BAC Information

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BAC

Clone NameB6Ng01-016I22
Chromosome14 (Build37)
Map Location 106,651,859 - 106,652,974
singlet/doubletsinglet
Overlap genenone
Upstream geneNdfip2, LOC620376, LOC100043469, Spry2, EG621364, LOC212084, Trim52
Downstream geneLOC100043807, LOC100043476, LOC100043809, LOC668736, EG668738, EG668739, LOC621487, EG668743, LOC100043811, LOC621499, LOC100043814, EG668742, LOC668748
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-016I22.bB6Ng01-016I22.g
ACCDH850488DH850489
length1,0921,143
definitionDH850488|Mus musculus domesticus DNA, BAC clone: B6Ng01-016I22, 5' end.DH850489|Mus musculus domesticus DNA, BAC clone: B6Ng01-016I22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaatactaagtaagcatggaaagatcttctatctcctaccacag
cgtcatgcatcccaaagacacaggcatgcactgtcaagaaagtatgctca
aaaccaggaacatttttatgtgtgttttaaagtgttctattaaaatcaaa
gaaccagaaagggagaataaaaattttccagtcaacattttcaatatgat
gtttgttcaacaaataaagagtgaggtcatactaggtaagccactgaggt
gggggcaggtggtgcatcatactgttcagggtatcaaatagcaaagcaaa
tgggagacatgccttcctagagtctgttctaggctggagatcccaaaaac
aagcactcatatactacaacatattatactatgtggctgtggacactgac
acaaagagccttaaatgctgtgccaaagaaactggagtttagggtatggg
cagttttacaacagtaaagtgactgcctccaggaaataatcttaaacccg
aagtaaaatgaagtgcaaggaatggggctggttatttggggaaattgaca
ttggaagaccagttccaaaacatcactgaaacgatgcacaacaagcaaga
ttctctgaagtgctttgctctggaaatgagaactttttttttcatgaaag
tttgaagagcttactagtgctattgtcaaatgaatgatgaagaattaacc
tgagtaagaagttatgaggttctcaagttgatatagaggaaatatcaatg
aaaaatgctcagtttgcctgaaaaaaggttaatatttcactgagaagtta
cttgcagaagttttagttacaactctaatattaattgtgataatagggaa
gcaaatatgaaaaatgtatatatttaaggaattggagaaaagatattaag
gcaaggcaaaaagctaaaaagcatcaagtattcctgcatgcaataaagcg
ttgaaaataataactgaatcagatattttgagagaaagtattcaataaat
cagcagcttcattagaccctacatctataacattatgacattactcatca
aacttgtttgcatctactttatttggtgatttattaatcgca
gaattcttcactaaacccatctggtcctgggctttttttttggttgggag
actattactgactgcttctatttcttttgggatataggactgtttagatc
attaatctgatcctgatttaactttggaacctggtatctgtctagaaact
tgtccatttcatccaggtattccagaatgttgagtatagccttttggaga
aggatctgatggtgttttggatttcttcaggatctgttcttatgtctccc
ttttcatttctgattttgttaattaggatgctgtccctgtgtcctctagt
gagtctggttaagggtttatctatcttgttgattttcgcaaagaatcagc
tccttgtttggttgattctttgaatagttcttcatgtttccacttggttg
atttcacccctgagtttgattatttcctgctgtctactcctcttgggtga
atttgcttccttttgttctagagcttttaggtgtgttgtctagctgctag
tgtgtgctctctctattttctttttggaggcactcagagctatgagtttt
cctcttagaaatgcttccattgtgtcctgtaagtttgggtatgttgtgac
ttcattttcattaaactctaaaaagtgtttaatttctttctttattcctt
tccttgaccaaggtatcattgagtagagagttgttcagtttccacgtgaa
tgttggctttctatcatttttattgtctttgaagatcagccttagtccat
ggtgatctgataggatgcagggggcaatttcagtatttttgtacctgttg
aggcctgttttgtgaccaattatatggtcaattttggagaaggtaccatg
aggtgctgagaagaacgtatatccttttgttttagataaaatgttctcta
gatacctgttaaattcatttgtttcataacttctgtagttcactgtgtcc
ctgttagtttctgtttccatgatctgtcatttatgaagtggttgttttga
agtctcccactatattgtgtgaggtgcaatgtgtgcttgagcttttatca
aaggtcttaatgaaggtggcggcccttgcattggagcataaatccgaatt
gagagtttcttctgaagattttacctttaggatgaggggccta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_106651859_106652974
seq2: B6Ng01-016I22.b_41_1132 (reverse)

seq1  TGCGATTTTTATTAAAATCAACAAAATAAAGTAGATGCAGACAAGTTTTG  50
      |||||||  |    ||||| || |||||||||||||||| ||||||||  
seq2  TGCGATTAAT----AAATC-ACCAAATAAAGTAGATGCAAACAAGTTT--  43

