BAC Information

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BAC

Clone NameB6Ng01-019G09
Chromosome14 (Build37)
Map Location 53,766,057 - 53,922,079
singlet/doubletdoublet
Overlap geneEG667635, LOC100043218, LOC100042568, LOC100043204, EG627424, LOC100043258, LOC100042574, LOC100042579, LOC100043269, LOC100043270, LOC100043274, EG667681, LOC100042593, EG193574, EG547424, LOC100042601, LOC100043282, A130082M07Rik, LOC100042607
Upstream geneRpgrip1, Supt16h, Chd8, Rab2b, Tox4, Mettl3, Sall2, Olfr1513, LOC193533, Olfr1512, Olfr1511, Olfr1510, OTTMUSG00000015242, Olfr1509, Olfr1508, Olfr1507, LOC671621, EG633692, LOC100042372, EG667441, LOC100042384, Trav5-1, EG667449, LOC671652, Trav6-2, LOC100042410, LOC546612, LOC627394, LOC100042419, Gm701, LOC382180, EG386506, LOC667476, LOC671927, LOC667481, LOC100042444, LOC640196, LOC627273, LOC100043177, LOC640931, EG627232, LOC100043186, LOC100042470, EG328482, LOC100042479, EG667525, LOC100043197, LOC100038850, LOC667542, EG667547, LOC100043214, EG667562, LOC100043202, LOC667574, Gm26, EG667583, Gm1489, C920008G01Rik, LOC667596, EG667604, LOC547329, LOC639655, LOC634322, EG636127, OTTMUSG00000015163, EG667626, LOC620297, LOC100042560
Downstream geneLOC100042614, LOC100042621, LOC100043319, EG547328, LOC100043308, LOC328483, EG667765, EG630061, LOC630086, EG436467, LOC100043322, OTTMUSG00000015124, A430107P09Rik, OTTMUSG00000015049, LOC100043325, A730076H11Rik, LOC627777, A630038E17Rik, EG626545, Dad1, Abhd4, Olfr49
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-019G09.bB6Ng01-019G09.g
ACCDH852492DH852493
length433623
definitionDH852492|Mus musculus domesticus DNA, BAC clone: B6Ng01-019G09, 5' end.DH852493|Mus musculus domesticus DNA, BAC clone: B6Ng01-019G09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(53,766,057 - 53,766,495)(53,921,457 - 53,922,079)
sequence
ctttaattagaagacagtctttcaaaagtcaaaggaaatgttttatacag
gtgtgttgtctggcacagagagaagctgtgcagtgcgaaatagtcctgat
ctataagatctcacttagagctggtaacagaaaagcaccagccactgaac
acggcaagtggctgcttgaggtaacaggaactattttaaatttaactcga
aatatgtgaaaacatttactttgtcccacactgactcagagcaaacgtct
cttgaactcatttttcacgaagatgtcagatttttactttgagcatctca
catcggaaaggtgtttattttttagcaattctttggtcactgtcaataac
cacaagatggcagcctcttcttatttattctggaggaaagtctcaagtgt
ttttgaataagagagtggtggggggagtgggag
gaattctttcggaaccactgcacagccctcatggtggtagtaaaattgca
tctcagagcagaaccggttccctcgtggaggctcagggctgaaggactct
gctccacctgatctcctctcacccctgcttggaaacagaaaagcaaccca
gaatcagagaggttttcatccacacaggtcaaatagccttccctgtgagg
atgaatgcgcatgagctctgtgtgagctctcttcctctccaccactgaca
tttctggagaatccttaataggaacttagctgagcacaactcacagcaaa
tctgcacccacagaatccccagcacagctcccaggttcctctgcatggcc
cctgtccaatcgctgggatgtattcactccacctctgaagggtgtcttgt
gcccagacacacttgtgcttacagactacaggttctctctgaatcaccga
gcttcctcattcagctgaacgcgaaactccacccacctctgccccatgac
tctgcattgtaattgctccaagaccgtgtaggacattgatgtagagccca
ggacactgtgtttctaatgtaacacgtaatataaaggagtttggggcggg
gcagggggtgaggatgtttgaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_53766057_53766495
seq2: B6Ng01-019G09.b_43_481

seq1  GAATTCCTTTAATTAGAAGACAGTCTTTCAAAAGTCAAAGGAAATGTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTAATTAGAAGACAGTCTTTCAAAAGTCAAAGGAAATGTTTT  50

seq1  ATACAGGTGTGTTGTCTGGCACAGAGAGAAGCTGTGCAGTGCGAAATAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGGTGTGTTGTCTGGCACAGAGAGAAGCTGTGCAGTGCGAAATAGT  100

