BAC Information

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BAC

Clone NameB6Ng01-018I01
Chromosome14 (Build37)
Map Location 21,473,527 - 21,566,353
singlet/doubletdoublet
Overlap geneMyoz1, Synpo2l, Sec24c, Fut11, Chchd1, 2310021P13Rik, Ndst2, Camk2g
Upstream geneEG664855, Nid2, 2700060E02Rik, LOC100039534, Gng2, 1810063B07Rik, Kcnk5, LOC100039106, Kcnk16, Nudt13, Ecd, AA536717, Dnajc9, Mrps16, Ttc18, Anxa7, Zmynd17, Ppp3cb, Usp54
Downstream genePlau, EG620119, Vcl, Ap3m1, Adk, Myst4, EG435391, Dusp13
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-018I01.bB6Ng01-018I01.g
ACCDH851888DH851889
length800753
definitionDH851888|Mus musculus domesticus DNA, BAC clone: B6Ng01-018I01, 5' end.DH851889|Mus musculus domesticus DNA, BAC clone: B6Ng01-018I01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(21,565,558 - 21,566,353)(21,473,527 - 21,474,275)
sequence
gaattctgccctctgctgtctcaggataggaacattaagatagcagttgc
tatgttgtgttttgttggtgatgggttgcggttgctgctgttgttgttaa
catgggaacttctttccagccggtagaattcagtagcatctttatagtgc
ttgatgttgactcaagattccatgcctagcccgggttttaagagctctca
gccactgacagcagctgaggttatataacttagatctggcccatgaggcc
tctagacaagaggtagaagagtctggatgcggtctgtgcagagaagaaat
gcattctgaccatcagcacgtcttcacttacactctgaataaaggcacat
aatgtttgtctctgcctgtggaagaagtcaccttgtgacgctgctccttc
gtggctgtaactacactgggacccagggagactgagttaaactgttcaag
aaatctgaagaggcagagcgcactggtgtgggtccctgcactggagattg
gccttcttccttcctctccagcccctcacactctttcttggctgcgtcac
tctgtaatgtttgagaaagcaaggaatatccctggtggtcgagttgccat
taggaatattggcttgctgggcggcttgttctttcctgggagctgagtgc
tgggactgcagccacatccaccgctgagagttgcctgccctttccctggg
gctgtgccctcacttccagctgctcaagtccaggacttaccaggtggaag
atgaacagtcagggagatctgttgctacatttttatacccatgttgaatt

gaattcactattagactgatttggccttgaactcacaagatctccctgcc
cactgtccccttccctctgcaccttcccccttccccctgcctctgtcccc
tgttccctacccctgcccctgcccctgcccctgccccctgccccggctcc
ttctgccacctcctaagtgctaggattaaaggcatgcactaccattcgta
gcccataagaagtggttttgttttgttttgatttcctggcttggaggtag
agacagtacaggggaacaaagggaatgacatatagggttggaatacttca
gtgaagaggtgacccagccaaggggcatgggcgtggagtgaaggagaaca
agaataagagaacaccacagacagtagccaagggagaaattacaccctgg
gccgggaaagctgataggccaatcccacgtgcagcttcacacctctaaac
acagatcctgctcttctttcctttctttttttcttcagtgaactctcact
ccaaaggtatcaggggaacttcacacttggcaactcgtgcgcatccccag
ggagtgtggctgtgtagttttcctattttaaatgctttacacaagtttcc
ctaacacttagaaagaaataaggaagttaaccatttggtgaggcctagcc
tgtgttctcacaggacttgactgactatgggtcctgctaaaatgtccagt
atcttagcagggtgttggtctcagagtatccatgggaaaggatgggagga
tgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_21565558_21566353
seq2: B6Ng01-018I01.b_46_845 (reverse)

