BAC Information

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BAC

Clone NameB6Ng01-013L18
Chromosome14 (Build37)
Map Location 61,850,054 - 62,030,943
singlet/doubletdoublet
Overlap geneSacs, Sgcg, Arl11, EG432864, Ebpl, Kpna3
Upstream geneNupl1, Mtmr6, 2600011E07Rik, Ppia-ps14_696.1, EG628836, Spata13, C1qtnf9, Mipep, LOC100043586, Tnfrsf19
Downstream geneLOC100042933, EG432865, 6330409N04Rik, LOC100042941, Trim13, Kcnrg, LOC668253, Dleu7, Rnaseh2b, Gucy1b2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-013L18.bB6Ng01-013L18.g
ACCDH848477DH848478
length1,0951,039
definitionDH848477|Mus musculus domesticus DNA, BAC clone: B6Ng01-013L18, 5' end.DH848478|Mus musculus domesticus DNA, BAC clone: B6Ng01-013L18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(61,850,054 - 61,851,147)(62,029,891 - 62,030,943)
sequence
gaattccccaagagctttgctgacttagcacacattcatcttgatccacc
agcaagaatagattggtggtaccaacacactctgacgcatcaggaggaga
cagacagacctagtgacaacttacatgcagctagtacaaaaatggccact
aagtcaagaaagccattgtttcctatacaggtggccctgagcttttaagg
tgctatgctccaataaccatgtcataaactgataatatcccaagtggaag
atacattgaatctacccaacataacacccatgccgtctcagtagcctagc
tgctgtgtactgaggtggttcaatcctatgtgatccaagggctgactagc
aggtgtagcgttggccactgtagctgtccagccataagaatgggaccaca
tagtgccagaccaggaaaatatctgcattaaaacttccagttactttcta
cttactttttgtgtagcccaagtctcaaattcatgatcttctactactga
gtattgggaccacaggcgcatgcccctccctgcacctgctttaatttatt
atcattggtttcctagtatcttttaggaataaaaaggaagccagaacact
gcttctgtgacaaaggctgcaatactaggtcatcactttgcatgtgtttg
ggaatgatgcatatgttgcataaaattgtatatcaggggatgagtctacc
tcctgctaacactatgagagaatattgctcctgcaggcttgcctattcgt
gcagaaaaattcaggaagtggcttaattacacctgtctgcttatacctct
agtctttcagaagcacagcaagtgagtttacaacgggttctgaacatggt
tttcatagaattgttttttctgctgaaggcgagccctgtgagcatttgat
tccactcaagcaaaggagaagctgttatgtagacacatggggtagccaag
taccgggcataatgggactaatgccagacgtgattgtacagagaagatct
tgtcagtcgttggctacagcgactggaaagagaatgaagaagaagaaagg
tgggtgagctcttaagagggcctccatccttcgaaatcaacagaa
gaattctgtcattccttctttgatacaattctgagtttgaagataaaatg
ttcttttaggaggttgatgtctcattgccctatgtatggctttcatctct
cttcagaagtagctttgtaatgaataccatgaaacatgaatgcttgtttg
gtggaggccttacagggcaccagcacaaaataacaccatgcagttaattc
ctacctatggctactgcagagggcaggtttgtgtccttatacagtccgca
aagccaaattgaatttggaaattcttttgcctttcacctccctttcctca
agtaagacttaaaaacttgagttataatgcttgggaaacagttgatagat
caaggaacacatataatgtgactgcttatgttgtttattgaggtacagtt
tttattccatactctaggactgtagtattagtttggatttagttagctta
caggtatgtgacttgtgtgtggtctagtcttttctgaagtggtgggttta
ttttcagtgtggattcttcggctgtgttcatcagaggcttctgatgccag
aaccacctgaaagtttgtgctaacactatgctttcaactttttctctctc
ctttttttttcctcaccagtttttattaagggccaatagtttttaaaaga
taaaattgttaataaacaagaccaataaatatataataaaatttataaag
cccacttacaggcaaaaaaaaaaaaaaaaaaacccaaaaaacaaaacaag
acaggttttggaaatagtttgtttcactccaactccttttagagtccttt
tccctggtgccctgtatcctgatgtgtgcttgttttgactttattattag
gttgcatctttcttctcactctttttttaaatgctgtttttttgtttttt
gttttgtttgggacagggtttctctcagcatagcctaggcctgtctagaa
ctctcctggagactaagctgattcttactctgctcgagtgctgggctaaa
gtgggggtcatcatcacacccggctcgttcttgactcca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_61850054_61851147
seq2: B6Ng01-013L18.b_46_1140

seq1  GAATTCCCCAAGAGCTTTGCTGACTTAGCACACATTCATCTTGATCCACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCCAAGAGCTTTGCTGACTTAGCACACATTCATCTTGATCCACC  50

seq1  AGCAAGAATAGATTGGTGGTACCAACACACTCTGACGCATCAGGAGGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGAATAGATTGGTGGTACCAACACACTCTGACGCATCAGGAGGAGA  100

seq1  CAGACAGACCTAGTGACAACTTACATGCAGCTAGTACAAAAATGGCCACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAGACCTAGTGACAACTTACATGCAGCTAGTACAAAAATGGCCACT  150

