BAC Information

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BAC

Clone NameB6Ng01-019I09
Chromosome14 (Build37)
Map Location 95,609,299 - 95,610,331
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043356, LOC100043783, LOC677613
Downstream geneLOC100043784, LOC382931, 4921530L21Rik, Klhl1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-019I09.bB6Ng01-019I09.g
ACCDH852584DH852585
length3171,015
definitionDH852584|Mus musculus domesticus DNA, BAC clone: B6Ng01-019I09, 5' end.DH852585|Mus musculus domesticus DNA, BAC clone: B6Ng01-019I09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
acctaccctcagtatctcaagattatataagccttgaatcacccaagtaa
cattgatttgagtctgtgatgctggtcccagtgtatcactgtatgtactc
accgggcttccagtggctctgttatgccatcattgcttccattacccttg
tggaccatatggggcgatgctgcctaagggcacaggaagctacaggcatt
gtcccttctgatgctatttttcagaatattttatgcatttataaatttta
aaaagtctggtatatttatgagctaaagtaatctcactttaggcactttg
ggggggggtgtatggta

gaattccttgtgaaaccttaggtccatgcaaatacatagaaagtaggact
aaacaactgaagatataaggaaacattaaaataaattaaactgaagagat
caaattatttaagcaccaaattatatgcatatatgtacacatacacacac
acacacactcacacacacacatacacacacacacacacacacacatatat
atgtttagtttagttttaaaatatgtgatttttcacttttagtgaatgaa
taaaatgagctaaaatatggtagttttcttagggttttactgctgtgaac
agacatcatgaccaaggcaagtcttataaaggacatcattatttggggct
ggcttacaggttcagaggttcacttcagtatcatcaaggcaggcacagta
caggaggagctgagagttctatatctgcatctaaagactgctaacagaat
actgactgtcagtcagcttaggaataggcttaaagcccaagcccatagtg
acacacctactccaacaaggccacaccttccaatagttccagtccctgtg
tcaagcatacacaaaccatcacagtagtttcattcattcacaaattattg
actgggaaaagcaatgtcaaaccatgggtacaaatgcaatgacaggaaaa
gataaaggaaaaggtatacaatatactttttaatcaaagcatcaaaaatg
atttcaacaacatgattggtcaaatgtgagctgaaccgtgatgagaaaaa
tgaacatgccacgctgcctggagaagagccagcatagcctcaccccacac
aaagtactagaggcagtgaagaatgctggaaaccagagagggccttttca
ccagagagagacatcagttgctattcagtgtcaagcagtcatttcagagt
cagtcccatgtcaaacattattgtggatggattatggaatagaagctgaa
tttagagtgctatgtgatacatcctccatccttcatcatacatacaactt
gaaaaccattattga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_95609299_95610331
seq2: B6Ng01-019I09.g_70_1084

seq1  GAATTCCTTGTGAAACCTTAGGTCCATGCAAATACATAGAAAGTAGGACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTGTGAAACCTTAGGTCCATGCAAATACATAGAAAGTAGGACT  50

seq1  AAACAACTGAAGATATAAGGAAACATTAAAATAAATTAAACTGAAGAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAACTGAAGATATAAGGAAACATTAAAATAAATTAAACTGAAGAGAT  100

seq1  CAAATTATTTAAGCACCAAATTATATGCATATATGTACACATACACACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTATTTAAGCACCAAATTATATGCATATATGTACACATACACACAC  150

seq1  ACACACACTCACACACACACATACACACACACACACACACACACATATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACTCACACACACACATACACACACACACACACACACACATATAT  200

seq1  ATGTTTAGTTTAGTTTTAAAATATGTGATTTTTCACTTTTAGTGAATGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTAGTTTAGTTTTAAAATATGTGATTTTTCACTTTTAGTGAATGAA  250

