BAC Information

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BAC

Clone NameB6Ng01-014P07
Chromosome14 (Build37)
Map Location 105,964,161 - 106,178,912
singlet/doubletdoublet
Overlap geneLOC620376
Upstream geneD130009I18Rik, LOC435420, Rbm26, LOC621103, LOC100043466, Ndfip2
Downstream geneLOC100043469, Spry2, EG621364, LOC212084, Trim52, LOC100043807, LOC100043476, LOC100043809, LOC668736, EG668738, EG668739, LOC621487, EG668743, LOC100043811, LOC621499, LOC100043814, EG668742, LOC668748
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-014P07.bB6Ng01-014P07.g
ACCDH849354DH849355
length1,0641,163
definitionDH849354|Mus musculus domesticus DNA, BAC clone: B6Ng01-014P07, 5' end.DH849355|Mus musculus domesticus DNA, BAC clone: B6Ng01-014P07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(106,177,839 - 106,178,912)(105,964,161 - 105,965,324)
sequence
gaattcagactcaacagattttaggcatctcttggaatcagaatgaaagc
tattttagccctgaattacataagacttggaattacataatacttcacgg
gcaatggttctgaaagcacttggaacctctgtgagacctgaagctattac
agccaaaggaaactctcggaacagagggaaccaagccagaaggaaccgga
aatgaggagcaagtctgacagagagctaccaagagcctacaaggagctga
caggatgcaaagattaagcaacagatttcatttttttcctctattttttt
ttcaattaaatttccccaggagtctgtggttttgagcattatacaatgta
gctgtgtttgagtacctcaaaataggaagaggcagggaattttaacactg
tcctgtgaagatcattaattagagctatagtatttactattttaggggct
catggaacatttagggtaatctaactctcaacttctgacagtgaaatgta
taaaagtgtaattacacacacacacacacacacacgagttctgccagggt
ttcaggagtcacataatttgtcccttgtcccttggtccaggtattaacct
tgattgagtacaaaccatgccagatattcagctaaatactttatctgact
caatcttcatgatcattatatgatacaaatatcttgatgcagtttggagg
ggttaaataacatgctctgtcttgcacagattgaatggaggagacaatat
taaaaccaaggcaggctatttttccagttctctgcattccttagttgcct
atggtcctcagcctagggttgaggctccctgagtcttctccctctcacag
ttgcatgttactggtgtcattattagttcaggtctaggttcggtagtcat
gctgatgaactttgctggtgtaacttcagggacctttctagagacacatc
ccacagcaaactctcgacttctggctcttacaatctttctgtctctctca
gtaagatcactgaagcccaaggaaaacagctctatacatgtcagtggttc
atccctgcaaacat
gaattcaagtcacccaagagagaggtaacaccctcttcttgcattcctcc
ctcagattttatgtggcatgacctgtggtttaggagcaggaaagctgtct
gcacagttacattcttactatttgaagtcggtagtatatctgcctttaag
ttcagacaatcaaagccgtcctgcaccttaggctccctaccactgtctac
ttttcctcctgaagtaatagtgagcatcaactctgagagacactgtttgt
accatgggttgaatatttgttccgtatctggtaatatcctgagagctttc
catacagtcttctttaacctatatagcccctttagctagcagctatcatg
ttccatttttccagaggatgaaatgggatcagaaattaagaaacatacct
agtcatttaagaaattaacatggactagcaaaggctcccagggtattagt
gatgagaaattgaactttttcactgtctccctaagtaagagtttcagtat
tacatttatgagtgataaaccgaataaaggtcagggtatgcatagacaca
cagtcaacttcttgtatatatcttagaacatctgaaatctcagctaatga
atggaacttcagtaaaatgccagctgagaatccccaggctgaagcacact
tcccaggttgagtcaactctacgaccatttttttcccctagtctttcata
tctaaaagttctgatgttaaacgacccacccaagtaaaaccacccttccc
ccacacacataaaataacaaattatttggggaataatttgcaattagtag
aataattatttgagatctaacctagcaatgcagttgatgaggaaacatgc
ccttttgtagatatctagtatactagactgtgagaaacggcgctaaggtc
aaactgctcaaagcgggtcacacaacggactgaagacagcagcaagaggg
actgtggagctgatgccgctccgcgagctgggcgtggaacgtggtgaaga
aatctgttgttatatgtctgtttgtatagattcacacttaaggcttggac
atgcttctatctaggaactcggtgtagaatatccgaagggggatgtaaat
tcctgcctggaccttgggtttttggacagagctctctctctcacacctgg
tcagcgtgagaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_106177839_106178912
seq2: B6Ng01-014P07.b_46_1109 (reverse)

