BAC Information

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BAC

Clone NameB6Ng01-011L22
Chromosome14 (Build37)
Map Location 8,163,243 - 8,164,294
singlet/doubletsinglet
Overlap geneEG545013
Upstream geneLOC100042000, EG666874, B930046C15Rik, LOC100041600, LOC100041958, LOC100041964, LOC546590, LOC666906, LOC100042024, LOC100041664, LOC100042077, LOC100041675, LOC666329, EG666833, LOC100042043, EG666918, LOC100041700, LOC100042054, LOC100042100, EG622781, LOC100041740, LOC100038847, LOC100042129, LOC100041770, LOC100042149, LOC544988, EG626456, LOC100041791, LOC100042164, LOC100042182, LOC100041808, LOC100042192, LOC100042207, EG432817, LOC100042217, LOC100041830, LOC100042235
Downstream geneEG666947, LOC623215, LOC100042286, LOC666957, LOC100042263, LOC100042258, LOC100042272, LOC100041874, LOC100042304, LOC100041881, LOC100042312, LOC100041893, ENSMUSG00000058570, EG666976, Flnb, Dnase1l3, Abhd6, Rpp14, Pxk, Pdhb, Kctd6, Acox2, BC055107
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-011L22.bB6Ng01-011L22.g
ACCDH847042DH847043
length1,1801,050
definitionDH847042|Mus musculus domesticus DNA, BAC clone: B6Ng01-011L22, 5' end.DH847043|Mus musculus domesticus DNA, BAC clone: B6Ng01-011L22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcgtttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtaaatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaag
gacgcagatgtagctgtctcttgtgagactatgccggggcccagcaaaca
cagaagtggatgctcacagtcagctaatggatggatcatatggctcccaa
tggaggagctagagaagtagccaaggagctaaagggatctgcaccctata
gtggaacaacattatgagctacccagtactccggagctcttgactctagc
tgcatatatataaagaatggtctagtcgtcatcactgtagaaaggcccat
tggactgcaactttataggtctcagtataggcaattcaaggtcatacgtg
ggatggtgtgtgtcacagtggaatgggtga
gaattcccagaggacacaactagtatttacaggagaaaggctttatcaca
cctcctcccccaggagattcccatgtgacaccaaggaaacaccaggaaga
aacttccctggtgatcactttggacctctatggactcacactaacaggaa
atgcaaactgtgcatcacacaaatcctcagaccccatcaaaggtcccaga
gtctcagtcctgaacaaaacacacacagctaagttcacacacatagacac
aattagaatgccaaataaatccagggaggttccatctctcagaatataat
gaacaatatcagagtaaacgtgtgatagcctgcaggcattgcatacacac
agagagacagtaagtatgagcaggtccttccagctgttgacagcaacaat
cagattgcaagcaccccaaggtcaagtacataagaagatgataataaaca
cagagcactttgtttatccaacaattaaacacctgtcagggctacttaat
tgaatgatgggagatgacacactccattcatggaaggaaattgggttaac
agatggcacaatacaggcaacagggtactgggaataattcctacctgtag
ttcaaatcctcatacatgtaaacgttcaggattccacacatttcctccat
gtcattgctgatcttcctcatatgcaatttcagttctctaactttattta
tatttaatatctgattagtgatgttgtaattttgggttgaagtatttcta
gcagaccctgcagatagataaacacaaatgagtttgcgtacttgatggcc
caggggaggggagaccattcagagtcccaagaagaagactgagggagaga
aaaggtaaagacagggtgaatctctaaaagagcagaaaagctatcttcca
gctggtttgctaagctatgtcctcttcctaaccaccaatgtcagacatat
gccacacttccctgtacaggacccttgcctgaaatctataagctgcctca
gacataagatatgaggaacattgtcaggtcctatcagatgtgtttgcagg

