BAC Information

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BAC

Clone NameB6Ng01-015M07
Chromosome14 (Build37)
Map Location 53,344,533 - 53,345,556
singlet/doubletsinglet
Overlap geneLOC627394
Upstream geneEar-ps3, Ang4, Ear-ps4, AY358078, Hn1l-ps1, Ear-ps5, Ear6, Mett11d1, Slc39a2, Ndrg2, Gm77, Rnase13, E130112L23Rik, Zfp219, G630016D24Rik, LOC100042276, Olfr221, LOC667348, LOC667352, Hnrpc, Rpgrip1, Supt16h, Chd8, Rab2b, Tox4, Mettl3, Sall2, Olfr1513, LOC193533, Olfr1512, Olfr1511, Olfr1510, OTTMUSG00000015242, Olfr1509, Olfr1508, Olfr1507, LOC671621, EG633692, LOC100042372, EG667441, LOC100042384, Trav5-1, EG667449, LOC671652, Trav6-2, LOC100042410, LOC546612
Downstream geneLOC100042419, Gm701, LOC382180, EG386506, LOC667476, LOC671927, LOC667481, LOC100042444, LOC640196, LOC627273, LOC100043177, LOC640931, EG627232, LOC100043186, LOC100042470, EG328482, LOC100042479, EG667525, LOC100043197, LOC100038850, LOC667542, EG667547, LOC100043214, EG667562, LOC100043202, LOC667574, Gm26, EG667583, Gm1489, C920008G01Rik, LOC667596, EG667604, LOC547329, LOC639655, LOC634322, EG636127, OTTMUSG00000015163, EG667626, LOC620297, LOC100042560, EG667635, LOC100043218, LOC100042568, LOC100043204, EG627424, LOC100043258, LOC100042574, LOC100042579, LOC100043269, LOC100043270, LOC100043274, EG667681, LOC100042593, EG193574, EG547424, LOC100042601, LOC100043282, A130082M07Rik, LOC100042607, LOC100042614, LOC100042621, LOC100043319, EG547328, LOC100043308, LOC328483, EG667765, EG630061, LOC630086, EG436467, LOC100043322, OTTMUSG00000015124, A430107P09Rik, OTTMUSG00000015049
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-015M07.bB6Ng01-015M07.g
ACCDH849937DH849938
length1,028690
definitionDH849937|Mus musculus domesticus DNA, BAC clone: B6Ng01-015M07, 5' end.DH849938|Mus musculus domesticus DNA, BAC clone: B6Ng01-015M07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcaacaaaggaatctcgaatggcccaaaagcacttaaagaatgt
tcaacatcctttgacatcagggaaatgtaaaacaaaaggaccatgagatt
tcaccttataccaatcagaatgtttctccacatccctgccaacatgtgtt
gttactttagattttgagtctttagattatgcagtggcccttgtttacgt
tctttagattgatgagggacacctgaaatctggtatgtgtcttataaatg
atctgaggacaagagcacatttttgactctggaaggtgttacaatagacc
ctagtttagtttctgtccaccagggggtggagtttcctaacacaagatcc
ttatctgtgtgaactctaagcttcataggttcatcatttgatgccatttc
atcatttcttcatgtgaaaagttgagaccatcactctggtgacactgaag
atgaacaattccccagctttagtgactgtgatgctgtttatacttggtaa
gtgaagtgacttaaaaagtgcactatttttccaattctcttggccccctg
ggcctctctcctgtttccctctatcccttatactgtgcctccttttccct
agccttcttcttttccattgaggaccctccttccctctgcttctcatgac
tattttattccccattctaagtgggatttaagcccccatggttgggcctt
tcttcttgtttaacttcttacggtctttgggggtgtatcatgggtattct
gcactttttggctaatatacactatcagtgagtaaacatcacgtatgtca
tttttgggttggggttacttcactcaggatgatattttctagatctatcc
atttgcctgcaaaatttatgatgtccttgatttttatagctgaatagcac
ttattgtgtaatgtaccacattttctgtatcttttttttgttgttgttaa
gggacatctgagtgcttccagtttctgactctatgactaaagctgctatg
aacatagtagagcacaagtcttggggta
gaattcacccttcagctctctacggtgctgttgctcccaagtccctctct
gtccttcggtggagtatattcactaaggttactctctgctagcaaagact
cttagtaacacagagcctgaactggccatcttctgtaaccagcaaagcct
caagtggagggactgggacaccaactcagcaaaacgacctttgaccaata
gcttttcctgcctgcagagtgttctgggaccagaccctagcaaaaccaac
atcaaagagactggaaactgttcatccagcaactgatggggacagatgta
gtcccacagccaaccatcgggcagcccagggagccctgcagaggagcagg
aggaaggatcagaggaaccagacgggtcagggacacagcccagagaatca
actgactgggattcatggggacttgcagagaccaggggggctgtaggtgt
ctcccctaggtcctctgcatgtatgttatggctgagtagcttagtattct
ttaggaatcctaacagtgacagcggggactgtccctgactcctttgcctg
cttctaagacccttttcctcctactgggttgctttgtccagtcttggtgt
gatggtatatgtctggtcttgttacaactgtgtttggttaatgtcacaga
agcccagctcttttctgaggggaggtgggagtgtggatct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_53344533_53345556
seq2: B6Ng01-015M07.b_47_1068