seq1  CCTGATCTATAAGATCTCACTTAGAGCTGGTAACAGAAAAGCACCAGCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATCTATAAGATCTCACTTAGAGCTGGTAACAGAAAAGCACCAGCCA  150

seq1  CTGAACACGGCAAGTGGCTGCTTGAGGTAACAGGAACTATTTTAAATTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAACACGGCAAGTGGCTGCTTGAGGTAACAGGAACTATTTTAAATTTA  200

seq1  ACTCGAAATATGTGAAAACATTTACTTTGTCCCACACTGACTCAGAGCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCGAAATATGTGAAAACATTTACTTTGTCCCACACTGACTCAGAGCAA  250

seq1  ACGTCTCTTGAACTCATTTTTCACGAAGATGTCAGATTTTTACTTTGAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTCTCTTGAACTCATTTTTCACGAAGATGTCAGATTTTTACTTTGAGC  300

seq1  ATCTCACATCGGAAAGGTGTTTATTTTTTAGCAATTCTTTGGTCACTGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCACATCGGAAAGGTGTTTATTTTTTAGCAATTCTTTGGTCACTGTC  350

seq1  AATAACCACAAGATGGCAGCCTCTTCTTATTTATTCTGGAGGAAAGTCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACCACAAGATGGCAGCCTCTTCTTATTTATTCTGGAGGAAAGTCTC  400

seq1  AAGTGTTTTTGAATAAGAGAGTGGTGGGGGGAGTGGGAG  439
      |||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTTTTTGAATAAGAGAGTGGTGGGGGGAGTGGGAG  439

seq1: chr14_53921457_53922079
seq2: B6Ng01-019G09.g_68_690 (reverse)

seq1  TCTCAAACATCCTCACCCCCTGCCCCGCCCCAAACTCCTTTATATTACGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAACATCCTCACCCCCTGCCCCGCCCCAAACTCCTTTATATTACGT  50

seq1  GTTACATTAGAAACACAGTGTCCTGGGCTCTACATCAATGTCCTACACGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACATTAGAAACACAGTGTCCTGGGCTCTACATCAATGTCCTACACGG  100

seq1  TCTTGGAGCAATTACAATGCAGAGTCATGGGGCAGAGGTGGGTGGAGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGAGCAATTACAATGCAGAGTCATGGGGCAGAGGTGGGTGGAGTTT  150

seq1  CGCGTTCAGCTGAATGAGGAAGCTCGGTGATTCAGAGAGAACCTGTAGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCGTTCAGCTGAATGAGGAAGCTCGGTGATTCAGAGAGAACCTGTAGTC  200

seq1  TGTAAGCACAAGTGTGTCTGGGCACAAGACACCCTTCAGAGGTGGAGTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGCACAAGTGTGTCTGGGCACAAGACACCCTTCAGAGGTGGAGTGA  250

seq1  ATACATCCCAGCGATTGGACAGGGGCCATGCAGAGGAACCTGGGAGCTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATCCCAGCGATTGGACAGGGGCCATGCAGAGGAACCTGGGAGCTGT  300

seq1  GCTGGGGATTCTGTGGGTGCAGATTTGCTGTGAGTTGTGCTCAGCTAAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGGATTCTGTGGGTGCAGATTTGCTGTGAGTTGTGCTCAGCTAAGT  350

seq1  TCCTATTAAGGATTCTCCAGAAATGTCAGTGGTGGAGAGGAAGAGAGCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATTAAGGATTCTCCAGAAATGTCAGTGGTGGAGAGGAAGAGAGCTC  400

seq1  ACACAGAGCTCATGCGCATTCATCCTCACAGGGAAGGCTATTTGACCTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGAGCTCATGCGCATTCATCCTCACAGGGAAGGCTATTTGACCTGT  450

seq1  GTGGATGAAAACCTCTCTGATTCTGGGTTGCTTTTCTGTTTCCAAGCAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGATGAAAACCTCTCTGATTCTGGGTTGCTTTTCTGTTTCCAAGCAGG  500

seq1  GGTGAGAGGAGATCAGGTGGAGCAGAGTCCTTCAGCCCTGAGCCTCCACG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAGAGGAGATCAGGTGGAGCAGAGTCCTTCAGCCCTGAGCCTCCACG  550

seq1  AGGGAACCGGTTCTGCTCTGAGATGCAATTTTACTACCACCATGAGGGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAACCGGTTCTGCTCTGAGATGCAATTTTACTACCACCATGAGGGCT  600

seq1  GTGCAGTGGTTCCGAAAGAATTC  623
      |||||||||||||||||||||||
seq2  GTGCAGTGGTTCCGAAAGAATTC  623