BAC Information

Click to search

BAC

Clone NameB6Ng01-019G10
Chromosome14 (Build37)
Map Location 16,052,520 - 16,053,584
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042543, Olfr31, Il3ra, LOC627139, Olfr721-ps1, LOC667152, LOC100042147, Slc4a7, Nek10
Downstream geneLrrc3b, LOC667205, 1700062C10Rik, LOC667209
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-019G10.bB6Ng01-019G10.g
ACCDH852494DH852495
length1,048943
definitionDH852494|Mus musculus domesticus DNA, BAC clone: B6Ng01-019G10, 5' end.DH852495|Mus musculus domesticus DNA, BAC clone: B6Ng01-019G10, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttttgccaaagttgtgggatcaaatatggaacccagatgatgg
atgcagagcctacacctggtaggtgggctttaagaggagttggtgagcat
aacacatagggccaagtttaaactggagtcccttttgcatgagtaacctc
tgtgagttgtaacttttttttaattaattcagaattgttgatatggaacc
aggatataagtttaggagaagtccatgcagtgtgagtgaggttagcttcc
aatcctgcatctcaacttgtattttatcactgcctttttattctttacaa
tggttaggtaatggtgaccaaagctgggctacttcggtgagtgtttgtac
ccatattcccaatttctgaaatactgctctcagctcacatttttagtacc
actaagtgttttaaaactaacttttaattatataccttgcataataaaat
gtagtatttttgaccttctgaagtttgatttacaaatgacttctgaaata
gaacaactttataatttgggaaatatttatgcaatttttattcaagtagt
gaacatggtttcaatatacataatttttagtgttttggaaatatagagga
agctaaatttagaacacaatgacaagcctcactacatagaatatattgca
taaatatgaattatttgttcagttcttggggaaaagttgaaactgacaat
gatatatatatctaaaatatatattctagatatagtgaatgttttatgag
aagataaaattactatacgttgacaaaataaggtcttcttttccttggga
agttaattcagtgctgatgaataattttgtatttttggaagttatttttg
actctggcttctaataaagacttatcaccattaattattgccagcttcag
aatacacatattaataataatttgctatcagcccctgcctcactctctat
atcttactccagttctgaaatggagcactgatttctcctatttcctttaa
atagatattttctcattacattcacatggtatccaaaactcccctaaa
gaattctttgtttagctctgtactccatttttaatagggttatttggttt
tctggagtccaactacttgaattctttatatatattgtatattagtcccc
aatcagatttaagtttgataaagatcttttcccaatctcttggttgcctt
tttgtcttattgacagtatcctttgccttacagaagttttacattttatg
tcaaatgttaatcttacagcacaaactattgctgttctgttcagcaattt
ttcccctgtgcccatgtcttcgaggctcttccacactttcttctctataa
atttcagtgtctctggttttatgtggagtcccttgatccacgtagacttg
agctttgtacaaggagataagaatggatcaattcccattcgtctatgtgc
taactcccagttgagccagcaccatttgttgaaaatgctgtattttttcc
attgacttgtttagctactttgtcaaagatcaagtgaccatagttgtgtg
ggttcatttctgcatcttcaattctatcccattgatctacctgtctttca
tagaaccagcgccatgtagtttttttgttttttgttttttgttttttttt
ttttttttttatcacaattgctctgtagtacaggttgaggtcaggggatg
gctattccaccagaggttcttttattgttgagaatagtttttgctatcct
aggtttttttttatttcagatgaatttgcaaattgccctttctaactcat
gaagaattgagttggaattttgatggggattgcactgaatctgtagattg
ctttcaacaagatagccattttttctaatataatcctgccattccatgag
caggggagtcttccacctctgagggttttttctatcttgtgtcagagact
tgaagtctatcatatagaatcttcattgctcatgagagcgcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_16052520_16053584
seq2: B6Ng01-019G10.b_40_1083

seq1  GAATTCTTTTTGCCAAAGTTGTGGGATCAAATATGGAACCCAGATGATGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTTGCCAAAGTTGTGGGATCAAATATGGAACCCAGATGATGG  50

seq1  ATGCAGAGCCTACACCTGGTAGGTGGGCTTTAAGAGGAGTTGGTGAGCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGAGCCTACACCTGGTAGGTGGGCTTTAAGAGGAGTTGGTGAGCAT  100

seq1  AACACATAGGGCCAAGTTTAAACTGGAGTCCCTTTTGCATGAGTAACCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACATAGGGCCAAGTTTAAACTGGAGTCCCTTTTGCATGAGTAACCTC  150

