BAC Information

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BAC

Clone NameB6Ng01-014C08
Chromosome14 (Build37)
Map Location 102,561,960 - 102,738,130
singlet/doubletdoublet
Overlap genenone
Upstream gene1700110M21Rik, LOC100043421, LOC382936, Tbc1d4, Commd6, Uchl3, Lmo7, LOC100043795, LOC545567
Downstream geneLOC669278, Kctd12, LOC668699, Irg1, Cln5, Fbxl3, LOC100043441, Phr1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-014C08.bB6Ng01-014C08.g
ACCDH848773DH848774
length9801,045
definitionDH848773|Mus musculus domesticus DNA, BAC clone: B6Ng01-014C08, 5' end.DH848774|Mus musculus domesticus DNA, BAC clone: B6Ng01-014C08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(102,737,141 - 102,738,130)(102,561,960 - 102,563,014)
sequence
gaattctgaggatccagccaataagcagcctttctgcgaggtctttgctt
cagatcctggattcaggctcctgattacacttcttctcctggtggactgt
aagctgtaagatgaaattaacccttccctcctcaggtggcttgggagcat
ggtacttactgcatccacagaaacaaagccaggttatactgggaaggaat
tctttcaggtataatccaaggagcccatatattgatgatatgaatattaa
tgagcagcgcttgtctctcctgcacttgatgagtgtgagactaattacta
ttagacagggttcatatagaaattactcactgcaccactgaatctccacc
attacacaggcaggcatgatgtatatctctataaagagagcaattgttgc
tagaaagttattttccactggtctttttgttttggcaaaaaaaaaaaagt
tgatatttattgtcttaaagatcagctaaactttgaaatgtatactcttc
agaagtcaagaacccccacaaaataccctgagaaccccacagttcccatg
ttgtggagggaaactgagaccgatgcagatagatacttatagctaaccat
tggactgaggtctgggacccctatgaaagagttagtggaaggattgaagg
aactgaaggggaaggcaactccatgagaagaacaacggtatcaactaaac
cagacccctcagacctcccagagactaagccaccaaccaaagcacataca
tgggctgatccttgggccctggcatacacgtagcagaggactgccttgtc
tggcctcagtgggagaggatgcatctaatcctgaagatgctccagggagt
ggatgcctaggggacatgagctgagagtgcatgggtagtgacagagttgg
gtatggggaacactcccctcagagcgtaggggagagagatggggtgaaga
atctctgcaggctacacatttgagttgtaa
gaattcttttaccacacataagaagaagagattatatgcacacacatggg
taagaaaatgtcatcctctttcttggagcacaaggaagaaatcaagagat
ttttggtgtcttgatgggtgaaaatgatgaggaagaaagcagaaggaagc
tgaaagtttgtttccagtttcattctctaagaataaaacacacacttcct
tttcattttgaatcactggttcagatagccatttatcttgataatataaa
agaaaagcatttaaaatatgtcacatttcaaatttttgcctaagtgatta
gtttctgctggttcggcattggtaaacataggaaagagatttggtggtaa
acattgtcagtgctataaatagtacaaaaaagcaacctgtggcttcttca
tggacataaatactgagaacctagcttttgcttgtcaaagtccaaacctg
tgtgcaccatggctatctgataaacaaaccactgtttccagcagctgaat
ttggttgaatctgactttatgtcaacatcgtgtggaaaaatgcattgtat
caaagataacatgtgcaaagtcacctagaaaatgacaaagtcaatcagtc
aaaattcaaaacctgagaatgtgagaatgatgattgtttatgggtttcca
cttataattcttcagtgattttggataattattacataggtgagaaggga
ctttgaggggaggggctaacatgggttccctaaggctcagtaagaatgtt
gaacacacgcagttcctgatagaatgggaaaataggtttcaaaacattca
gagccaatttttccaacttttcccatcatttacaaatgaaatcctggcac
atgcagtggcaagtagtgtcgagcccttactagggtcatttcctttctat
atatgcatggaaactgtccctgacttcacctggaccataactgaaaagag
ggaaatctgcatgccaatgggtgtcatcttttggacagctgatgaaagag
ttgtgtcatcttcagtggcgcattgactttgagtagcagacagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_102737141_102738130
seq2: B6Ng01-014C08.b_48_1027 (reverse)

seq1  TTACAACTCAAATGTTGGTAGCCCCTGCAAGAGATTCTTCACCCCATCCT  50
      |||||||||||||||  ||||  ||||| |||||||||||||||||| ||
seq2  TTACAACTCAAATGT--GTAG--CCTGC-AGAGATTCTTCACCCCAT-CT  44

seq1  CTCTCCCCTTACGCTCTGA-GGGAGTGTTCCCCATACCCCACCTCTGTCA  99
      |||||||| |||||||||| |||||||||||||||| |||| ||||||||
seq2  CTCTCCCC-TACGCTCTGAGGGGAGTGTTCCCCATA-CCCAACTCTGTCA  92