seq1  GAATTCTCAACAAAGGAATCTCGAATGGCCCAAAAGCACTTAAAGAATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAACAAAGGAATCTCGAATGGCCCAAAAGCACTTAAAGAATGT  50

seq1  TCAACATCCTTTGACATCAGGGAAATGTAAAACAAAAGGACCATGAGATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACATCCTTTGACATCAGGGAAATGTAAAACAAAAGGACCATGAGATT  100

seq1  TCACCTTATACCAATCAGAATGTTTCTCCACATCCCTGCCAACATGTGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTTATACCAATCAGAATGTTTCTCCACATCCCTGCCAACATGTGTT  150

seq1  GTTACTTTAGATTTTGAGTCTTTAGATTATGCAGTGGCCCTTGTTTACGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACTTTAGATTTTGAGTCTTTAGATTATGCAGTGGCCCTTGTTTACGT  200

seq1  TCTTTAGATTGATGAGGGACACCTGAAATCTGGTATGTGTCTTATAAATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTAGATTGATGAGGGACACCTGAAATCTGGTATGTGTCTTATAAATG  250

seq1  ATCTGAGGACAAGAGCACATTTTTGACTCTGGAAGGTGTTACAATAGACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAGGACAAGAGCACATTTTTGACTCTGGAAGGTGTTACAATAGACC  300

seq1  CTAGTTTAGTTTCTGTCCACCAGGGGGTGGAGTTTCCTAACACAAGATCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTTAGTTTCTGTCCACCAGGGGGTGGAGTTTCCTAACACAAGATCC  350

seq1  TTATCTGTGTGAACTCTAAGCTTCATAGGTTCATCATTTGATGCCATTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTGTGTGAACTCTAAGCTTCATAGGTTCATCATTTGATGCCATTTC  400

seq1  ATCATTTCTTCATGTGAAAAGTTGAGACCATCACTCTGGTGACACTGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTCTTCATGTGAAAAGTTGAGACCATCACTCTGGTGACACTGAAG  450

seq1  ATGAACAATTCCCCAGCTTTAGTGACTGTGATGCTGTTTATACTTGGTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACAATTCCCCAGCTTTAGTGACTGTGATGCTGTTTATACTTGGTAA  500

seq1  GTGAAGTGACTTAAAAAGTGCACTATTTTTCCAATTCTCTTGGCCCCCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGTGACTTAAAAAGTGCACTATTTTTCCAATTCTCTTGGCCCCCTG  550

seq1  GGCCTCTCTCCTGTTTCCCTCTATCCCTTATACTGTGCCTCCTTTTCCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTCTCTCCTGTTTCCCTCTATCCCTTATACTGTGCCTCCTTTTCCCT  600

seq1  AGCCTTCTTCTTTTCCATTGAGGACCCTCCTTCCCTCTGCTTCTCATGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTCTTCTTTTCCATTGAGGACCCTCCTTCCCTCTGCTTCTCATGAC  650

seq1  TATTTTATTCCCCATTCTAAGTGGGATTTAAGCCCCCATGGTTGGGCCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTATTCCCCATTCTAAGTGGGATTTAAGCCCCCATGGTTGGGCCTT  700

seq1  TCTTCTTGTTTAACTTCTTACGGTCTTTGGGGGTGTATCATGGGTATTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTGTTTAACTTCTTACGGTCTTTGGGGGTGTATCATGGGTATTCT  750

seq1  GCACTTTTTGGCTAATATACACTATCAGTGAGTAAACATCAGGTATGTCA  800
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GCACTTTTTGGCTAATATACACTATCAGTGAGTAAACATCACGTATGTCA  800

seq1  -TTTTGGGTTGGGGTTACTTCACTCAGGATGATATTTTCTAGATCTATCC  849
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGGGTTGGGGTTACTTCACTCAGGATGATATTTTCTAGATCTATCC  850

seq1  ATTTGCCTGCAAAATTTATGATGTCCTTGATTTTTATAGCTGAATAGCAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCCTGCAAAATTTATGATGTCCTTGATTTTTATAGCTGAATAGCAC  900

seq1  TTATTGTGTAAATGTACCACATTTTCTGTATCTTTTTTTTGTTGTTGTTA  949
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGTGT-AATGTACCACATTTTCTGTATCTTTTTTTTGTTGTTGTTA  949

seq1  AGGGACATCTGAGTTGCTTCCAGTTTCTGACTCTTATGACTAAAGCTGCT  999
      ||||||||||||| ||||||||||||||||||| ||||||||||||||||
seq2  AGGGACATCTGAG-TGCTTCCAGTTTCTGACTC-TATGACTAAAGCTGCT  997

seq1  ATGAACATAGTAGAGCACAAGTCCT  1024
      ||||||||||||||||||||||| |
seq2  ATGAACATAGTAGAGCACAAGTCTT  1022