BAC Information

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BAC

Clone NameB6Ng01-014J12
Chromosome14 (Build37)
Map Location 86,722,039 - 86,903,509
singlet/doubletdoublet
Overlap geneLOC100043778, LOC100043310
Upstream geneLOC668603, LOC100043301, EG629815, LOC100043306
Downstream geneLOC100043311, Diap3, EG665324, Tdrd3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-014J12.bB6Ng01-014J12.g
ACCDH849091DH849092
length1,084849
definitionDH849091|Mus musculus domesticus DNA, BAC clone: B6Ng01-014J12, 5' end.DH849092|Mus musculus domesticus DNA, BAC clone: B6Ng01-014J12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(86,902,424 - 86,903,509)(86,722,039 - 86,722,883)
sequence
gaattcaccatgtacaccaggctggccttgaatgcagaactccccttgtc
tcttcctcccaagtgctgagattgaaggtatatgtcaccatggctggctc
taaagataaatagttagaatacactttggcaagacagggcctttacaaga
agaaaaagacctcccgaaaacagtgaaaggaatgcaagaatagaatgaag
acggtcagggggactgcaagaccaatgttggtgctggcaaaaaagccaaa
ggagtagatctgtggtgacttgatgttctgccgtgatgtgcagatttctg
agaggacaaataaaaaagagcttctaagaaaaaaaaagaagaccgtttgg
cctagaactactacagcatgcaaagatcatggtcccttagctgcctgcat
aacaacttcccacattaggaaagagagccaatagggagaaagcttccagt
tcagctccagcttgattttatcttctagttctgaagggcaaccaagaata
aacaagtgattgcgtgttctgctaatttactcatttaccatttggttatt
gaacacttactgaattcttgctaggatgatttatcgattatttctaaaca
ttgtttttgtttctgatttgcttttcaacaggtttatatgtacacaccca
ctaacgccccacaaagggtatctgcttgacatcctcatcaccaagggaca
actgtgttctttagattgtgagctacctgtatagcatgctaagaagttgg
ctatttcttccaaagtatgtcctttacacagcatgaacaaagaagaactc
tggaagacccatttcatgaaaggacagaatagagacaatgagatggtttt
ggagtctactattatagttcagtaaagtaaaggctgagaatctgacagta
agtgtggagatgagtaggcctgagtcgaactgtaagaattattggatttg
gttttgtacaggtagagatatgggaatggtggaaaagacgctgtcttgac
acccttgcaagattatgtggttgcagaattgtggattatttctattctgg
tcatctatagcgtccattttttttcatatggctc
gaattcatttccctatgattatcctgtttcggcattttagaattctcccg
atcccccttttctcccattttgtcacctaatttgaaactcatcagtggca
tagcttgaagattccagtaactgctttaaggaaggtttcacctgatgtct
catgaagttggaaaacattgcctgtactgcctggttagcagagacaatca
aacttaaattagaagttgttttcttttctagtcgaagggatttcatagac
gggccaggcatcggaagtgtgagaggcagctcagttcccaggagcagcag
tcacacaaacatccagaaaggaaagcctaaaaataagaactccttcctct
ccctggctgttttcatttcacacagattactctcggtgtgcataccccag
tgtcatctttgacttcctttcgcaggaaggtctgttttcaaaatttaaac
acaccggagctacaataaatctttgcaagctgacactgaagccttgggaa
caagtcactctgaaaactcggaaaggacaaaattccagtctgtgtgagac
caacttcaaaagtatttattttgtagggagataccaatctctctctctct
ctctctctctctctctctctctctctctctcacacacacacacacacaca
caaaattaaagtcatagtttgacatcctttgcctatgaagcttatgagtg
taatacaaacatgtgtacacacatacacacacagtcaaattcataatttg
ttatttcttttcttatgaagctatgagtgtaaatacacacactcagagcg
agagagagaagatgagagaaagcgagagagggagatagatagagagaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_86902424_86903509
seq2: B6Ng01-014J12.b_46_1129 (reverse)

seq1  GAGCCATAATAGAAAAAAAATGGACGC-ATAGATGAACAGAATAGAAATA  49
      ||||||||   |||||||||||||||| |||||||| |||||||||||| 
seq2  GAGCCATA--TGAAAAAAAATGGACGCTATAGATGACCAGAATAGAAAT-  47

seq1  AATACACAAATCTGCAACCACATAATCTTTGCAAGGGTGTCAAGAACAGC  99
      ||| ||||| ||||||||||||||||| |||||||||||||||| |||||
seq2  AATCCACAATTCTGCAACCACATAATC-TTGCAAGGGTGTCAAG-ACAGC  95