seq1  CCTACCCATGCACTCTCAGCTCATGTCCCCTAGGCATCCACCTCCCCTGG  149
       ||||||||||||||||||||||||||||||||||||||||   ||||||
seq2  -CTACCCATGCACTCTCAGCTCATGTCCCCTAGGCATCCAC--TCCCTGG  139

seq1  AGCATCTTCAGGATTAGATGCATCCTCTCCCACTGAGGCCAGACAAGGCA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCTTCAGGATTAGATGCATCCTCTCCCACTGAGGCCAGACAAGGCA  189

seq1  GTCCTCTGCTACGTGTATGCCAGGGCCCAAGGATCAGCCCATGTATGTGC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTCTGCTACGTGTATGCCAGGGCCCAAGGATCAGCCCATGTATGTGC  239

seq1  TTTGGTTGGTGGCTTAGTCTCTGGGAGGTCTGAGGGGTCTGGTTTAGTTG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTTGGTGGCTTAGTCTCTGGGAGGTCTGAGGGGTCTGGTTTAGTTG  289

seq1  ATACCGTTGTTCTTCTCATGGAGTTGCCTTCCCCTTCAGTTCCTTCAATC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCGTTGTTCTTCTCATGGAGTTGCCTTCCCCTTCAGTTCCTTCAATC  339

seq1  CTTCCACTAACTCTTTCATAGGGGTCCCAGACCTCAGTCCAATGGTTAGC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCACTAACTCTTTCATAGGGGTCCCAGACCTCAGTCCAATGGTTAGC  389

seq1  TATAAGTATCTATCTGCATCGGTCTCAGTTTCCCTCCACAACATGGGAAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGTATCTATCTGCATCGGTCTCAGTTTCCCTCCACAACATGGGAAC  439

seq1  TGTGGGGTTCTCAGGGTATTTTGTGGGGGTTCTTGACTTCTGAAGAGTAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGGTTCTCAGGGTATTTTGTGGGGGTTCTTGACTTCTGAAGAGTAT  489

seq1  ACATTTCAAAGTTTAGCTGATCTTTAAGACAATAAATATCAACTTTTTTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTCAAAGTTTAGCTGATCTTTAAGACAATAAATATCAACTTTTTTT  539

seq1  TTTTTGCCAAAACAAAAAGACCAGTGGAAAATAACTTTCTAGCAACAATT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGCCAAAACAAAAAGACCAGTGGAAAATAACTTTCTAGCAACAATT  589

seq1  GCTCTCTTTATAGAGATATACATCATGCCTGCCTGTGTAATGGTGGAGAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCTTTATAGAGATATACATCATGCCTGCCTGTGTAATGGTGGAGAT  639

seq1  TCAGTGGTGCAGTGAGTAATTTCTATATGAACCCTGTCTAATAGTAATTA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGGTGCAGTGAGTAATTTCTATATGAACCCTGTCTAATAGTAATTA  689

seq1  GTCTCACACTCATCAAGTGCAGGAGAGACAAGCGCTGCTCATTAATATTC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCACACTCATCAAGTGCAGGAGAGACAAGCGCTGCTCATTAATATTC  739

seq1  ATATCATCAATATATGGGCTCCTTGGATTATACCTGAAAGAATTCCTTCC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCATCAATATATGGGCTCCTTGGATTATACCTGAAAGAATTCCTTCC  789

seq1  CAGTATAACCTGGCTTTGTTTCTGTGGATGCAGTAAGTACCATGCTCCCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTATAACCTGGCTTTGTTTCTGTGGATGCAGTAAGTACCATGCTCCCA  839

seq1  AGCCACCTGAGGAGGGAAGGGTTAATTTCATCTTACAGCTTACAGTCCAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACCTGAGGAGGGAAGGGTTAATTTCATCTTACAGCTTACAGTCCAC  889

seq1  CAGGAGAAGAAGTGTAATCAGGAGCCTGAATCCAGGATCTGAAGCAAAGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGAAGAAGTGTAATCAGGAGCCTGAATCCAGGATCTGAAGCAAAGA  939

seq1  CCTCGCAGAAAGGCTGCTTATTGGCTGGATCCTCAGAATTC  990
      |||||||||||||||||||||||||||||||||||||||||
seq2  CCTCGCAGAAAGGCTGCTTATTGGCTGGATCCTCAGAATTC  980

seq1: chr14_102561960_102563014
seq2: B6Ng01-014C08.g_69_1113

seq1  GAATTCTTTTACCACACATAAGAAGAAGAGATTATATGCACACACATGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTACCACACATAAGAAGAAGAGATTATATGCACACACATGGG  50

seq1  TAAGAAAATGTCATCCTCTTTCTTGGAGCACAAGGAAGAAATCAAGAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAAATGTCATCCTCTTTCTTGGAGCACAAGGAAGAAATCAAGAGAT  100