seq1  AATTCAACATGGGTAT-AAAATGTAGCCACAGATCTCCCTG-CTGTTCAT  48
      |||||||||||||||| |||||||||| ||||||||||||| ||||||||
seq2  AATTCAACATGGGTATAAAAATGTAGCAACAGATCTCCCTGACTGTTCAT  50

seq1  CTTCCACCTGGTAAGTCCTGGACTTGAGCAGCTGGAAGTGAGGGCACAGC  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCACCTGGTAAGTCCTGGACTTGAGCAGCTGGAAGTGAGGGCACAGC  100

seq1  CCCAGGG-AAGGGCAGGCAACTCTCAGCGGTGGTTGTGGCTGCAGTCCCA  147
      ||||||| ||||||||||||||||||||||||| ||||||||||||||||
seq2  CCCAGGGAAAGGGCAGGCAACTCTCAGCGGTGGATGTGGCTGCAGTCCCA  150

seq1  GCACTCAGCTCCCAGGAAAGAACAAGCCGCCCAGCAAGCCAATATTCCTA  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTCAGCTCCCAGGAAAGAACAAGCCGCCCAGCAAGCCAATATTCCTA  200

seq1  ATGGCAACTCGACCACCAGGGATATTCCTTGCTTTCTCAAACATTACAGA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCAACTCGACCACCAGGGATATTCCTTGCTTTCTCAAACATTACAGA  250

seq1  GTGACGCAGCCAAGAAAGAGTGTGAGGGGCTGGAGAGGAAGGAAGAAGGC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACGCAGCCAAGAAAGAGTGTGAGGGGCTGGAGAGGAAGGAAGAAGGC  300

seq1  CAATCTCCAGTGCAGGGACCCACACCAGTGCGCTCTGCCTCTTCAGATTT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTCCAGTGCAGGGACCCACACCAGTGCGCTCTGCCTCTTCAGATTT  350

seq1  CTTGAACAGTTTAACTCAGTCTCCCTGGGTCCCAGTGTAGTTACAGCCAC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAACAGTTTAACTCAGTCTCCCTGGGTCCCAGTGTAGTTACAGCCAC  400

seq1  GAAGGAGCAGCGTCACAAGGTGACTTCTTCCACAGGCAGAGACAAACATT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAGCAGCGTCACAAGGTGACTTCTTCCACAGGCAGAGACAAACATT  450

seq1  ATGTGCCTTTATTCAGAGTGTAAGTGAAGACGTGCTGATGGTCAGAATGC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCCTTTATTCAGAGTGTAAGTGAAGACGTGCTGATGGTCAGAATGC  500

seq1  ATTTCTTCTCTGCACAGACCGCATCCAGACTCTTCTACCTCTTGTCTAGA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTCTCTGCACAGACCGCATCCAGACTCTTCTACCTCTTGTCTAGA  550

seq1  GGCCTCATGGGCCAGATCTAAGTTATATAACCTCAGCTGCTGTCAGTGGC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTCATGGGCCAGATCTAAGTTATATAACCTCAGCTGCTGTCAGTGGC  600

seq1  TGAGAGCTCTTAAAACCCGGGCTAGGCATGGAATCTTGAGTCAACATCAA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGCTCTTAAAACCCGGGCTAGGCATGGAATCTTGAGTCAACATCAA  650

seq1  GCACTATAAAGATGCTACTGAATTCTACCGGCTGGAAAGAAGTTCCCATG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTATAAAGATGCTACTGAATTCTACCGGCTGGAAAGAAGTTCCCATG  700

seq1  TTAACAACAACAGCAGCAACCGCAACCCATCACCAACAAAACACAACATA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACAACAACAGCAGCAACCGCAACCCATCACCAACAAAACACAACATA  750

seq1  GCAACTGCTATCTT-CTGTTCCTATCCTGAGACAGCAGAGGGCAGAATTC  796
      ||||||||||||||  ||||||||||||||||||||||||||||||||||
seq2  GCAACTGCTATCTTAATGTTCCTATCCTGAGACAGCAGAGGGCAGAATTC  800