seq1  AAGTCAAGAAAGCCATTGTTTCCTATACAGGTGGCCCTGAGCTTTTAAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCAAGAAAGCCATTGTTTCCTATACAGGTGGCCCTGAGCTTTTAAGG  200

seq1  TGCTATGCTCCAATAACCATGTCATAAACTGATAATATCCCAAGTGGAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATGCTCCAATAACCATGTCATAAACTGATAATATCCCAAGTGGAAG  250

seq1  ATACATTGAATCTACCCAACATAACACCCATGCCGTCTCAGTAGCCTAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATTGAATCTACCCAACATAACACCCATGCCGTCTCAGTAGCCTAGC  300

seq1  TGCTGTGTACTGAGGTGGTTCAATCCTATGTGATCCAAGGGCTGACTAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTGTACTGAGGTGGTTCAATCCTATGTGATCCAAGGGCTGACTAGC  350

seq1  AGGTGTAGCGTTGGCCACTGTAGCTGTCCAGCCATAAGAATGGGACCACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTAGCGTTGGCCACTGTAGCTGTCCAGCCATAAGAATGGGACCACA  400

seq1  TAGTGCCAGACCAGGAAAATATCTGCATTAAAACTTCCAGTTACTTTCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGCCAGACCAGGAAAATATCTGCATTAAAACTTCCAGTTACTTTCTA  450

seq1  CTTACTTTTTGTGTAGCCCAAGTCTCAAATTCATGATCTTCTACTACTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTTTTTGTGTAGCCCAAGTCTCAAATTCATGATCTTCTACTACTGA  500

seq1  GTATTGGGACCACAGGCGCATGCCCCTCCCTGCACCTGCTTTAATTTATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTGGGACCACAGGCGCATGCCCCTCCCTGCACCTGCTTTAATTTATT  550

seq1  ATCATTGGTTTCCTAGTATCTTTTAGGAATAAAAAGGAAGCCAGAACACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTGGTTTCCTAGTATCTTTTAGGAATAAAAAGGAAGCCAGAACACT  600

seq1  GCTTCTGTGACAAAGGCTGCAATACTAGGTCATCACTTTGCATGTGTTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTGTGACAAAGGCTGCAATACTAGGTCATCACTTTGCATGTGTTTG  650

seq1  GGAATGATGCATATGTTGCATAAAATTGTATATCAGGGGATGAGTCTACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGATGCATATGTTGCATAAAATTGTATATCAGGGGATGAGTCTACC  700

seq1  TCCTGCTAACACTATGAGAGAATATTGCTCCTGCAGGCTTGCCTATTCGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCTAACACTATGAGAGAATATTGCTCCTGCAGGCTTGCCTATTCGT  750

seq1  GCAGAAAAATTCAGGAAGTGGCTTAATTACACCTGTCTGCTTATACCTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAAAATTCAGGAAGTGGCTTAATTACACCTGTCTGCTTATACCTCT  800

seq1  AGTCTTTCAGAAGCACAGCAAGTGAGTTTACAACGGGTTCTGAACATGGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTTCAGAAGCACAGCAAGTGAGTTTACAACGGGTTCTGAACATGGT  850

seq1  TTTCATAGAATTGTTTTTTCTGCTGAAGGCGAGCCCTGTGAGCATTTGAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATAGAATTGTTTTTTCTGCTGAAGGCGAGCCCTGTGAGCATTTGAT  900

seq1  TCCACTCAAGCAAAGGAGAAGCTGTTATGTAGACACATGGGGTAGCCAAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTCAAGCAAAGGAGAAGCTGTTATGTAGACACATGGGGTAGCCAAG  950

seq1  TACCGGGCATAATGGGACTAATGCCAGACGTGGATTGTACAGAG-AGATC  999
      ||||||||||||||||||||||||||||||| |||||||||||| |||||
seq2  TACCGGGCATAATGGGACTAATGCCAGACGT-GATTGTACAGAGAAGATC  999

seq1  -TGTCAGCCGTTGGCTACAGCGACTGGAAAGAG-ATGAAGAAGAAAGAAG  1047
       |||||| ||||||||||||||||||||||||| |||||||||||  |||
seq2  TTGTCAGTCGTTGGCTACAGCGACTGGAAAGAGAATGAAGAAGAAGAAAG  1049

seq1  GTGGGTGAAGCTCTGAGGAAGGCCT-CATCCTTCAGATACAAACAGAA  1094
      ||||||| |||||| | || ||||| |||||||| || |  |||||||
seq2  GTGGGTG-AGCTCTTAAGAGGGCCTCCATCCTTC-GAAATCAACAGAA  1095

seq1: chr14_62029891_62030943
seq2: B6Ng01-013L18.g_68_1106 (reverse)

seq1  TGAAGTCAATGAAC-AGCCAGGTGTGATGATGTGACCCACCTTTAAACCC  49
      || |||||| |||| |||| ||||||||||  |||||| |  || | |||
seq2  TGGAGTCAA-GAACGAGCCGGGTGTGATGA--TGACCCCCACTTTAGCCC  47