seq1  ATGTTTTCAGGGATG-ACCACTGACATTGTATAAGAGCTGTTTTTCCTTG  49
      |||||| |||||||| |||||||||| ||||| ||||||| |||||||||
seq2  ATGTTTGCAGGGATGAACCACTGACA-TGTAT-AGAGCTG-TTTTCCTTG  47

seq1  GGCTTCAGTGATCTTTACTGAAGAGAGGACAGAAAGATTGTAAGAGCCAG  99
      ||||||||||||| |||||| ||||| |||||||||||||||||||||||
seq2  GGCTTCAGTGATC-TTACTG-AGAGA-GACAGAAAGATTGTAAGAGCCAG  94

seq1  AAGGTCGGAGAGTTTGCTGTGGGATTGTGTCTCCTAGAAAGGTCCCCTGA  149
      || ||| ||||||||||||||||| ||||||| |||||||||| ||||||
seq2  AA-GTC-GAGAGTTTGCTGTGGGA-TGTGTCT-CTAGAAAGGT-CCCTGA  139

seq1  AGTTACACCAGCAAAGTTTCATCAGCATGACTACCGAACCTAGACCTGAA  199
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AGTTACACCAGCAAAG-TTCATCAGCATGACTACCGAACCTAGACCTGAA  188

seq1  CT-ATAATGACACCAGTAACATGCAACTGTGAGAGGGAGAAGACTCAGGG  248
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATAATGACACCAGTAACATGCAACTGTGAGAGGGAGAAGACTCAGGG  238

seq1  AGCCTCAACCCTAGGCTGAGGACCATAGGCAACTAAGGAATGCAGAGAAC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCAACCCTAGGCTGAGGACCATAGGCAACTAAGGAATGCAGAGAAC  288

seq1  TGGAAAAATAGCCTGCCTTGGTTTTAATATTGTCTCCTCCATTCAATCTG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAAATAGCCTGCCTTGGTTTTAATATTGTCTCCTCCATTCAATCTG  338

seq1  TGCAAGACAGAGCATGTTATTTAACCCCTCCAAACTGCATCAAGATATTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAGACAGAGCATGTTATTTAACCCCTCCAAACTGCATCAAGATATTT  388

seq1  GTATCATATAATGATCATGAAGATTGAGTCAGATAAAGTATTTAGCTGAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCATATAATGATCATGAAGATTGAGTCAGATAAAGTATTTAGCTGAA  438

seq1  TATCTGGCATGGTTTGTACTCAATCAAGGTTAATACCTGGACCAAGGGAC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGGCATGGTTTGTACTCAATCAAGGTTAATACCTGGACCAAGGGAC  488

seq1  AAGGGACAAATTATGTGACTCCTGAAACCCTGGCAGAACTCGTGTGTGTG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGACAAATTATGTGACTCCTGAAACCCTGGCAGAACTCGTGTGTGTG  538

seq1  TGTGTGTGTGTGTAATTACACTTTTATACATTTCACTGTCAGAAGTTGAG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTAATTACACTTTTATACATTTCACTGTCAGAAGTTGAG  588

seq1  AGTTAGATTACCCTAAATGTTCCATGAGCCCCTAAAATAGTAAATACTAT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGATTACCCTAAATGTTCCATGAGCCCCTAAAATAGTAAATACTAT  638

seq1  AGCTCTAATTAATGATCTTCACAGGACAGTGTTAAAATTCCCTGCCTCTT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTAATTAATGATCTTCACAGGACAGTGTTAAAATTCCCTGCCTCTT  688

