BAC Information

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BAC

Clone NameB6Ng01-019G19
Chromosome14 (Build37)
Map Location 19,916,813 - 19,917,922
singlet/doubletsinglet
Overlap geneEG632477
Upstream geneLOC627608, Nr1d2, LOC632287, Rpl15, Nkiras1, Ube2e1, LOC627717, LOC238963, Ube2e2, LOC627741, LOC100042299, LOC675069, LOC100042322, LOC632470
Downstream geneEG632498, EG667341, LOC667344, LOC619996, EG434616, LOC675165, 1700110I01Rik, EG664814, LOC100039452, LOC100038983, LOC100039441, EG432825, LOC673583, EG664855, Nid2, 2700060E02Rik, LOC100039534, Gng2, 1810063B07Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-019G19.bB6Ng01-019G19.g
ACCDH852512DH852513
length1,2861,103
definitionDH852512|Mus musculus domesticus DNA, BAC clone: B6Ng01-019G19, 5' end.DH852513|Mus musculus domesticus DNA, BAC clone: B6Ng01-019G19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgacacacccagaatctcaggttcacaagagaccagaatcacag
gatcacagagaaagctggacactaaggagtcctgaatgaactgggattat
aggaaggacagactgcaatcagatatattgagggcagcaaacacttgaga
taatcagatggcaggacacaagcataagaacagaagcaacagaaaacaag
gttacttggcatcatcagaaacaaattctcccaccatagcaagtcctgga
tacagcatcacaccagaaaagcaaaatatggatctaaggtcacttctcat
gatgatgatggaggactttaagaaggaaataaataactcccttaaagaaa
tacaggaaaacacaggtaaacagctagaagctcttaaagaggaaacacaa
aaatcccttaaagagttacaggaaaacactaccaaacagttgaaagaatt
gaacaaaaccatccaggatctaaaaatggaagtagaaacaatgaagaaaa
cccaaagggagacaactctggaggtagaaatgctaggaaagaaatcagga
accatagatgtgagcatcagcaacagaatacaagagatggaagagagaat
ctcaggtgcagaagattccatagggaacatgaacacaacaatcaaagaaa
atgcaaaatgcaaaacgatcctaactcaaaacatccaggaaatccaggac
acaatgagaagaccaaacctaaggataataggagtagatgagaatgaaga
ttttccatttaaagggccagtaaatatcttcaacaaaattatagaagaaa
ccttcccaaacctaaagaaaaagatgattatgaacatacaagaggcctac
agaactccaaatagactgggtcagaaaagaaattcctcctgacacataat
gatcagagcaacaaaagcactaaataaggataggatattaaaagaagtaa
agggaaaaggtcaagtaacatatacaggcagacgtatcagaattacagaa
ggacttcttcaccaaagactattgaaagcagaagaatcctggacagatgt
ttttacagaaccctagaagagcacaaatttgcagccaggctacttaaccc
agccaaactctcattaccacagttggagaaaccaagtaatccatgccaaa
cggatttaacaaatatttcatggagcagcccttcaagatatataacgaat
atcatacatgggagggtaatgaaccttgaagcgagaagtaatcctcacaa
ccttaaaagagaaaaagtcctgagacaggaattcta
gaattctaaatgctgggattttcttaaccttgggaaacttgctatcgtgg
ccccagaacaccagaagctaggcatctagatggaaggtgccctggctccc
tgtgttcactcagtagggctggaagagcacactaaccaggtatgttctca
agagccttaggctacaagtctttgcccaccagacacctgtgattgtattt
cccctgttttcataaaagggattctaattctggataactaatactgtata
gacagctattacacataattgtggagatgaggccatacatcaccacagcc
ttataatctgcccaagggatacaaatgaatggacaattgttagtacatat
tcaaagtacattgctatttaaagtaggaactaccagacctcgggacccac
atcacctggaaactgttagggaggtaaatcctcaggggaaaaacacaggc
tgctagattccaaattgtggagaaaaataaaaacatataaaacctattca
cgtttgtacatgtgcacacacacaggttcacagacttagacctatacaca
agatggagaaagagaaagagtgagagaataaaaaagagagacagcgacaa
cgagaacacaatgagaggtagaagaaatgtacacaatattactgtctcag
tgtttaaggcacacagacaaagaggaacaggcatgaacctcgggccttct
aatcgagcactgagaagaaccaagatatgaatttcttgagttatttttag
gcatacacaactcttcacatggacaagatatttacatgtaagtctaacct
atgaaaccaactcttagaacaaggtatctggatttacatcaccacagaac
tactcagggtacccttgtcctcttgaatacgttttgcttggctgtcatct
aaaggatcatgcaatgcaacaacactatgtgggttctacttgctcaacat
gacatgcaaacctgcccctgttatgcatatcaagagtattgttcccctgt
ggcaccaatgaaaatgaataccctttggagtcttttatgtgttcctgctg
gacataagccttgttttacttagtgaccacataaataagacaaatgctac
taa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_19916813_19917922
seq2: B6Ng01-019G19.g_68_1170 (reverse)

seq1  TTAGTAAGCATTTGTCTACTTTTTATGT-GTACTTAAGTAAAACAAGGGC  49
      ||||| |||||||||||  | ||||||| ||   |||||||||||| |||
seq2  TTAGT-AGCATTTGTCT--TATTTATGTGGTCACTAAGTAAAACAA-GGC  46

