BAC Information

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BAC

Clone NameB6Ng01-017K07
Chromosome14 (Build37)
Map Location 91,407,295 - 91,489,260
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100043336
Downstream geneEG639558, EG665377
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-017K07.bB6Ng01-017K07.g
ACCDH851268DH851269
length1,0811,094
definitionDH851268|Mus musculus domesticus DNA, BAC clone: B6Ng01-017K07, 5' end.DH851269|Mus musculus domesticus DNA, BAC clone: B6Ng01-017K07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(91,407,295 - 91,408,388)(91,488,152 - 91,489,260)
sequence
gaattcattgttattatatgtacatatatatgtatgtatggaaagattaa
ggaagaaagtggaatatgagagccactagtcgaaggatgataaatgattg
tcattgtcactagacatggaaattaattctggtcagactttccagaatcc
tcagtagaaaccaggcatgttcacatgattcttgcttccagacttcagaa
cagaaaaatatccatttcttttatgcttcttagtttataagtgactataa
gaaagtaaaatagaaaaaaaggaaaatgaaaggactaaaagtttttaaac
catgagaaaagaaagagaccacatggtattgcatactgtccagctcagcc
acagcttctttgctacttttatgcacagagcaatgctaagaggattgtgg
agaacgtttcccaaggaactcatatttcagtcgatatcaacattgcaaag
aatcaaatgcttttcatacgtattcactttatatgtgtgtgtgcttgcat
gtaagtcatatgtatattaatatcattcttaccatataaatttgttgttc
aatagtctcaagtggttatatgagtttcctcatgtgtttattaaatactt
taagaaattaaccattgacctcactgagaatgtgactataggaaagattg
ccatttaaatattttatttacaaataaatataaacttattacgttttcca
cagaaggtatgttataatttccagagaaagtattaatgttacaatagtat
agatgacattaaaataagaacagggtaaagaaaatttaatctctaagaca
ggaaacattttatattatcacttcaatacaacaactttcaaattctgaaa
gcttttgtgttccagaaaaaaactaagatagaagctgttttgatatttgt
aaatgcctaccagtgtttattaaactatagtaaatctatgtagctcatat
gttttctgatttttgttgcatacaaaatgtattgacacttttcatattaa
gacacgagaaataatggtacatgggatattatacatattgtaatcactga
ctataggaatgatattgatctatatataaag
gaattcaccagggaaacaacttgaggtgtacaggttccaaaacactcatt
ttatttttcctcagtttatgggaaggctatgaatgctggctactaagaag
agaaatcgaggatatgaaaacacaattaaagagctgcaaaaactccatca
gttcttctctttcacctattgccaataagatgtctgggaactctgagagc
accatatccaaataacaacaggaggcattgtaccataatggtctacaaaa
tttagttacagagtcacctagctgtggggcttaattgtggggttgcttct
attaacaaagaaaccattttataatcgggaaaatatattattaattagta
tcatgtgttttcaatatgtatttggaaaatgtgtttatttattgttctga
gataaaatgggcagagaaacaacctgtttatttttgcatcttgctcatat
cagtatctactattggaatttatgggaggttattattgcacctgttgtat
ccccaattgttctttcagatgctgtgttttttccccctggtagacaatac
atagtctccactagttgtgataaagctgagaaaaagtgctaggtgtggtg
gaacatgtctttaatctcagcacttgggaggcagaggcaggcagatttct
gagttcgaggccagcctggtctacaaagtgagttccaggacagctggggc
tacacagataaaccccgtctccaaaaaaaccaaccaaccaaccaaacaaa
caaacactaaaagcaaaacaaaacaaacaaaacaaacaaacaaaaaactg
agaaaaagtaagatgaatgttttggaacctctatactaaaactttttcct
tgatgaataatagatttattggattgataaaatcttggaaatatgtcatg
ttgtggtctcttccagcagagagaaatcttcagattaagttctatccaga
tccaggcctccagaattttgaggttggattcttttttagggcattatgca
tttacttaaggaaggaggctcaaaggccaatttacaggaagataatatgt
ctaatgtattatgattttctgaaactgaatttctaagaattgtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_91407295_91408388
seq2: B6Ng01-017K07.b_48_1128

seq1  GAATTCATTGTTATTATATGTACATATATATGTATGTATGGAAAGATTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGTTATTATATGTACATATATATGTATGTATGGAAAGATTAA  50

seq1  GGAAGAAAGTGGAATATGAGAGCCACTAGTCGAAGGATGATAAATGATTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAAAGTGGAATATGAGAGCCACTAGTCGAAGGATGATAAATGATTG  100

seq1  TCATTGTCACTAGACATGGAAATTAATTCTGGTCAGACTTTCCAGAATCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGTCACTAGACATGGAAATTAATTCTGGTCAGACTTTCCAGAATCC  150

seq1  TCAGTAGAAACCAGGCATGTTCACATGATTCTTGCTTCCAGACTTCAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTAGAAACCAGGCATGTTCACATGATTCTTGCTTCCAGACTTCAGAA  200

