BAC Information

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BAC

Clone NameB6Ng01-017A08
Chromosome14 (Build37)
Map Location 109,814,486 - 109,951,409
singlet/doubletdoublet
Overlap genenone
Upstream geneEG668761, Slitrk1
Downstream geneLOC640892
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-017A08.bB6Ng01-017A08.g
ACCDH850819DH850820
length736937
definitionDH850819|Mus musculus domesticus DNA, BAC clone: B6Ng01-017A08, 5' end.DH850820|Mus musculus domesticus DNA, BAC clone: B6Ng01-017A08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(109,814,486 - 109,815,221)(109,950,471 - 109,951,409)
sequence
gaattcttgtttggttttcgactagaaccatgtcccttctgtcaaatttg
aggatatagttaggggattattgactggattctatgaaatctgcatttta
ccatgtttcatcctgatattttataccagtaggaagcctcatgcaagtag
cctgctcagtcatgtctacatcaacttgttatgtgaaaataatggtaagt
tatacagcataagttgatcattctcacctcggatgaattctctgaaaatg
taatgcatcagtcacactatgggtcatgatactctatgaatatacagaaa
aggatgtctttcaagtctcatgctgagtaatgagttaaatacagttttat
tggtagcattcaaactggtttttatcaagagactttgctcattacatata
ccagttcttcagaatccagggtttcagaggcattcctcagtacctgtcta
ataagcccccttgtttgtgctgtttccagtctctgtgcgtactccacatt
atgctggtttcctacaaaatctcaaactttcatcttaccctaagaatata
tttatgtctgccaatcttgaacataatttttatcactcactggataccag
ctttttccaccatttgccttttattctgctccacaggttaaccaatcaca
tagcaacttcaaaaatctttatacctacccaattgcctgtcttatttatt
cattttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgc
gaattcacactatcacgagtggagcatctgcagtccaagcacttataaag
ataaggcagaagactgagagatgacatattacggacatttgaaatcatgg
tttgcagggggatgctaatacaatgagctctggaataatttcaaatgata
cgttttattataaaaacatgaaaaggaaaggttaataaatttttgcaata
aaactaattatcatccctgtaagcatacactatttcttcatttaaatttt
acatatttaattagatggcccattaaatgcaaattttcacttgtaaaaat
caaaaaagagttagtgacttaatcattttgttatactgcactgtcacata
aaaatttaagaaagaaagacactctgccttgtattctctaggttttgatt
ttcctttaagcctaaggtgaaaatactttttccttgtgtggaagtaaaca
taaaattcatgttttttctctcaaataaactaaatactagttgatgttta
atcatattgccttatgcaacacagatcaacaaaggcattggatctctgta
actggagttatatgcagttgtgatgcagtagaagtgggtgcttagaatct
agccccaaggccctcttcaagagcagaaaaatgctccttattataaagcc
tgcttttagcatgattttaaacagaataagttttgatataatttatttta
ttgagagagatatatatccaatatatcagtactaagctgtagttgagatt
ttctttaaattctcacgaggcatgaattggtgtttcccttgactttatgt
gctaccaatttgactagagatgttaaaattcgagccacacattcacagtt
ggctatcttcagagagcattttgtcttattttctcctgtgtcaggcttat
gatcacaccactctgaaattcttcaggtacggatcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_109814486_109815221
seq2: B6Ng01-017A08.b_48_783

seq1  GAATTCTTGTTTGGTTTTCGACTAGAACCATGTCCCTTCTGTCAAATTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGTTTGGTTTTCGACTAGAACCATGTCCCTTCTGTCAAATTTG  50

seq1  AGGATATAGTTAGGGGATTATTGACTGGATTCTATGAAATCTGCATTTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATATAGTTAGGGGATTATTGACTGGATTCTATGAAATCTGCATTTTA  100

seq1  CCATGTTTCATCCTGATATTTTATACCAGTAGGAAGCCTCATGCAAGTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTTTCATCCTGATATTTTATACCAGTAGGAAGCCTCATGCAAGTAG  150

seq1  CCTGCTCAGTCATGTCTACATCAACTTGTTATGTGAAAATAATGGTAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTCAGTCATGTCTACATCAACTTGTTATGTGAAAATAATGGTAAGT  200

seq1  TATACAGCATAAGTTGATCATTCTCACCTCGGATGAATTCTCTGAAAATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACAGCATAAGTTGATCATTCTCACCTCGGATGAATTCTCTGAAAATG  250

seq1  TAATGCATCAGTCACACTATGGGTCATGATACTCTATGAATATACAGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGCATCAGTCACACTATGGGTCATGATACTCTATGAATATACAGAAA  300

seq1  AGGATGTCTTTCAAGTCTCATGCTGAGTAATGAGTTAAATACAGTTTTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGTCTTTCAAGTCTCATGCTGAGTAATGAGTTAAATACAGTTTTAT  350

seq1  TGGTAGCATTCAAACTGGTTTTTATCAAGAGACTTTGCTCATTACATATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAGCATTCAAACTGGTTTTTATCAAGAGACTTTGCTCATTACATATA  400

seq1  CCAGTTCTTCAGAATCCAGGGTTTCAGAGGCATTCCTCAGTACCTGTCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTCTTCAGAATCCAGGGTTTCAGAGGCATTCCTCAGTACCTGTCTA  450

seq1  ATAAGCCCCCTTGTTTGTGCTGTTTCCAGTCTCTGTGCGTACTCCACATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCCCCCTTGTTTGTGCTGTTTCCAGTCTCTGTGCGTACTCCACATT  500