seq1  TCATGTCCAGCAGGGGACACACATAAAAAGACT-CAAAGGATATTCATGT  98
      | ||||||||||||    |||||| |||||||| |||||| ||||||| |
seq2  TTATGTCCAGCAGG---AACACAT-AAAAGACTCCAAAGGGTATTCATTT  92

seq1  TCA-TAGTGACACAGTGGAACAATACTACTGATATGCATAACAGGGGCAG  147
      ||| | ||| ||||| |||||||||||  |||||||||||||||||||||
seq2  TCATTGGTGCCACAGGGGAACAATACTCTTGATATGCATAACAGGGGCAG  142

seq1  GTTTTGCATGTCATGTTGAGCAAGTAGAA-CCACATAGTGTTGGTGCATT  196
      | ||||||||||||||||||||||||||| ||||||||||||| ||||||
seq2  G-TTTGCATGTCATGTTGAGCAAGTAGAACCCACATAGTGTTGTTGCATT  191

seq1  GCATGATCCTTTAGATGACAGCCAAGCAAAACGTATTCCAAGAGGACAAG  246
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GCATGATCCTTTAGATGACAGCCAAGCAAAACGTATT-CAAGAGGACAAG  240

seq1  GGTACCCTGAGTAGTTCTGTGGTGATGTAAATTCCAGATACCTTGTTCTA  296
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GGTACCCTGAGTAGTTCTGTGGTGATGTAAA-TCCAGATACCTTGTTCTA  289

seq1  AGAGTTGGTTTCATAGGTTAGACTTACATGTAAATATCTTGTCCATGTGA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTGGTTTCATAGGTTAGACTTACATGTAAATATCTTGTCCATGTGA  339

seq1  AGAGTTGTGTATGCCTAAAAATAACTCAAGAAATTCATATCTTGGTTCTT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTGTGTATGCCTAAAAATAACTCAAGAAATTCATATCTTGGTTCTT  389

seq1  CTCAGTGCTCGATTAGAAGGCCCGAGGTTCATGCCTGTTCCTCTTTGTCT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTGCTCGATTAGAAGGCCCGAGGTTCATGCCTGTTCCTCTTTGTCT  439

seq1  GTGTGCCTTAAACACTGAGACAGTAATATTGTGTACATTTCTTCTACCTC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCCTTAAACACTGAGACAGTAATATTGTGTACATTTCTTCTACCTC  489

seq1  TCATTGTGTTCTCGTTGTCGCTGTCTCTCTTTTTTATTCTCTCACTCTTT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGTGTTCTCGTTGTCGCTGTCTCTCTTTTTTATTCTCTCACTCTTT  539

seq1  CTCTTTCTCCATCTTGTGTATAGGTCTAAGTCTGTGAACCTGTGTGTGTG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTCTCCATCTTGTGTATAGGTCTAAGTCTGTGAACCTGTGTGTGTG  589

seq1  CACATGTACAAACGTGAATAGGTTTTATATGTTTTTATTTTTCTCCACAA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGTACAAACGTGAATAGGTTTTATATGTTTTTATTTTTCTCCACAA  639

seq1  TTTGGAATCTAGCAGCCTGTGTTTTTCCCCTGAGGATTTACCTCCCTAAC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAATCTAGCAGCCTGTGTTTTTCCCCTGAGGATTTACCTCCCTAAC  689

seq1  AGTTTCCAGGTGATGTGGGTCCCGAGGTCTGGTAGTTCCTACTTTAAATA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCCAGGTGATGTGGGTCCCGAGGTCTGGTAGTTCCTACTTTAAATA  739

seq1  GCAATGTACTTTGAATATGTACTAACAATTGTCCATTCATTTGTATCCCT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGTACTTTGAATATGTACTAACAATTGTCCATTCATTTGTATCCCT  789

seq1  TGGGCAGATTATAAGGCTGTGGTGATGTATGGCCTCATCTCCACAATTAT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCAGATTATAAGGCTGTGGTGATGTATGGCCTCATCTCCACAATTAT  839

seq1  GTGTAATAGCTGTCTATACAGTATTAGTTATCCAGAATTAGAATCCCTTT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAATAGCTGTCTATACAGTATTAGTTATCCAGAATTAGAATCCCTTT  889

seq1  TATGAAAACAGGGGAAATACAATCACAGGTGTCTGGTGGGCAAAGACTTG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAAAACAGGGGAAATACAATCACAGGTGTCTGGTGGGCAAAGACTTG  939

seq1  TAGCCTAAGGCTCTTGAGAACATACCTGGTTAGTGTGCTCTTCCAGCCCT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTAAGGCTCTTGAGAACATACCTGGTTAGTGTGCTCTTCCAGCCCT  989

seq1  ACTGAGTGAACACAGGGAGCCAGGGCACCTTCCATCTAGATGCCTAGCTT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGTGAACACAGGGAGCCAGGGCACCTTCCATCTAGATGCCTAGCTT  1039

seq1  CTGGTGTTCTGGGGCCACGATAGCAAGTTTCCCAAGGTTAAGAAAATCCC  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGTTCTGGGGCCACGATAGCAAGTTTCCCAAGGTTAAGAAAATCCC  1089

seq1  AGCATTTAGAATTC  1110
      ||||||||||||||
seq2  AGCATTTAGAATTC  1103