seq1  TGTGAGTTGTAACTTTTTTTTAATTAATTCAGAATTGTTGATATGGAACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGTTGTAACTTTTTTTTAATTAATTCAGAATTGTTGATATGGAACC  200

seq1  AGGATATAAGTTTAGGAGAAGTCCATGCAGTGTGAGTGAGGTTAGCTTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATATAAGTTTAGGAGAAGTCCATGCAGTGTGAGTGAGGTTAGCTTCC  250

seq1  AATCCTGCATCTCAACTTGTATTTTATCACTGCCTTTTTATTCTTTACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTGCATCTCAACTTGTATTTTATCACTGCCTTTTTATTCTTTACAA  300

seq1  TGGTTAGGTAATGGTGACCAAAGCTGGGCTACTTCGGTGAGTGTTTGTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTAGGTAATGGTGACCAAAGCTGGGCTACTTCGGTGAGTGTTTGTAC  350

seq1  CCATATTCCCAATTTCTGAAATACTGCTCTCAGCTCACATTTTTAGTACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATATTCCCAATTTCTGAAATACTGCTCTCAGCTCACATTTTTAGTACC  400

seq1  ACTAAGTGTTTTAAAACTAACTTTTAATTATATACCTTGCATAATAAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGTGTTTTAAAACTAACTTTTAATTATATACCTTGCATAATAAAAT  450

seq1  GTAGTATTTTTGACCTTCTGAAGTTTGATTTACAAATGACTTCTGAAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTATTTTTGACCTTCTGAAGTTTGATTTACAAATGACTTCTGAAATA  500

seq1  GAACAACTTTATAATTTGGGAAATATTTATGCAATTTTTATTCAAGTAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAACTTTATAATTTGGGAAATATTTATGCAATTTTTATTCAAGTAGT  550

seq1  GAACATGGTTTCAATATACATAATTTTTAGTGTTTTGGAAATATAGAGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATGGTTTCAATATACATAATTTTTAGTGTTTTGGAAATATAGAGGA  600

seq1  AGCTAAATTTAGAACACAATGACAAGCCTCACTACATAGAATATATTGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAAATTTAGAACACAATGACAAGCCTCACTACATAGAATATATTGCA  650

seq1  TAAATATGAATTATTTGTTCAGTTCTTGGGGAAAAGTTGAAACTGACAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATGAATTATTTGTTCAGTTCTTGGGGAAAAGTTGAAACTGACAAT  700

seq1  GATATATATATCTAAAATATATATTCTAGATATAGTGAATGTTTTATGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATATATATCTAAAATATATATTCTAGATATAGTGAATGTTTTATGAG  750

seq1  AAGATAAAATTACTATACGTTGACAAAATAAGGTCTTCTTTTCCTTGGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATAAAATTACTATACGTTGACAAAATAAGGTCTTCTTTTCCTTGGGA  800

seq1  AGTTAATTCAGTGCTGATGAATAATTTTGTATTTTTGGAAGTTATTTTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAATTCAGTGCTGATGAATAATTTTGTATTTTTGGAAGTTATTTTTG  850

seq1  ACTCTGGCTTCTAATAAAGACTTATCACCATTAATTATTTGCCAGCTTCA  900
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ACTCTGGCTTCTAATAAAGACTTATCACCATTAATTA-TTGCCAGCTTCA  899

seq1  GAATTAACACATAGTTAATAATAATTTGCTATCAGCCCCTGCCTCACTCT  950
      ||||  ||||||| ||||||||||||||||||||||||||||||||||||
seq2  GAAT--ACACATA-TTAATAATAATTTGCTATCAGCCCCTGCCTCACTCT  946

seq1  CTATATCTTACTTCCAGTGCTGAAAATGAGCACATGATTTTTCTTTCTTT  1000
      ||||||||||| |||||| ||||||  |||||| |||||| ||       
seq2  CTATATCTTAC-TCCAGTTCTGAAATGGAGCAC-TGATTTCTC-------  987

seq1  TTTTTTCTTTTTTAAAATTAGATATTTTCTTCATTTACATTTCACATGCT  1050
       | |||| |||    || ||||||||||| ||| ||||| |||||||| |
seq2  CTATTTCCTTT----AAATAGATATTTTC-TCA-TTACA-TTCACATGGT  1030

seq1  ATCCCAAAACTCCCC  1065
      || ||||||||||||
seq2  AT-CCAAAACTCCCC  1044