seq1  TAAAATGAGCTAAAATATGGTAGTTTTCTTAGGGTTTTACTGCTGTGAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATGAGCTAAAATATGGTAGTTTTCTTAGGGTTTTACTGCTGTGAAC  300

seq1  AGACATCATGACCAAGGCAAGTCTTATAAAGGACATCATTATTTGGGGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATCATGACCAAGGCAAGTCTTATAAAGGACATCATTATTTGGGGCT  350

seq1  GGCTTACAGGTTCAGAGGTTCACTTCAGTATCATCAAGGCAGGCACAGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTACAGGTTCAGAGGTTCACTTCAGTATCATCAAGGCAGGCACAGTA  400

seq1  CAGGAGGAGCTGAGAGTTCTATATCTGCATCTAAAGACTGCTAACAGAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGGAGCTGAGAGTTCTATATCTGCATCTAAAGACTGCTAACAGAAT  450

seq1  ACTGACTGTCAGTCAGCTTAGGAATAGGCTTAAAGCCCAAGCCCATAGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGACTGTCAGTCAGCTTAGGAATAGGCTTAAAGCCCAAGCCCATAGTG  500

seq1  ACACACCTACTCCAACAAGGCCACACCTTCCAATAGTTCCAGTCCCTGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACCTACTCCAACAAGGCCACACCTTCCAATAGTTCCAGTCCCTGTG  550

seq1  TCAAGCATACACAAACCATCACAGTAG-TTCATTCATTCACAAATTATTG  599
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TCAAGCATACACAAACCATCACAGTAGTTTCATTCATTCACAAATTATTG  600

seq1  ACTGGGAAAAGCAATGTCAAACCATGGGTACAAATGCAATGACAGGAAAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGAAAAGCAATGTCAAACCATGGGTACAAATGCAATGACAGGAAAA  650

seq1  GATTAAGGAAAAGGTATACAATATACTTTTTAATCAAAGCATCAAAAATG  699
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAAGGAAAAGGTATACAATATACTTTTTAATCAAAGCATCAAAAATG  700

seq1  ATTTCAACAACATGATTGGTCAAATGTGAGCTGAACCGTGATGAGAAAAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAACAACATGATTGGTCAAATGTGAGCTGAACCGTGATGAGAAAAA  750

seq1  TGAACATGCCACGCTGCCTGGAGAAGAGCCAGCATAGCCTCAACCCCACA  799
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TGAACATGCCACGCTGCCTGGAGAAGAGCCAGCATAGCCTC-ACCCCACA  799

seq1  CAAAGTACTAGAGGCAAGTGAAGAATGCTGGAAACCAGAGAGGGCCTTTT  849
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CAAAGTACTAGAGGC-AGTGAAGAATGCTGGAAACCAGAGAGGGCCTTTT  848

seq1  CACCAGAGAAGAGGACATCAGTTGCTTATTCAGTGTCAAGCAGTCATTTC  899
      |||||||| ||| |||||||||||| ||||||||||||||||||||||| 
seq2  CACCAGAG-AGA-GACATCAGTTGC-TATTCAGTGTCAAGCAGTCATTT-  894

seq1  CAGAGTCAGTCCCATGTCAAAACATATATGTGGATGGATTTATGGAATAG  949
      |||||||||||||||||| ||||||   |||||||||| |||||||||||
seq2  CAGAGTCAGTCCCATGTC-AAACATTATTGTGGATGGA-TTATGGAATAG  942

seq1  AAAGCTGATATTTAGGAGTGCATATGTGTATACATCCATCCATCCATACA  999
       ||||||| ||||| |||||| |||||| |||||||| ||||||| | ||
seq2  -AAGCTGA-ATTTA-GAGTGC-TATGTG-ATACATCC-TCCATCC-TTCA  985

seq1  TACATACATACATACTTGAAATAACAATTATTGA  1033
      | |||||||||| |||||||  ||| ||||||||
seq2  T-CATACATACA-ACTTGAA--AACCATTATTGA  1015


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