seq1  ATGCTGGTTTCCTACAAAATCTCAAACTTTCATCTTACCCTAAGAATATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGGTTTCCTACAAAATCTCAAACTTTCATCTTACCCTAAGAATATA  550

seq1  TTTATGTCTGCCAATCTTGAACATAATTTTTATCACTCACTGGATACCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGTCTGCCAATCTTGAACATAATTTTTATCACTCACTGGATACCAG  600

seq1  CTTTTTCCACCATTTGCCTTTTATTCTGCTCCACAGGTTAACCAATCACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTCCACCATTTGCCTTTTATTCTGCTCCACAGGTTAACCAATCACA  650

seq1  TAGCAACTTCAAAAATCTTTATACCTACCCAATTGCCTGTCTTATTTATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAACTTCAAAAATCTTTATACCTACCCAATTGCCTGTCTTATTTATT  700

seq1  CATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC  736
      ||||||||||||||||||||||||||||||||||||
seq2  CATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC  736

seq1: chr14_109950471_109951409
seq2: B6Ng01-017A08.g_67_1003 (reverse)

seq1  ATGATCCGTAACTTGAAGAATTTCAGAGTGGTGTGATCAT-AGCCTGACA  49
      ||||||||| || ||||||||||||||||||||||||||| |||||||||
seq2  ATGATCCGT-ACCTGAAGAATTTCAGAGTGGTGTGATCATAAGCCTGACA  49

seq1  CAGGAGAAAATAAGACAAAATGCTCTCTGAAGATAGCCAACTGTGAATGT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGAAAATAAGACAAAATGCTCTCTGAAGATAGCCAACTGTGAATGT  99

seq1  GTGGCTCGAATTTTAACATCTCTAAGTCAAATTGGTAGCACATAAAGTCA  149
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GTGGCTCGAATTTTAACATCTCT-AGTCAAATTGGTAGCACATAAAGTCA  148

seq1  AGGGAAAACACCAATTCATGCCTCGTGAGAATTTAAAGAAAATCTCAACT  199
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGG-AAACACCAATTCATGCCTCGTGAGAATTTAAAGAAAATCTCAACT  197

seq1  ACAGCTTAGTACTGATATATTGGATATATATCTCTCTCAATAAAATAAAT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTTAGTACTGATATATTGGATATATATCTCTCTCAATAAAATAAAT  247

seq1  TATATCAAAACTTATTCTGTTTAAAATCATGCTAAAAGCAGGCTTTATAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCAAAACTTATTCTGTTTAAAATCATGCTAAAAGCAGGCTTTATAA  297

seq1  TAAGGAGCATTTTTCTGCTCTTGAAGAGGGCCTTGGGGCTAGATTCTAAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGAGCATTTTTCTGCTCTTGAAGAGGGCCTTGGGGCTAGATTCTAAG  347

seq1  CACCCACTTCTACTGCATCACAACTGCATATAACTCCAGTTACAGAGATC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCACTTCTACTGCATCACAACTGCATATAACTCCAGTTACAGAGATC  397

seq1  CAATGCCTTTGTTGATCTGTGTTGCATAAGGCAATATGATTAAACATCAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGCCTTTGTTGATCTGTGTTGCATAAGGCAATATGATTAAACATCAA  447

seq1  CTAGTATTTAGTTTATTTGAGAGAAAAAACATGAATTTTATGTTTACTTC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTATTTAGTTTATTTGAGAGAAAAAACATGAATTTTATGTTTACTTC  497

seq1  CACACAAGGAAAAAGTATTTTCACCTTAGGCTTAAAGGAAAATCAAAACC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAAGGAAAAAGTATTTTCACCTTAGGCTTAAAGGAAAATCAAAACC  547

seq1  TAGAGAATACAAGGCAGAGTGTCTTTCTTTCTTAAATTTTTATGTGACAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGAATACAAGGCAGAGTGTCTTTCTTTCTTAAATTTTTATGTGACAG  597

seq1  TGCAGTATAACAAAATGATTAAGTCACTAACTCTTTTTTGATTTTTACAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGTATAACAAAATGATTAAGTCACTAACTCTTTTTTGATTTTTACAA  647

seq1  GTGAAAATTTGCATTTAATGGGCCATCTAATTAAATATGTAAAATTTAAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAAATTTGCATTTAATGGGCCATCTAATTAAATATGTAAAATTTAAA  697

seq1  TGAAGAAATAGTGTATGCTTACAGGGATGATAATTAGTTTTATTGCAAAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAAATAGTGTATGCTTACAGGGATGATAATTAGTTTTATTGCAAAA  747

seq1  ATTTATTAACCTTTCCTTTTCATGTTTTTATAATAAAACGTATCATTTGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTAACCTTTCCTTTTCATGTTTTTATAATAAAACGTATCATTTGA  797

seq1  AATTATTCCAGAGCTCATTGTATTAGCATCCCCCTGCAAACCATGATTTC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATTCCAGAGCTCATTGTATTAGCATCCCCCTGCAAACCATGATTTC  847

seq1  AAATGTCCGTAATATGTCATCTCTCAGTCTTCTGCCTTATCTTTATAAGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTCCGTAATATGTCATCTCTCAGTCTTCTGCCTTATCTTTATAAGT  897

seq1  GCTTGGACTGCAGATGCTCCACTCGTGATAGTGTGAATTC  939
      ||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGGACTGCAGATGCTCCACTCGTGATAGTGTGAATTC  937