seq1  CAGAAAAATATCCATTTCTTTTATGCTTCTTAGTTTATAAGTGACTATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAAATATCCATTTCTTTTATGCTTCTTAGTTTATAAGTGACTATAA  250

seq1  GAAAGTAAAATAGAAAAAAAGGAAAATGAAAGGACTAAAAGTTTTTAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTAAAATAGAAAAAAAGGAAAATGAAAGGACTAAAAGTTTTTAAAC  300

seq1  CATGAGAAAAGAAAGAGACCACATGGTATTGCATACTGTCCAGCTCAGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGAAAAGAAAGAGACCACATGGTATTGCATACTGTCCAGCTCAGCC  350

seq1  ACAGCTTCTTTGCTACTTTTATGCACAGAGCAATGCTAAGAGGATTGTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTTCTTTGCTACTTTTATGCACAGAGCAATGCTAAGAGGATTGTGG  400

seq1  AGAACGTTTCCCAAGGAACTCATATTTCAGTCGATATCAACATTGCAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACGTTTCCCAAGGAACTCATATTTCAGTCGATATCAACATTGCAAAG  450

seq1  AATCAAATGCTTTTCATACGTATTCACTTTATATGTGTGTGTGCTTGCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAAATGCTTTTCATACGTATTCACTTTATATGTGTGTGTGCTTGCAT  500

seq1  GTAAGTCATATGTATATTAATATCATTCTTACCATATAAATTTGTTGTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGTCATATGTATATTAATATCATTCTTACCATATAAATTTGTTGTTC  550

seq1  AATAGTCTCAAGTGGTTATATGAGTTTCCTCATGTGTTTATTAAATACTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTCTCAAGTGGTTATATGAGTTTCCTCATGTGTTTATTAAATACTT  600

seq1  TAAGAAATTAACCATTGACCTCACTGAGAATGTGACTATAGGAAAGATTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAATTAACCATTGACCTCACTGAGAATGTGACTATAGGAAAGATTG  650

seq1  CCATTTAAATATTTTATTTACAAATAAATATAAACTTATTACGTTTTCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTAAATATTTTATTTACAAATAAATATAAACTTATTACGTTTTCCA  700

seq1  CAGAAGGTATGTTATAATTTCCAGAGAAAGTATTAATGTTACAATAGTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGGTATGTTATAATTTCCAGAGAAAGTATTAATGTTACAATAGTAT  750

seq1  AGATGACATTAAAATAAGAACAGGGTAAAGAAAATTTAATCTCTAAGACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGACATTAAAATAAGAACAGGGTAAAGAAAATTTAATCTCTAAGACA  800

seq1  GGAAACATTTTATATTATCACTTCAATACAACAACTTTCAAATTCTGAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACATTTTATATTATCACTTCAATACAACAACTTTCAAATTCTGAAA  850

seq1  GCTTTTGTGTTCCAGAAAAAAACTAAGATAGAAGCTGTTTTGATATTTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTGTGTTCCAGAAAAAAACTAAGATAGAAGCTGTTTTGATATTTGT  900

seq1  AAATGCCTACCAGTGTTTTATTAAACTATAGTAAATCTATGTAGCTCATA  950
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AAATGCCTACCAGTG-TTTATTAAACTATAGTAAATCTATGTAGCTCATA  949

seq1  TGTTTTCTGATTTTTGTTGCAATACAAAAATGTATTGACACTTTTCCATA  1000
      |||||||||||||||||||| |||| ||||||||||||||||||| ||||
seq2  TGTTTTCTGATTTTTGTTGC-ATAC-AAAATGTATTGACACTTTT-CATA  996

seq1  TTAAGACACCGAGAAAATAAATGGTACATGGAATATTATACATATTGTAA  1050
      |||||||| |||||||   |||||||||||| ||||||||||||||||||
seq2  TTAAGACA-CGAGAAA--TAATGGTACATGGGATATTATACATATTGTAA  1043

seq1  TCAACTGACAATAAGAAATGATATTTAAATCTATAAATATAAAG  1094
      || |||||| || || |||||||||   ||||||  ||||||||
seq2  TC-ACTGACTAT-AGGAATGATATT--GATCTAT--ATATAAAG  1081

seq1: chr14_91488152_91489260
seq2: B6Ng01-017K07.g_66_1159 (reverse)

seq1  GACATTTCTTAGAGAATTCTAGTTTCCAGAAAATCATAATTACTATAGAC  50
      |||| |||||||| ||||| ||||| ||||||||||||| |||  |||||
seq2  GACAATTCTTAGA-AATTC-AGTTT-CAGAAAATCATAA-TACATTAGAC  46

seq1  TATATTATCTT-CTGTAAAATTGTGCTTTTGAGCCTCCCTTCTTTAAGTA  99
       |||||||||| |||| |||||| || ||||||||| ||||| |||||||
seq2  -ATATTATCTTCCTGT-AAATTG-GCCTTTGAGCCT-CCTTCCTTAAGTA  92

