BAC Information

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BAC

Clone NameB6Ng01-019D16
Chromosome14 (Build37)
Map Location 117,811,916 - 117,813,058
singlet/doubletsinglet
Overlap geneGpc6
Upstream geneGpc5
Downstream gene5730405N03Rik, LOC100043822, Dct, Tgds, Gpr180, LOC100043824, LOC100043539, Sox21, LOC100043825, EG668814, LOC435422
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-019D16.bB6Ng01-019D16.g
ACCDH852382DH852383
length1,1421,165
definitionDH852382|Mus musculus domesticus DNA, BAC clone: B6Ng01-019D16, 5' end.DH852383|Mus musculus domesticus DNA, BAC clone: B6Ng01-019D16, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacctcactgaggactaataatcaagtggaaaagttaattggtgg
catgtgaatttatttagttacataatataaaactgaaactctaaaattga
cattctctgggggcagcagaggattcaggactgacaggtgaagagcaaga
aaatgaagttcagatcttacaatgaagctatcaaagaaacacaatcgcga
agcagttaaatcagaaagtctccatgatgctagacatacttaagactgat
tctccttctctgcctccctcataagaatttttggtcatcaacttgcatat
gcattttctagaaaaagagggtagtgagccgcaccatgcctataactttc
agatctattggctataagttaggaaagccttatttttcttttctttacgt
tacttctaggagacccagaatctaatgaaacactgttcttaacttgctcc
ttttgaaagtattatactcaggcttatcaacagctttattgattatatgg
gaagctcatgccctgcttgaatggcacgagtcagtgcttcctgtagatca
gtggattcctgactgctttatgatatgaaagcagcagcagcaccaatgtc
gggattgatcttctctctaaacaaacccacgcacatgcacagtcattggg
gctctcttagcgttatctccttccacactcagcctcagggaatcagtaat
tcctcttcctgtacatttatttttctgttcatacaaatgtttggtgtttt
ccgtgatttttttaattaataatgtttgatttgattttagtaatcatttt
ttaattaggtattttcctcatttacatttccaatgctatcccaaaagtcc
cccataccttccccccactcccttaccaacccactgccactttttggccc
tggcgttcccctgtactggagcatataaagtttgcaagtccaatgggcct
ctctttccagtgatgtccgactaggccatcttttgatacattatgcaggt
agaagtcaagagctccgggtactggttagttcataatgttgttccactta
tgtttgcagaatcctttagcctcttgggatttctctctagctcctccaat
tgggggtcttgtatccaatttcctgatctttatataatatat
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtatggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcttccaaatgctgacaccattgcatacactagcaagattttactgaaa
ggacccagatgtagctgtctctagtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccca
atggagagctagagaaagtacccaaggagctaaagggtcttcaaccttat
agtggaacaacattatgaactaaccagtacccctgagctcttgactctag
ctgcatatgtatcaaagatggcctagtcgccatcacttgcaagaaagccc
attgaccccaactttggtgcccggtacaggatcccagggccaaggagggg
ggagtgtggggtaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_117811916_117813058
seq2: B6Ng01-019D16.b_46_1187 (reverse)

seq1  ATATA-TATATAAAGATCAGGAAAATTGGATTACAGGACCCCCAA-TGGA  48
      ||||| ||||||||||||||| |||||||| |||| ||||||||| ||||
seq2  ATATATTATATAAAGATCAGG-AAATTGGA-TACAAGACCCCCAATTGGA  48

seq1  GGAGCTAGAGAAAATACCCAAGGAGCTAAAGGGATCTGCAACACTATAGG  98
      ||||||||||| ||  ||||||  ||||||||  ||||||| || ||| |
seq2  GGAGCTAGAGAGAAATCCCAAGAGGCTAAAGGATTCTGCAA-AC-ATAAG  96

seq1  TGGAACAACATTATGAACTAACCAGTACCCCGGAGCTCTTGAC-TCTACC  147
      ||||||||||||||||||||||||||| ||||||||||||||| ||||||
seq2  TGGAACAACATTATGAACTAACCAGTA-CCCGGAGCTCTTGACTTCTACC  145

seq1  TGCAT-ATGTATCAAAAGATGGCCTAGTCGGACATCACTGGAAAGAGAGG  196
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATAATGTATCAAAAGATGGCCTAGTCGGACATCACTGGAAAGAGAGG  195