seq1  CCTATTTTGAGGTACTCAAACACAGCTACATTGTATAATGCTCAAAACCA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTTTGAGGTACTCAAACACAGCTACATTGTATAATGCTCAAAACCA  738

seq1  CAGACTCCTGGGGAAATTTAATTGAAAAAAAAATAGAGGAAAAAAATGAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTCCTGGGGAAATTTAATTGAAAAAAAAATAGAGGAAAAAAATGAA  788

seq1  ATCTGTTGCTTAATCTTTGCATCCTGTCAGCTCCTTGTAGGCTCTTGGTA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTTGCTTAATCTTTGCATCCTGTCAGCTCCTTGTAGGCTCTTGGTA  838

seq1  GCTCTCTGTCAGACTTGCTCCTCATTTCCGGTTCCTTCTGGCTTGGTTCC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCTGTCAGACTTGCTCCTCATTTCCGGTTCCTTCTGGCTTGGTTCC  888

seq1  CTCTGTTCCGAGAGTTTCCTTTGGCTGTAATAGCTTCAGGTCTCACAGAG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTTCCGAGAGTTTCCTTTGGCTGTAATAGCTTCAGGTCTCACAGAG  938

seq1  GTTCCAAGTGCTTTCAGAACCATTGCCCGTGAAGTATTATGTAATTCCAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCAAGTGCTTTCAGAACCATTGCCCGTGAAGTATTATGTAATTCCAA  988

seq1  GTCTTATGTAATTCAGGGCTAAAATAGCTTTCATTCTGATTCCAAGAGAT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTATGTAATTCAGGGCTAAAATAGCTTTCATTCTGATTCCAAGAGAT  1038

seq1  GCCTAAAATCTGTTGAGTCTGAATTC  1074
      ||||||||||||||||||||||||||
seq2  GCCTAAAATCTGTTGAGTCTGAATTC  1064

seq1: chr14_105964161_105965324
seq2: B6Ng01-014P07.g_67_1229

seq1  GAATTCAAGTCACCCAAGAGAGAGGTAACACCCTCTTCTTGCATTCCTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGTCACCCAAGAGAGAGGTAACACCCTCTTCTTGCATTCCTCC  50

seq1  CTCAGATTTTATGTGGCATGACCTGTGGTTTAGGAGCAGGAAAGCTGTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGATTTTATGTGGCATGACCTGTGGTTTAGGAGCAGGAAAGCTGTCT  100

seq1  GCACAGTTACATTCTTACTATTTGAAGTCGGTAGTATATCTGCCTTTAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGTTACATTCTTACTATTTGAAGTCGGTAGTATATCTGCCTTTAAG  150

seq1  TTCAGACAATCAAAGCCGTCCTGCACCTTAGGCTCCCTACCACTGTCTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGACAATCAAAGCCGTCCTGCACCTTAGGCTCCCTACCACTGTCTAC  200

seq1  TTTTCCTCCTGAAGTAATAGTGAGCATCAACTCTGAGAGACACTGTTTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTCCTGAAGTAATAGTGAGCATCAACTCTGAGAGACACTGTTTGT  250

seq1  ACCATGGGTTGAATATTTGTTCCGTATCTGGTAATATCCTGAGAGCTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGGGTTGAATATTTGTTCCGTATCTGGTAATATCCTGAGAGCTTTC  300

seq1  CATACAGTCTTCTTTAACCTATATAGCCCCTTTAGCTAGCAGCTATCATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACAGTCTTCTTTAACCTATATAGCCCCTTTAGCTAGCAGCTATCATG  350

seq1  TTCCATTTTTCCAGAGGATGAAATGGGATCAGAAATTAAGAAACATACCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATTTTTCCAGAGGATGAAATGGGATCAGAAATTAAGAAACATACCT  400

seq1  AGTCATTTAAGAAATTAACATGGACTAGCAAAGGCTCCCAGGGTATTAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATTTAAGAAATTAACATGGACTAGCAAAGGCTCCCAGGGTATTAGT  450