seq1  CTCTTTTCCAC--ATCCCATATCTCTTACCTGTACAAAACCAAATCCAAT  147
       ||||||||||   ||||||||||| ||||||||||||||||||||||||
seq2  GTCTTTTCCACCATTCCCATATCTC-TACCTGTACAAAACCAAATCCAAT  144

seq1  AATTCTTAACAGTTCGACTCAGGCCTACTCATCTCCACACTTACTGTCAG  197
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTT-ACAGTTCGACTCAGGCCTACTCATCTCCACACTTACTGTCAG  193

seq1  ATTCTCAGCC-TTACTTTACTGAACTATAATAGTAGACTCCAAAACCATC  246
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCAGCCTTTACTTTACTGAACTATAATAGTAGACTCCAAAACCATC  243

seq1  TCATTGTCTCTATTCTGTCC-TTCCTGAAATGGGTCTTCCAGAGTTCTTC  295
      |||||||||||||||||||| ||| |||||||||||||||||||||||||
seq2  TCATTGTCTCTATTCTGTCCTTTCATGAAATGGGTCTTCCAGAGTTCTTC  293

seq1  TTTGTTCATGCTGTGTAAAGGACATACTTTGGAAGAAATAGCCAACTTCT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTCATGCTGTGTAAAGGACATACTTTGGAAGAAATAGCCAACTTCT  343

seq1  TAGCATGCTATACAGGTAGCTCACAATCTAAAGAACACAGTTGTCCCTTG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATGCTATACAGGTAGCTCACAATCTAAAGAACACAGTTGTCCCTTG  393

seq1  GTGATGAGGATGTCAAGCAGATACCCTTTGTGGGGCGTTAGTGGGTGTGT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGAGGATGTCAAGCAGATACCCTTTGTGGGGCGTTAGTGGGTGTGT  443

seq1  ACATATAAACCTGTTGAAAAGCAAATCAGAAACAAAAACAATGTTTAGAA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATAAACCTGTTGAAAAGCAAATCAGAAACAAAAACAATGTTTAGAA  493

seq1  ATAATCGATAAATCATCCTAGCAAGAATTCAGTAAGTGTTCAATAACCAA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCGATAAATCATCCTAGCAAGAATTCAGTAAGTGTTCAATAACCAA  543

seq1  ATGGTAAATGAGTAAATTAGCAGAACACGCAATCACTTGTTTATTCTTGG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTAAATGAGTAAATTAGCAGAACACGCAATCACTTGTTTATTCTTGG  593

seq1  TTGCCCTTCAGAACTAGAAGATAAAATCAAGCTGGAGCTGAACTGGAAGC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCCTTCAGAACTAGAAGATAAAATCAAGCTGGAGCTGAACTGGAAGC  643

seq1  TTTCTCCCTATTGGCTCTCTTTCCTAATGTGGGAAGTTGTTATGCAGGCA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCCCTATTGGCTCTCTTTCCTAATGTGGGAAGTTGTTATGCAGGCA  693

seq1  GCTAAGGGACCATGATCTTTGCATGCTGTAGTAGTTCTAGGCCAAACGGT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAGGGACCATGATCTTTGCATGCTGTAGTAGTTCTAGGCCAAACGGT  743

seq1  CTTCTTTTTTTTTCTTAGAAGCTCTTTTTTATTTGTCCTCTCAGAAATCT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTTTTTTTTCTTAGAAGCTCTTTTTTATTTGTCCTCTCAGAAATCT  793

seq1  GCACATCACGGCAGAACATCAAGTCACCACAGATCTACTCCTTTGGCTTT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATCACGGCAGAACATCAAGTCACCACAGATCTACTCCTTTGGCTTT  843

seq1  TTTGCCAGCACCAACATTGGTCTTGCAGTCCCCCTGACCGTCTTCATTCT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCAGCACCAACATTGGTCTTGCAGTCCCCCTGACCGTCTTCATTCT  893

seq1  ATTCTTGCATTCCTTTCACTGTTTTCGGGAGGTCTTTTTCTTCTTGTAAA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTGCATTCCTTTCACTGTTTTCGGGAGGTCTTTTTCTTCTTGTAAA  943

seq1  GGCCCTGTCTTGCCAAAGTGTATTCTAACTATTTATCTTTAGAGCCAGCC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCTGTCTTGCCAAAGTGTATTCTAACTATTTATCTTTAGAGCCAGCC  993

