcaaatgtctgtggagatgtg
gagagatagctcaccgagcatcgtgcttgctgttcaaggatggagagtgg
agtttagatccttgtaacatacatataaacaagtgggactgtcagcacat
tctcatatcacacatcatgtgtggggagcgggtgtggcggcagtcccaaa
ggcgccagggactgcagctaagtcatatgacttgcaccttgactttctca
tataaggactaaaaacatcttgagtgctgcgcaggtggtaccaggataca
ggtgaatccaattggtggaggattgcccttgctgccctgatagctggagc
ctcgtgactggcgaggggactggcctgtcatgcgtggatgataagagtat
aaaggagtaaaagtc
cattaatttaatggatgcatcaagactgtttggggaaaggcagatgcttt
ggagttgagtctctcctgcacagtactggtatctgaatggagaaaatgaa
ctacgcagaaaaatatagctttatagtttcttttattctattacgtccct
ggactctgtgaattgctccataatgatatttttcagaaactctttgctct
tctaggtcagaatctatgtttatttcatgactggaatgtagtcataacaa
tatggagctatttcagtttccaaaggggccactgccaaaagaatgattgg
ccaatggaagacgatgactattcaaatgttattcagaagctcagcaacac
acaatatagcacagtatttctcagcataaggtcttctttaaggcaagtta
caagtattacattctgaaactgagccttctgacattttgcttgtgctgag
gtttaacttctctgtgtgctaaatgcctgggatgaggaagaggtttaggg
gtggggaggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_101254326_101255384
seq2: B6Ng01-011G18.b_39_1096

seq1  GAATTCCAGGACTTTATTCCAATGTATGTGCTGTTTGCATGACTATGATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGACTTTATTCCAATGTATGTGCTGTTTGCATGACTATGATA  50

seq1  TATGCCATGTAACACAGTTTTAGGTAAAACAATCATCTATACATTAATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCCATGTAACACAGTTTTAGGTAAAACAATCATCTATACATTAATAT  100

seq1  CTGTGCCATCAATTACATTCATAGAAAGTCTTAGGAAAAGAGAAAGATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCCATCAATTACATTCATAGAAAGTCTTAGGAAAAGAGAAAGATTT  150

seq1  ATAGAAAAGACAAAAAATAGATAGTATTTCCTAGTTCATTTCTATTGGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAAAGACAAAAAATAGATAGTATTTCCTAGTTCATTTCTATTGGTA  200

seq1  CAGTAGACTAGCTTAGAGTGGGTAATATAAAGACATGCTTAGAGTTTTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAGACTAGCTTAGAGTGGGTAATATAAAGACATGCTTAGAGTTTTAT  250

seq1  TTTGGTTCATAGGACTTTAAGTCCAAGACCATATAACCAAATGTGATTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTTCATAGGACTTTAAGTCCAAGACCATATAACCAAATGTGATTGG  300

seq1  CTTCTATTGAGAACATTGTGCTTGTTTTACCCACAGCAGAAAACAGAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTATTGAGAACATTGTGCTTGTTTTACCCACAGCAGAAAACAGAAAC  350

seq1  AAAAGTGACATCACAGAAACGTACAAAATGTCTACCACAAAGGGAGAAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTGACATCACAGAAACGTACAAAATGTCTACCACAAAGGGAGAAGC  400

seq1  CAGACACAAAGAAACAGTATGCTGCAAGGACTTAGAGTACTTGTGAGCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACACAAAGAAACAGTATGCTGCAAGGACTTAGAGTACTTGTGAGCAG  450

seq1  AAGGAGCTATTGAAGAACCTACTGACAGAGTAGCATGTGGTTAAGTATGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGCTATTGAAGAACCTACTGACAGAGTAGCATGTGGTTAAGTATGA  500

seq1  GGGTTGGCCCCTGTCTGTTCATAGCACTCTTTCCACCTAAGACACTGGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTGGCCCCTGTCTGTTCATAGCACTCTTTCCACCTAAGACACTGGAA  550

seq1  GATTAGAAAATAAGGGACAATGATCATCCATGTCCTAGAATAATGGGAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAGAAAATAAGGGACAATGATCATCCATGTCCTAGAATAATGGGAGG  600

seq1  TGGCCGCTGTGCCACTATAATATGAAATTTTTCCAAGGAAAAGTTTACAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCGCTGTGCCACTATAATATGAAATTTTTCCAAGGAAAAGTTTACAC  650

seq1  TTATTCCTCTCTATCATCTCCCACCCTCATCAAATGTCTGTGGAGATGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCCTCTCTATCATCTCCCACCCTCATCAAATGTCTGTGGAGATGTG  700