seq1  TTTTGGTGTCTTGATGGGTGAAAATGATGAGGAAGAAAGCAGAAGGAAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGTGTCTTGATGGGTGAAAATGATGAGGAAGAAAGCAGAAGGAAGC  150

seq1  TGAAAGTTTGTTTCCAGTTTCATTCTCTAAGAATAAAACACACACTTCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGTTTGTTTCCAGTTTCATTCTCTAAGAATAAAACACACACTTCCT  200

seq1  TTTCATTTTGAATCACTGGTTCAGATAGCCATTTATCTTGATAATATAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATTTTGAATCACTGGTTCAGATAGCCATTTATCTTGATAATATAAA  250

seq1  AGAAAAGCATTTAAAATATGTCACATTTCAAATTTTTGCCTAAGTGATTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGCATTTAAAATATGTCACATTTCAAATTTTTGCCTAAGTGATTA  300

seq1  GTTTCTGCTGGTTCGGCATTGGTAAACATAGGAAAGAGATTTGGTGGTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTGCTGGTTCGGCATTGGTAAACATAGGAAAGAGATTTGGTGGTAA  350

seq1  ACATTGTCAGTGCTATAAATAGTACAAAAAAGCAACCTGTGGCTTCTTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGTCAGTGCTATAAATAGTACAAAAAAGCAACCTGTGGCTTCTTCA  400

seq1  TGGACATAAATACTGAGAACCTAGCTTTTGCTTGTCAAAGTCCAAACCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACATAAATACTGAGAACCTAGCTTTTGCTTGTCAAAGTCCAAACCTG  450

seq1  TGTGCACCATGGCTATCTGATAAACAAACCACTGTTTCCAGCAGCTGAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCACCATGGCTATCTGATAAACAAACCACTGTTTCCAGCAGCTGAAT  500

seq1  TTGGTTGAATCTGACTTTATGTCAACATCGTGTGGAAAAATGCATTGTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTGAATCTGACTTTATGTCAACATCGTGTGGAAAAATGCATTGTAT  550

seq1  CAAAGATAACATGTGCAAAGTCACCTAGAAAATGACAAAGTCAATCAGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGATAACATGTGCAAAGTCACCTAGAAAATGACAAAGTCAATCAGTC  600

seq1  AAAATTCAAAACCTGAGAATGTGAGAATGATGATTGTTTATGGGTTTCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTCAAAACCTGAGAATGTGAGAATGATGATTGTTTATGGGTTTCCA  650

seq1  CTTATAATTCTTCAGTGATTTTGGATAATTATTACATAGGTGAGAAGGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATAATTCTTCAGTGATTTTGGATAATTATTACATAGGTGAGAAGGGA  700

seq1  CTTTGAGGGGAGGGGCTAACATGGGTT-CCTAAGGCCTCAGTAAGAATGT  749
      ||||||||||||||||||||||||||| ||||||| ||||||||||||||
seq2  CTTTGAGGGGAGGGGCTAACATGGGTTCCCTAAGG-CTCAGTAAGAATGT  749

seq1  TGAACACACGCAGTTCCTGATAGAATGGGAAAATAGGTTTCAAAACATTC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACACACGCAGTTCCTGATAGAATGGGAAAATAGGTTTCAAAACATTC  799

seq1  AGAGCCAATTTTTCCAACTTTTCCCATCATTTACAAATGAAATCCTGGCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCAATTTTTCCAACTTTTCCCATCATTTACAAATGAAATCCTGGCA  849

seq1  CATGCAGTGGCAAGTAGTGTCGAGCCCTTACTAGGGTCATTTCCTTTCTA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCAGTGGCAAGTAGTGTCGAGCCCTTACTAGGGTCATTTCCTTTCTA  899

seq1  TAATATGCATGGAAACTGTCCCTGACTTCA-CTGGACCATTAACTGAAAA  948
      | |||||||||||||||||||||||||||| |||||||| ||||||||||
seq2  T-ATATGCATGGAAACTGTCCCTGACTTCACCTGGACCA-TAACTGAAAA  947

seq1  GAGGGAAATCTGCATGCCAAATGGGTGTCCATCTTTTTGGACAGCTGAGT  998
      |||||||||||||||||| ||||||||| |||| |||||||||||||| |
seq2  GAGGGAAATCTGCATGCC-AATGGGTGT-CATC-TTTTGGACAGCTGA-T  993

seq1  GACAGAGTTGTGTCATCTTCAAGTGCGCATTTGACTTTTGGAGTAGCAGG  1048
      || ||||||||||||||||||   ||||| ||||||||  ||||||||  
seq2  GAAAGAGTTGTGTCATCTTCAGTGGCGCA-TTGACTTT--GAGTAGCA--  1038

seq1  GACAGAA  1055
      |||||||
seq2  GACAGAA  1045