seq1  ATGGTGACATATACCTTCAATCTCAGCACTTGGGAGGAAGAGACAAGGGG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGACATATACCTTCAATCTCAGCACTTGGGAGGAAGAGACAAGGGG  1043

seq1  AGTTCTGCATTCAAGGCCAGCCTGGTGTACATGGTGAATTC  1086
      |||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTGCATTCAAGGCCAGCCTGGTGTACATGGTGAATTC  1084

seq1: chr14_86722039_86722883
seq2: B6Ng01-014J12.g_65_913

seq1  GAATTCATTTCCCTATGATTATCCTGTTTCGGCATTTTAGAATTCTCCCG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTCCCTATGATTATCCTGTTTCGGCATTTTAGAATTCTCCCG  50

seq1  ATCCCCCTTTTCTCCCATTTTGTCACCTAATTTGAAACTCATCAGTGGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCCTTTTCTCCCATTTTGTCACCTAATTTGAAACTCATCAGTGGCA  100

seq1  TAGCTTGAAGATTCCAGTAACTGCTTTAAGGAAGGTTTCACCTGATGTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTGAAGATTCCAGTAACTGCTTTAAGGAAGGTTTCACCTGATGTCT  150

seq1  CATGAAGTTGGAAAACATTGCCTGTACTGCCTGGTTAGCAGAGACAATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAGTTGGAAAACATTGCCTGTACTGCCTGGTTAGCAGAGACAATCA  200

seq1  AACTTAAATTAGAAGTTGTTTTCTTTTCTAGTCGAAGGGATTTCATAGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTAAATTAGAAGTTGTTTTCTTTTCTAGTCGAAGGGATTTCATAGAC  250

seq1  GGGCCAGGCATCGGAAGTGTGAGAGGCAGCTCAGTTCCCAGGAGCAGCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCAGGCATCGGAAGTGTGAGAGGCAGCTCAGTTCCCAGGAGCAGCAG  300

seq1  TCACACAAACATCCAGAAAGGAAAGCCTAAAAATAAGAACTCCTTCCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACAAACATCCAGAAAGGAAAGCCTAAAAATAAGAACTCCTTCCTCT  350

seq1  CCCTGGCTGTTTTCATTTCACACAGATTACTCTCGGTGTGCATACCCCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGCTGTTTTCATTTCACACAGATTACTCTCGGTGTGCATACCCCAG  400

seq1  TGTCATCTTTGACTTCCTTTCGCAGGAAGGTCTGTTTTCAAAATTTAAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATCTTTGACTTCCTTTCGCAGGAAGGTCTGTTTTCAAAATTTAAAC  450

seq1  ACACCGGAGCTACAATAAATCTTTGCAAGCTGACACTGAAGCCTTGGGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCGGAGCTACAATAAATCTTTGCAAGCTGACACTGAAGCCTTGGGAA  500

seq1  CAAGTCACTCTGAAAACTCGGAAAGGACAAAATTCCAGTCTGTGTGAGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCACTCTGAAAACTCGGAAAGGACAAAATTCCAGTCTGTGTGAGAC  550

seq1  CAACTTCAAAAGTATTTATTTTGTAGGGAGATACCAATCTCTCTCTCTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTCAAAAGTATTTATTTTGTAGGGAGATACCAATCTCTCTCTCTCT  600

seq1  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATACACACACACACACACA  650
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACACA  650

seq1  CAAAATTAAAGTCATAGTTTGACATCCTTTGCTTATGAAGCTTATGAGTG  700
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CAAAATTAAAGTCATAGTTTGACATCCTTTGCCTATGAAGCTTATGAGTG  700

seq1  TAAATACAAACATGTGTACACACATACACACACAGTTAAAGTCATAATTT  750
      | |||||||||||||||||||||||||||||||||| ||| |||||||||
seq2  T-AATACAAACATGTGTACACACATACACACACAGTCAAATTCATAATTT  749

seq1  GTTA-TTCTTTTCTTATGAAGCTATGAATGTAAATACACACACACAGAGC  799
      |||| |||||||||||||||||||||| ||||||||||||||| ||||||
seq2  GTTATTTCTTTTCTTATGAAGCTATGAGTGTAAATACACACACTCAGAGC  799

seq1  GAGAGAGAGAAGAAGAGAGAAAGGGAGAGAGGGAGAGAGAGAGAGA----  845
      ||||||||||||| ||||||||| |||||||||||| ||| |||||    
seq2  GAGAGAGAGAAGATGAGAGAAAGCGAGAGAGGGAGATAGATAGAGAGAGA  849