seq1: chr14_21473527_21474275
seq2: B6Ng01-018I01.g_67_819

seq1  GAATTCACTATTAGACTGATTTGGCCTTGAACTCACAAGATCTCCCTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTATTAGACTGATTTGGCCTTGAACTCACAAGATCTCCCTGCC  50

seq1  CACTGTCCCCTTCCCTCTGCACCTTCCCCCTTCCCCCTGCCTCTGTCCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTCCCCTTCCCTCTGCACCTTCCCCCTTCCCCCTGCCTCTGTCCCC  100

seq1  TGTTCCCTACCCCTGCCCCTGCCCCTGCCCCTGCCCCCTGCCCCGGCTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCCTACCCCTGCCCCTGCCCCTGCCCCTGCCCCCTGCCCCGGCTCC  150

seq1  TTCTGCCACCTCCTAAGTGCTAGGATTAAAGGCATGCACTACCATTCGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCCACCTCCTAAGTGCTAGGATTAAAGGCATGCACTACCATTCGTA  200

seq1  GCCCATAAGAAGTGGTTTTGTTTTGTTTTGATTTCCTGGCTTGGAGGTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCATAAGAAGTGGTTTTGTTTTGTTTTGATTTCCTGGCTTGGAGGTAG  250

seq1  AGACAGTACAGGGGAACAAAGGGAATGACATATAGGGTTGGAATACTTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGTACAGGGGAACAAAGGGAATGACATATAGGGTTGGAATACTTCA  300

seq1  GTGAAGAGGTGACCCAGCCAAGGGGCATGGGCGTGGAGTGAAGGAGAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGAGGTGACCCAGCCAAGGGGCATGGGCGTGGAGTGAAGGAGAACA  350

seq1  AGAATAAGAGAACACCACAGACAGTAGCCAAGGGAGAAATTACACCCTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAAGAGAACACCACAGACAGTAGCCAAGGGAGAAATTACACCCTGG  400

seq1  GCCGGGAAAGCTGATAGGCCAATCCCACGTGCAGCTTCACACCTCTAAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGGGAAAGCTGATAGGCCAATCCCACGTGCAGCTTCACACCTCTAAAC  450

seq1  ACAGATCCTGCTCTTCTTTCCTTTCTTTTTTTCTTCAGTGAACTCTCACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATCCTGCTCTTCTTTCCTTTCTTTTTTTCTTCAGTGAACTCTCACT  500

seq1  CCAAAGGTATCAGGGGAACTTCACACTTGGCAACTCGTGCGCATCCCCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGGTATCAGGGGAACTTCACACTTGGCAACTCGTGCGCATCCCCAG  550

seq1  GGAGTGTGGCTGTGTAG-TTTCCTATTTTAAATGC-TTACACAAG-TTCC  597
      ||||||||||||||||| ||||||||||||||||| ||||||||| ||||
seq2  GGAGTGTGGCTGTGTAGTTTTCCTATTTTAAATGCTTTACACAAGTTTCC  600

seq1  CTAACACTTAGAAAGAAATAAGGAAGTTAACCATTTGGTGAGGCCTAGCC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACACTTAGAAAGAAATAAGGAAGTTAACCATTTGGTGAGGCCTAGCC  650

seq1  TGTGTTCTCACAGGACTTGACTGACTATGGGTCCTGCTAAAATGTCCAGT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTCTCACAGGACTTGACTGACTATGGGTCCTGCTAAAATGTCCAGT  700

seq1  ATCTTAGCAGGGTGTT-GTCTCAGAGTAATCAATGGG-AAGGATGGGAGG  745
      |||||||||||||||| |||||||||| ||| ||||| ||||||||||||
seq2  ATCTTAGCAGGGTGTTGGTCTCAGAGT-ATCCATGGGAAAGGATGGGAGG  749

seq1  ATGC  749
      ||||
seq2  ATGC  753