seq1  AATTGCATATTGGCCCTAAAAAAG-ATCCAACCTCAAAATTCTGGA-GCC  147
      || |||||| | |||||||||||| ||||||||||||||||||||| |||
seq2  AA-TGCATAAT-GCCCTAAAAAAGAATCCAACCTCAAAATTCTGGAGGCC  140

seq1  TGGATTCTGGATAGGACTTAATTCTGAGATTTTCTTCTCTGCTGGGAAGA  197
      |||| ||||||||| |||||| |||||   |||| |||||||| ||||||
seq2  TGGA-TCTGGATAGAACTTAA-TCTGAAGATTTC-TCTCTGCT-GGAAGA  186

seq1  GACCACAACATGACATATTTCCAAGATTTTATCATTCCAATAAATTCTTA  247
      |||||||||||||||||||||||||||||||||| ||||||||||   ||
seq2  GACCACAACATGACATATTTCCAAGATTTTATCAATCCAATAAAT--CTA  234

seq1  TTATTCATCAAGGAAAAAGTTTTAGTATAGAGGTTCCAAAACATTCATCT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCATCAAGGAAAAAGTTTTAGTATAGAGGTTCCAAAACATTCATCT  284

seq1  TACTTTTTCTCAGTTTTTTTGTTTGTTTGTTTTGTTTTGTTTTGTTTTGC  347
      ||||||||||||| |||||||||||||||||||| |||||||||||||||
seq2  TACTTTTTCTCAG-TTTTTTGTTTGTTTGTTTTG-TTTGTTTTGTTTTGC  332

seq1  TTTTAGTGTTTGTTTGTTTGGTTGGTTGGTTGGTTTTTTTGGAGACGGGG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGTGTTTGTTTGTTTGGTTGGTTGGTTGGTTTTTTTGGAGACGGGG  382

seq1  TTTATCTGTGTAGCCCCAGCTGTCCTGGAACTCACTTTGTAGACCAGGCT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCTGTGTAGCCCCAGCTGTCCTGGAACTCACTTTGTAGACCAGGCT  432

seq1  GGCCTCGAACTCAGAAATCTGCCTGCCTCTGCCTCCCAAGTGCTGAGATT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTCGAACTCAGAAATCTGCCTGCCTCTGCCTCCCAAGTGCTGAGATT  482

seq1  AAAGACATGTTCCACCACACCTAGCACTTTTTCTCAGCTTTATCACAACT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACATGTTCCACCACACCTAGCACTTTTTCTCAGCTTTATCACAACT  532

seq1  AGTGGAGACTATGTATTGTCTACCAGGGGGAAAAAACACAGCATCTGAAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGAGACTATGTATTGTCTACCAGGGGGAAAAAACACAGCATCTGAAA  582

seq1  GAACAATTGGGGATACAACAGGTGCAATAATAACCTCCCATAAATTCCAA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAATTGGGGATACAACAGGTGCAATAATAACCTCCCATAAATTCCAA  632

seq1  TAGTAGATACTGATATGAGCAAGATGCAAAAATAAACAGGTTGTTTCTCT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAGATACTGATATGAGCAAGATGCAAAAATAAACAGGTTGTTTCTCT  682

seq1  GCCCATTTTATCTCAGAACAATAAATAAACACATTTTCCAAATACATATT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCATTTTATCTCAGAACAATAAATAAACACATTTTCCAAATACATATT  732

seq1  GAAAACACATGATACTAATTAATAATATATTTTCCCGATTATAAAATGGT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACACATGATACTAATTAATAATATATTTTCCCGATTATAAAATGGT  782

seq1  TTCTTTGTTAATAGAAGCAACCCCACAATTAAGCCCCACAGCTAGGTGAC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTGTTAATAGAAGCAACCCCACAATTAAGCCCCACAGCTAGGTGAC  832

seq1  TCTGTAACTAAATTTTGTAGACCATTATGGTACAATGCCTCCTGTTGTTA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAACTAAATTTTGTAGACCATTATGGTACAATGCCTCCTGTTGTTA  882

seq1  TTTGGATATGGTGCTCTCAGAGTTCCCAGACATCTTATTGGCAATAGGTG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGATATGGTGCTCTCAGAGTTCCCAGACATCTTATTGGCAATAGGTG  932

seq1  AAAGAGAAGAACTGATGGAGTTTTTGCAGCTCTTTAATTGTGTTTTCATA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGAAGAACTGATGGAGTTTTTGCAGCTCTTTAATTGTGTTTTCATA  982

seq1  TCCTCGATTTCTCTTCTTAGTAGCCAGCATTCATAGCCTTCCCATAAACT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCGATTTCTCTTCTTAGTAGCCAGCATTCATAGCCTTCCCATAAACT  1032

seq1  GAGGAAAAATAAAATGAGTGTTTTGGAACCTGTACACCTCAAGTTGTTTC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAAAATAAAATGAGTGTTTTGGAACCTGTACACCTCAAGTTGTTTC  1082

seq1  CCTGGTGAATTC  1109
      ||||||||||||
seq2  CCTGGTGAATTC  1094