seq1  AATGAGTAAATGTCATAAATGTTATAGGAATGTAGGGTTCCTAATTGAAG  100
       |||||| |||||||| ||||||||||  |||||||||  |||| |||| 
seq2  GATGAGT-AATGTCAT-AATGTTATAG--ATGTAGGGT--CTAA-TGAA-  85

seq1  GCTGCTGATTTTATTTGAATACTTTTCTTCCTCAAAATATCTGATTCAGT  150
      |||||||||||   |||||||| |||||  ||||||||||||||||||| 
seq2  GCTGCTGATTT--ATTGAATAC-TTTCT--CTCAAAATATCTGATTCAG-  129

seq1  TTATTTATTTTTCAACGCCTTTATTGCATGCAGGAATACTTGATGCTTTT  200
      |||||   ||||||||| ||||||||||||||||||||||||||||||||
seq2  TTATT--ATTTTCAACG-CTTTATTGCATGCAGGAATACTTGATGCTTTT  176

seq1  TAGCTTTTTGCCTTGCCTTAATATCTTTTCTCCAATTCCTTAAATATATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTTTTGCCTTGCCTTAATATCTTTTCTCCAATTCCTTAAATATATA  226

seq1  CATTTTTCATATTTGCTTCCCTATTATCACAATTAATATTAGAGTTGTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTCATATTTGCTTCCCTATTATCACAATTAATATTAGAGTTGTAA  276

seq1  CTAAAACTTCTGCAAGTAACTTCTCAGTGAAATATTAACCTTTTTTCAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAACTTCTGCAAGTAACTTCTCAGTGAAATATTAACCTTTTTTCAGG  326

seq1  CAAACTGAGCATTTTTCATTGATATTTCCTCTATATCAACTTGAGAACCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTGAGCATTTTTCATTGATATTTCCTCTATATCAACTTGAGAACCT  376

seq1  CATAACTTCTTACTCAGGTTAATTCTTCATCATTCATTTGACAATAGCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAACTTCTTACTCAGGTTAATTCTTCATCATTCATTTGACAATAGCAC  426

seq1  TAGTAAGCTCTTCAAACTTTCATGAAAAAAAAAGTTCTCATTTCCAGAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAAGCTCTTCAAACTTTCATGAAAAAAAAAGTTCTCATTTCCAGAGC  476

seq1  AAAGCACTTCAGAGAATCTTGCTTGTTGTGCATCGTTTCAGTGATGTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCACTTCAGAGAATCTTGCTTGTTGTGCATCGTTTCAGTGATGTTTT  526

seq1  GGAACTGGTCTTCCAATGTCAATTTCCCCAAATAACCAGCCCCATTCCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTGGTCTTCCAATGTCAATTTCCCCAAATAACCAGCCCCATTCCTT  576

seq1  GCACTTCATTTTACTTCGGGTTTAAGATTATTTCCTGGAGGCAGTCACTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTTCATTTTACTTCGGGTTTAAGATTATTTCCTGGAGGCAGTCACTT  626

seq1  TACTGTTGTAAAACTGCCCATACCCTAAACTCCAGTTTCTTTGGCACAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTTGTAAAACTGCCCATACCCTAAACTCCAGTTTCTTTGGCACAGC  676

seq1  ATTTAAGGCTCTTTGTGTCAGTGTCCACAGCCACATAGTATAATATGTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAGGCTCTTTGTGTCAGTGTCCACAGCCACATAGTATAATATGTTG  726

seq1  TAGTATATGAGTGCTTGTTTTTGGGATCTCCAGCCTAGAACAGACTCTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTATATGAGTGCTTGTTTTTGGGATCTCCAGCCTAGAACAGACTCTAG  776

seq1  GAAGGCATGTCTCCCATTTGCTTTGCTATTTGATACCCTGAACAGTATGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCATGTCTCCCATTTGCTTTGCTATTTGATACCCTGAACAGTATGA  826

seq1  TGCACCACCTGCCCCCACCTCAGTGGCTTACCTAGTATGACCTCACTCTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACCACCTGCCCCCACCTCAGTGGCTTACCTAGTATGACCTCACTCTT  876

seq1  TATTTGTTGAACAAACATCATATTGAAAATGTTGACTGGAAAATTTTTAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGTTGAACAAACATCATATTGAAAATGTTGACTGGAAAATTTTTAT  926

seq1  TCTCCCTTTCTGGTTCTTTGATTTTAATAGAACACTTTAAAACACACATA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCTTTCTGGTTCTTTGATTTTAATAGAACACTTTAAAACACACATA  976

seq1  AAAATGTTCCTGGTTTTGAGCATACTTTCTTGACAGTGCATGCCTGTGTC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTTCCTGGTTTTGAGCATACTTTCTTGACAGTGCATGCCTGTGTC  1026

seq1  TTTGGGATGCATGACGCTGTGGTAGGAGATAGAAGATCTTTCCATGCTTA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGATGCATGACGCTGTGGTAGGAGATAGAAGATCTTTCCATGCTTA  1076

seq1  CTTAGTATTTGAATTC  1116
      ||||||||||||||||
seq2  CTTAGTATTTGAATTC  1092