seq1  CCCATTGGACTTGCAAACTTTATATGCTCCAGTACAGGGGAACGCCAGGG  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTGGACTTGCAAACTTTATATGCTCCAGTACAGGGGAACGCCAGGG  245

seq1  CCAAAAAGTGGCAGTGGGTTGGTAAGGGAGTGGGGGGAAGGTATGGGGGA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAAAGTGGCAGTGGGTTGGTAAGGGAGTGGGGGGAAGGTATGGGGGA  295

seq1  CTTTTGGGATAGCATTGGAAATGTAAATGAGGAAAATACCTAATTAAAAA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGGGATAGCATTGGAAATGTAAATGAGGAAAATACCTAATTAAAAA  345

seq1  ATGATTACTAAAATCAAATCAAACATTATTAATTAAAAAAATCACGGAAA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTACTAAAATCAAATCAAACATTATTAATTAAAAAAATCACGGAAA  395

seq1  ACACCAAACATTTGTATGAACAGAAAAATAAATGTACAGGAAGAGGAATT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCAAACATTTGTATGAACAGAAAAATAAATGTACAGGAAGAGGAATT  445

seq1  ACTGATTCCCTGAGGCTGAGTGTGGAAGGAGATAACGCTAAGAGAGCCCC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATTCCCTGAGGCTGAGTGTGGAAGGAGATAACGCTAAGAGAGCCCC  495

seq1  AATGACTGTGCATGTGCGTGGGTTTGTTTAGAGAGAAGATCAATCCCGAC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACTGTGCATGTGCGTGGGTTTGTTTAGAGAGAAGATCAATCCCGAC  545

seq1  ATTGGTGCTGCTGCTGCTTTCATATCATAAAGCAGTCAGGAATCCACTGA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGTGCTGCTGCTGCTTTCATATCATAAAGCAGTCAGGAATCCACTGA  595

seq1  TCTACAGGAAGCACTGACTCGTGCCATTCAAGCAGGGCATGAGCTTCCCA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACAGGAAGCACTGACTCGTGCCATTCAAGCAGGGCATGAGCTTCCCA  645

seq1  TATAATCAATAAAGCTGTTGATAAGCCTGAGTATAATACTTTCAAAAGGA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATCAATAAAGCTGTTGATAAGCCTGAGTATAATACTTTCAAAAGGA  695

seq1  GCAAGTTAAGAACAGTGTTTCATTAGATTCTGGGTCTCCTAGAAGTAACG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGTTAAGAACAGTGTTTCATTAGATTCTGGGTCTCCTAGAAGTAACG  745

seq1  TAAAGAAAAGAAAAATAAGGCTTTCCTAACTTATAGCCAATAGATCTGAA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAAAAGAAAAATAAGGCTTTCCTAACTTATAGCCAATAGATCTGAA  795

seq1  AGTTATAGGCATGGTGCGGCTCACTACCCTCTTTTTCTAGAAAATGCATA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATAGGCATGGTGCGGCTCACTACCCTCTTTTTCTAGAAAATGCATA  845

seq1  TGCAAGTTGATGACCAAAAATTCTTATGAGGGAGGCAGAGAAGGAGAATC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAGTTGATGACCAAAAATTCTTATGAGGGAGGCAGAGAAGGAGAATC  895

seq1  AGTCTTAAGTATGTCTAGCATCATGGAGACTTTCTGATTTAACTGCTTCG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTAAGTATGTCTAGCATCATGGAGACTTTCTGATTTAACTGCTTCG  945

seq1  CGATTGTGTTTCTTTGATAGCTTCATTGTAAGATCTGAACTTCATTTTCT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATTGTGTTTCTTTGATAGCTTCATTGTAAGATCTGAACTTCATTTTCT  995

seq1  TGCTCTTCACCTGTCAGTCCTGAATCCTCTGCTGCCCCCAGAGAATGTCA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTTCACCTGTCAGTCCTGAATCCTCTGCTGCCCCCAGAGAATGTCA  1045

seq1  ATTTTAGAGTTTCAGTTTTATATTATGTAACTAAATAAATTCACATGCCA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAGAGTTTCAGTTTTATATTATGTAACTAAATAAATTCACATGCCA  1095

seq1  CCAATTAACTTTTCCACTTGATTATTAGTCCTCAGTGAGGTGAATTC  1143
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATTAACTTTTCCACTTGATTATTAGTCCTCAGTGAGGTGAATTC  1142