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_8163243_8164294
seq2: B6Ng01-011L22.g_68_1117

seq1  GAATTCCCAGAGGACACAACTAGTATTTACAGGAGAATGGCTTTATCACA  50
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GAATTCCCAGAGGACACAACTAGTATTTACAGGAGAAAGGCTTTATCACA  50

seq1  CCTCCTCCCCCAGGAGATTCCCATGTGACACCAAGGAAACACCAGGAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTCCCCCAGGAGATTCCCATGTGACACCAAGGAAACACCAGGAAGA  100

seq1  AACTTCCCTGGTGATCACTTTGGACCTCTATGGACTCACACTAACAGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCCCTGGTGATCACTTTGGACCTCTATGGACTCACACTAACAGGAA  150

seq1  ATGCAAACTGTGCATCACACAAATCCTCAGACCCCATCAAAGGTCCCAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAAACTGTGCATCACACAAATCCTCAGACCCCATCAAAGGTCCCAGA  200

seq1  GTCTCAGTCCTGAACAAAACACACACAGCTAAGTTCACACACATAGACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCAGTCCTGAACAAAACACACACAGCTAAGTTCACACACATAGACAC  250

seq1  AATTAGAATGCCAAATAAATCCAGGGAGGTTCCATCTCTCAGAATATAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGAATGCCAAATAAATCCAGGGAGGTTCCATCTCTCAGAATATAAT  300

seq1  GAACAATATCAGAGTAAACGTGTGTTAGCCTGCAGGCATTGCATACACAC  350
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GAACAATATCAGAGTAAACGTGTGATAGCCTGCAGGCATTGCATACACAC  350

seq1  AGAGAGACAGTAAGTATGAGCAGGTCCTTCCAGCTGTTGACAGCAACAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGACAGTAAGTATGAGCAGGTCCTTCCAGCTGTTGACAGCAACAAT  400

seq1  CAGATTGCAAGCACCCCAAGGTCAAGTACATAAGAAGATGATAATAAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTGCAAGCACCCCAAGGTCAAGTACATAAGAAGATGATAATAAACA  450

seq1  CAGAGCACTTTGTTTATCCAACAATTAAACACCTGTCAGGGCTACTTAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCACTTTGTTTATCCAACAATTAAACACCTGTCAGGGCTACTTAAT  500

seq1  TGAATGATGGGAGATGACACACTCCATTCATGGAAGGAAATTGGGTTAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGATGGGAGATGACACACTCCATTCATGGAAGGAAATTGGGTTAAC  550

seq1  AGATGGCACAATACAGGCAACAGGGTACTGGGAATAATTCCTACCTGTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGCACAATACAGGCAACAGGGTACTGGGAATAATTCCTACCTGTAG  600

seq1  TTCAAATCCTCATACATGTAAACGTTCAGGATTCCACACATTTCCTCCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAATCCTCATACATGTAAACGTTCAGGATTCCACACATTTCCTCCAT  650

seq1  GTCATTGCTGATCTTCCTCATATGCAATTTCAGTTCTCTAACTTTATTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTGCTGATCTTCCTCATATGCAATTTCAGTTCTCTAACTTTATTTA  700

seq1  TATTTAATATCTGATTAGTGATGTTGTAATTTTGGGTTGAAGTATTTCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAATATCTGATTAGTGATGTTGTAATTTTGGGTTGAAGTATTTCTA  750

seq1  GCAGACCCTGCAGATAGATAAACACAAATGAGTTTGCGTACTTGATGGCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGACCCTGCAGATAGATAAACACAAATGAGTTTGCGTACTTGATGGCC  800

seq1  CAGGGGAGGGGAGACCATTCAGAGTCCCAAGAAGAAGACTGAGGGAGAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGGAGGGGAGACCATTCAGAGTCCCAAGAAGAAGACTGAGGGAGAGA  850

seq1  AAAGGTAAAGACAGGGTGAATCCCTAAAAGAGCAGAAAAGCTATCTTCCA  900
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AAAGGTAAAGACAGGGTGAATCTCTAAAAGAGCAGAAAAGCTATCTTCCA  900

seq1  GCTGGTTTGCTAAGCTATGTCCTCTTCCTAACCACCAATGTCAGACATAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTTTGCTAAGCTATGTCCTCTTCCTAACCACCAATGTCAGACATAT  950

seq1  GCCACAC-TCCCTGTTACAGGACCCCTTGCCCTGAAATCTATAAGCTGCC  999
      ||||||| |||||| ||||||| |||||| ||||||||||||||||||||
seq2  GCCACACTTCCCTG-TACAGGA-CCCTTG-CCTGAAATCTATAAGCTGCC  997

seq1  TCAGACATAAAGATATGAGGAACATTGTCAGGTCATATCAGATGTG-TTG  1048
      |||||||| ||||||||||||||||||||||||| ||||||||||| |||
seq2  TCAGACAT-AAGATATGAGGAACATTGTCAGGTCCTATCAGATGTGTTTG  1046

seq1  CAGG  1052
      ||||
seq2  CAGG  1050