seq1  GATGAGAAATTGAACTTTTTCACTGTCTCCCTAAGTAAGAGTTTCAGTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGAAATTGAACTTTTTCACTGTCTCCCTAAGTAAGAGTTTCAGTAT  500

seq1  TACATTTATGAGTGATAAACCGAATAAAGGTCAGGGTATGCATAGACACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTATGAGTGATAAACCGAATAAAGGTCAGGGTATGCATAGACACA  550

seq1  CAGTCAACTTCTTGTATATATCTTAGAACATCTGAAATCTCAGCTAATGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCAACTTCTTGTATATATCTTAGAACATCTGAAATCTCAGCTAATGA  600

seq1  ATGGAACTTCAGTAAAATGCCAGCTGAGAATCCCCAGGCTGAAGCACACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAACTTCAGTAAAATGCCAGCTGAGAATCCCCAGGCTGAAGCACACT  650

seq1  TCCCAGGTTGAGTCAACTCTACGACCATTTTTTTCCCCTAGTCTTTCATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGGTTGAGTCAACTCTACGACCATTTTTTTCCCCTAGTCTTTCATA  700

seq1  TCTAAAAGTTCTGATGTTAAACGACCCACCCAAGTAAAACCACCCTTCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAAGTTCTGATGTTAAACGACCCACCCAAGTAAAACCACCCTTCCC  750

seq1  CCACACACATAAAATAACAAATTATTT-GGGAATAATTTGCAATTAGTAG  799
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CCACACACATAAAATAACAAATTATTTGGGGAATAATTTGCAATTAGTAG  800

seq1  AATAATTATTTGAGATCTAACCTAGCAATGCAGTTGATGAGGAAAACATG  849
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AATAATTATTTGAGATCTAACCTAGCAATGCAGTTGATGAGG-AAACATG  849

seq1  CCC-TTTGTAGATATCTAGTATACTAGACTGTGGAGAAACGGCGCTAAGG  898
      ||| |||||||||||||||||||||||||||| |||||||||||||||||
seq2  CCCTTTTGTAGATATCTAGTATACTAGACTGT-GAGAAACGGCGCTAAGG  898

seq1  TCAAAACTGCTCAAAGC-GGTCACACAACGGACTGAAAGACAGCAGCAAG  947
      || |||||||||||||| ||||||||||||||||| ||||||||||||||
seq2  TC-AAACTGCTCAAAGCGGGTCACACAACGGACTG-AAGACAGCAGCAAG  946

seq1  AGGGGACTGTGGAGCTGATGCCGCTCCGCGAGCTGGGCGTGGAACGTGGT  997
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  A-GGGACTGTGGAGCTGATGCCGCTCCGCGAGCTGGGCGTGGAACGTGGT  995

seq1  GAAGAAATCTGTTGTTATAATGTCATGTTTGTATAGATTCACACTT-AGG  1046
      |||||||||||||||||| ||||| ||||||||||||||||||||| |||
seq2  GAAGAAATCTGTTGTTAT-ATGTC-TGTTTGTATAGATTCACACTTAAGG  1043

seq1  CTTGGACATGCTTCTATTCTAGGAACTCG--GTAAGATAACC-AGAGGGG  1093
      |||||||||||||||| ||||||||||||  |||  ||| || |  ||||
seq2  CTTGGACATGCTTCTA-TCTAGGAACTCGGTGTAGAATATCCGAAGGGGG  1092

seq1  ATGGAAATTCCTGCCTGGA-CTTGGGTTTTTAGACA-AGCTTCCTCTCTT  1141
      ||| ||||||||||||||| ||||||||||| |||| ||||  ||||| |
seq2  ATGTAAATTCCTGCCTGGACCTTGGGTTTTTGGACAGAGCT--CTCTC-T  1139

seq1  CTCAACACCT-GTCA-CGTGAGAAA  1164
      ||| |||||| |||| |||||||||
seq2  CTC-ACACCTGGTCAGCGTGAGAAA  1163