seq1  GAGAGATAGCTCACCGAGCATCGTGCTTGCTGTTCAAGGATGGAGAGTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGATAGCTCACCGAGCATCGTGCTTGCTGTTCAAGGATGGAGAGTGG  750

seq1  AGTTTAGATCCTTGTAACATACATATAAACAAGTGGGACTGTCAGCACAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTAGATCCTTGTAACATACATATAAACAAGTGGGACTGTCAGCACAT  800

seq1  TCTCATATCACACATCATGTGTGGGGAGCGGGTGTGGCGGCAGTCCCAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATATCACACATCATGTGTGGGGAGCGGGTGTGGCGGCAGTCCCAAA  850

seq1  GGCGCCAGGGACTGCAGCTAAGTCATATGACTTGCACC-TGACTTCCTCA  899
      |||||||||||||||||||||||||||||||||||||| |||||| ||||
seq2  GGCGCCAGGGACTGCAGCTAAGTCATATGACTTGCACCTTGACTTTCTCA  900

seq1  TATAA-GAC-ACAAACATCTTGAGTGCTGCGCAGGT-GTACCAGGATACA  946
      ||||| ||| | |||||||||||||||||||||||| |||||||||||||
seq2  TATAAGGACTAAAAACATCTTGAGTGCTGCGCAGGTGGTACCAGGATACA  950

seq1  GGTGAATCCAATTTGGTGGAGATTTGCCCTTGCTGCCCTGATTAGCTGAA  996
      ||||||||||| |||||||||  |||||||||||||||||| |||||| |
seq2  GGTGAATCCAA-TTGGTGGAGGATTGCCCTTGCTGCCCTGA-TAGCTGGA  998

seq1  GCCTCGTGACTGGCGAGGGGGCGTGGCCTGCAGTGCGTGGATGAGAGAGA  1046
      |||||||||||||||||||| | |||||||   ||||||||||| | |||
seq2  GCCTCGTGACTGGCGAGGGGAC-TGGCCTGTCATGCGTGGATGATA-AGA  1046

seq1  GTATAAAAGGAGT  1059
      |||| ||||||||
seq2  GTAT-AAAGGAGT  1058

seq1: chr14_101396931_101397447
seq2: B6Ng01-011G18.g_64_580 (reverse)

seq1  CACCTCCCCACCCCTAAACCTCTTCCTCATCCCAGGCATTTAGCACACAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCCCCACCCCTAAACCTCTTCCTCATCCCAGGCATTTAGCACACAG  50

seq1  AGAAGTTAAACCTCAGCACAAGCAAAATGTCAGAAGGCTCAGTTTCAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTTAAACCTCAGCACAAGCAAAATGTCAGAAGGCTCAGTTTCAGAA  100

seq1  TGTAATACTTGTAACTTGCCTTAAAGAAGACCTTATGCTGAGAAATACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATACTTGTAACTTGCCTTAAAGAAGACCTTATGCTGAGAAATACTG  150

seq1  TGCTATATTGTGTGTTGCTGAGCTTCTGAATAACATTTGAATAGTCATCG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATATTGTGTGTTGCTGAGCTTCTGAATAACATTTGAATAGTCATCG  200

seq1  TCTTCCATTGGCCAATCATTCTTTTGGCAGTGGCCCCTTTGGAAACTGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCATTGGCCAATCATTCTTTTGGCAGTGGCCCCTTTGGAAACTGAA  250

seq1  ATAGCTCCATATTGTTATGACTACATTCCAGTCATGAAATAAACATAGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCTCCATATTGTTATGACTACATTCCAGTCATGAAATAAACATAGAT  300

seq1  TCTGACCTAGAAGAGCAAAGAGTTTCTGAAAAATATCATTATGGAGCAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACCTAGAAGAGCAAAGAGTTTCTGAAAAATATCATTATGGAGCAAT  350

seq1  TCACAGAGTCCAGGGACGTAATAGAATAAAAGAAACTATAAAGCTATATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGAGTCCAGGGACGTAATAGAATAAAAGAAACTATAAAGCTATATT  400

seq1  TTTCTGCGTAGTTCATTTTCTCCATTCAGATACCAGTACTGTGCAGGAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGCGTAGTTCATTTTCTCCATTCAGATACCAGTACTGTGCAGGAGA  450

seq1  GACTCAACTCCAAAGCATCTGCCTTTCCCCAAACAGTCTTGATGCATCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCAACTCCAAAGCATCTGCCTTTCCCCAAACAGTCTTGATGCATCCA  500

seq1  TTAAATTAATGGAATTC  517
      |||||||||||||||||
seq2  TTAAATTAATGGAATTC  517