seq1  AGCACTCAGGAGGCAGAGGTAGGAATCCAGCCTAGTCTACAGAGGGAGTT  99
      |||||||  || ||||| ||| |||| |||| |||||| ||| | |||||
seq2  AGCACTC--GA-GCAGA-GTAAGAAT-CAGCTTAGTCTCCAG-GAGAGTT  91

seq1  CTAGGACA-GCCAAGGCTATGCAGAGAGAAACCCTGTACCAAACAAAAAC  148
      ||| |||| ||| ||||||||| |||||||||||||| ||||||||||  
seq2  CTA-GACAGGCCTAGGCTATGCTGAGAGAAACCCTGTCCCAAACAAAA--  138

seq1  AAAAAAACAAAAAAACAGCATTTTAAAAAAAGAGTGAGAGGAAAGATGCC  198
       ||||||||||||||||||| |||||||||||||||||| |||||||| |
seq2  CAAAAAACAAAAAAACAGCA-TTTAAAAAAAGAGTGAGAAGAAAGATG-C  186

seq1  AACCTAAGTATAAAGTCAAAAACAAGCACACATCAGGATACAGGGCACCA  248
      |||||||  |||||||| ||||||||||||||||||||||||||||||||
seq2  AACCTAATAATAAAGTC-AAAACAAGCACACATCAGGATACAGGGCACCA  235

seq1  GGGAAAAGGACTCTAAAAGGAGTTGGAGTGAAACAAACTATATCCAAAAC  298
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GGGAAAAGGACTCTAAAAGGAGTTGGAGTGAAACAAACTATTTCCAAAAC  285

seq1  CTGTCTTGTTTTGTTTTTTGGGTTTTTTTTTTTTTTTTTTTTGCCTGTAA  348
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CTGTCTTGTTTTGTTTTTTGGG-TTTTTTTTTTTTTTTTTTTGCCTGTAA  334

seq1  GTGGGCTTTATAAATTTTATTATATATTTATTGGTCTTGTTTATTAACAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGCTTTATAAATTTTATTATATATTTATTGGTCTTGTTTATTAACAA  384

seq1  TTTTATCTTTTAAAAACTATTGGCCCTTAATAAAAACTGGTGAGGAAAAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATCTTTTAAAAACTATTGGCCCTTAATAAAAACTGGTGAGGAAAAA  434

seq1  AAAAGGAGAGAGAAAAAGTTGAAAGCATAGTGTTAGCACAAACTTTCAGG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGAGAGAGAAAAAGTTGAAAGCATAGTGTTAGCACAAACTTTCAGG  484

seq1  TGGTTCTGGCATCAGAAGCCTCTGATGAACACAGCCGAAGAATCCACACT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTCTGGCATCAGAAGCCTCTGATGAACACAGCCGAAGAATCCACACT  534

seq1  GAAAATAAACCCACCACTTCAGAAAAGACTAGACCACACACAAGTCACAT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATAAACCCACCACTTCAGAAAAGACTAGACCACACACAAGTCACAT  584

seq1  ACCTGTAAGCTAACTAAATCCAAACTAATACTACAGTCCTAGAGTATGGA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTAAGCTAACTAAATCCAAACTAATACTACAGTCCTAGAGTATGGA  634

seq1  ATAAAAACTGTACCTCAATAAACAACATAAGCAGTCACATTATATGTGTT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAACTGTACCTCAATAAACAACATAAGCAGTCACATTATATGTGTT  684

seq1  CCTTGATCTATCAACTGTTTCCCAAGCATTATAACTCAAGTTTTTAAGTC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGATCTATCAACTGTTTCCCAAGCATTATAACTCAAGTTTTTAAGTC  734

seq1  TTACTTGAGGAAAGGGAGGTGAAAGGCAAAAGAATTTCCAAATTCAATTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTGAGGAAAGGGAGGTGAAAGGCAAAAGAATTTCCAAATTCAATTT  784

seq1  GGCTTTGCGGACTGTATAAGGACACAAACCTGCCCTCTGCAGTAGCCATA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTGCGGACTGTATAAGGACACAAACCTGCCCTCTGCAGTAGCCATA  834

seq1  GGTAGGAATTAACTGCATGGTGTTATTTTGTGCTGGTGCCCTGTAAGGCC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGGAATTAACTGCATGGTGTTATTTTGTGCTGGTGCCCTGTAAGGCC  884

seq1  TCCACCAAACAAGCATTCATGTTTCATGGTATTCATTACAAAGCTACTTC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCAAACAAGCATTCATGTTTCATGGTATTCATTACAAAGCTACTTC  934

seq1  TGAAGAGAGATGAAAGCCATACATAGGGCAATGAGACATCAACCTCCTAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAGAGATGAAAGCCATACATAGGGCAATGAGACATCAACCTCCTAA  984

seq1  AAGAACATTTTATCTTCAAACTCAGAATTGTATCAAAGAAGGAATGACAG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACATTTTATCTTCAAACTCAGAATTGTATCAAAGAAGGAATGACAG  1034

seq1  AATTC  1053
      |||||
seq2  AATTC  1039