BAC Information

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BAC

Clone NameB6Ng01-019L06
Chromosome14 (Build37)
Map Location 78,350,138 - 78,523,763
singlet/doubletdoublet
Overlap geneEpsti1, AU021034
Upstream geneLOC100043201, 9030625A04Rik, Ccdc122, D230005D02Rik, LOC100043755, LOC676171, EG629678, Gm1587, Dnajc15
Downstream geneTnfsf11, LOC219180, Akap11, Dgkh, LOC673649, 1300010F03Rik, LOC629709
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-019L06.bB6Ng01-019L06.g
ACCDH852716DH852717
length1,1031,048
definitionDH852716|Mus musculus domesticus DNA, BAC clone: B6Ng01-019L06, 5' end.DH852717|Mus musculus domesticus DNA, BAC clone: B6Ng01-019L06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(78,522,660 - 78,523,763)(78,350,138 - 78,351,192)
sequence
gaattcaatgtgggagagagaaagagagcccagacagaagaaagcacaac
agcagagaacgggccatcgtgtaagaagccaggctgccagaggtcaggat
gaatctgagtccacatccaagggtacaggccctcaaggtcaagttaaaga
gatggaatatccatcaaagccaagggaagtcattgaagtatttttacatc
tctcagatctggaggggcaaatgacctgaagcagaaaaaggctgaaaatg
taaagacccaagctttccagagtcctggaaaaatcataacagaagctaga
gatgggacgatgatgctggagttgatcagacacaaatgtaccagaaagct
aggaggtgatatctaaaatcacagggaaagactgtctgttagagagtgat
caagatggtgtccagatagaagactatgccaaggaagggcaatgacctca
gagtctgaatgtgcagggaagcctgtgggcaaaaggagaccgtatgtcct
tgttttcattgggtacagcagaggaaagtgaagggcagggcaccgattct
cttcctccgccaatagatgggtacttaagaagtgacagagtagtctggaa
gcctgagaaggaccttggatgtaagactatcatggctttcccttcagtag
gggcagagggacctgcaatggaagttcttggaggtgatggaactcgtgga
tgactaagacctctgggggtctgagagctgtccctggatggatcagtgta
aacaaaacagagcagagggaagatacaggctggtctatgggtctcagtac
agggaagccccttgctttttgaccagagatccaccagtaagtcttattta
tactcccttgctttggttcttcaagaaaggtgacctccttggtacctggt
agtagtttcacagattttaagacagtcgtgttgacagattttttctaagg
cactgagttggaaacgccagcaattgagtgattatttcccatcacttaag
agcattcctcagagaagaagactatagttgaattcccagggccagcaaag
ctgaaggttgtgagtgcttgcttgtctaagtgagaaattctagcactggt
gga
gaattcagtatttaagactttagctctctgtggaaggaagtgtttcttaa
aatcaggctcaaacagatggatgatttgacaaattgtattgaaccaacat
agatagaatgtaatgatatgttgtaattttggggtttattcatttctaaa
cattatataaatcccagaagcagtgaagaaaataaaaagacttaagaaca
taatactttcaactttatagtggaaggcatagtgaacaaaaactacatgt
aaatgatgatctaaaagcaaatattacctaaaacatagtgggataaagac
ccaattcacaagaaattcttccacaatatgaaaaagctaactctaagaaa
actgacaaaagttcttaaataagcaatcaagaggaaaatatttagaaagc
ataaatacaaattttgtcattgcaatgagaaaagtatcaatgtattgata
aaaagcatcaggaaacatgctttcattgattgacaatgagtacctagtat
gtgcccagcactgtcctaggttctgtgaatattctgtgagcaagtgaata
ttattccatgactaaatgtggaaatttagattatggacaggttgccaaag
atatacacaggtggtggtcattctttaatggagcacaggggtggagagat
atacagtgaccaaagagaaaagggactcagaggagtgaatctccttagta
taataggggcagcctgattccctgagaagttgacactggaacatatgcaa
atttttgagcaaatgtgcaggacatgcagacttagaaattgctatgctgc
tataatccatggaggtagatgaccataacttcggaaagacggtagatttg
agagaagatccagggtagaagagctctatcatttagagttttgattgtgt
ggaagaacatctgagaagaagagtgatagggtcatgaaatcaagagagac
acatttctcaaaggaaagactttcagtctcctttattgctaaaagagagt
aagtctggcatgctagcaacaatacagaggttctttgctcaggaatga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_78522660_78523763
seq2: B6Ng01-019L06.b_46_1148 (reverse)

seq1  TCCACCATGTGCTAGAATTTCTCACCTAAGACCAGGCCAGCACTCAC-AC  49
      ||||||| |||||||||||||||| || ||| || || ||||||||| ||
seq2  TCCACCA-GTGCTAGAATTTCTCA-CTTAGA-CAAGCAAGCACTCACAAC  47

seq1  CCTCAGCCTTGCTTGGCCCTGGGAATTC-ACTATAGTCTTCTTCTCTGAG  98
      | ||||| |||| ||||||||||||||| |||||||||||||||||||||
seq2  CTTCAGCTTTGC-TGGCCCTGGGAATTCAACTATAGTCTTCTTCTCTGAG  96

seq1  G-ATGCTCTTTAGTGATGGGGAAATAATCACTCAATTGCTGGCGTTTCCA  147
      | |||||||| |||||| ||||||||||||||||||||||||||||||||
seq2  GAATGCTCTTAAGTGAT-GGGAAATAATCACTCAATTGCTGGCGTTTCCA  145

seq1  ACTCAGTGCCTTAG-AAAAATCTGTCAACACGACTGTCTTAAAATCTGTG  196
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  ACTCAGTGCCTTAGAAAAAATCTGTCAACACGACTGTCTTAAAATCTGTG  195

seq1  AAACTACTACCAGGTACCAAGGAGGTCACCTTTCTTGAAGAACCAAAGCA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTACTACCAGGTACCAAGGAGGTCACCTTTCTTGAAGAACCAAAGCA  245

seq1  AGGGAGTATAAATAAGACTTACTGGTGGATCTCTGGTCAAAAAGCAAGGG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGTATAAATAAGACTTACTGGTGGATCTCTGGTCAAAAAGCAAGGG  295

seq1  GCTTCCCTGTACTGAGACCCATAGACCAGCCTGTATCTTCCCTCTGCTCT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCCTGTACTGAGACCCATAGACCAGCCTGTATCTTCCCTCTGCTCT  345

seq1  GTTTTGTTTACACTGATCCATCCAGGGACAGCTCTCAGACCCCCAGAGGT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTTTACACTGATCCATCCAGGGACAGCTCTCAGACCCCCAGAGGT  395

seq1  CTTAGTCATCCACGAGTTCCATCACCTCCAAGAACTTCCATTGCAGGTCC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTCATCCACGAGTTCCATCACCTCCAAGAACTTCCATTGCAGGTCC  445

seq1  CTCTGCCCCTACTGAAGGGAAAGCCATGATAGTCTTACATCCAAGGTCCT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCCCCTACTGAAGGGAAAGCCATGATAGTCTTACATCCAAGGTCCT  495

seq1  TCTCAGGCTTCCAGACTACTCTGTCACTTCTTAAGTACCCATCTATTGGC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGGCTTCCAGACTACTCTGTCACTTCTTAAGTACCCATCTATTGGC  545

seq1  GGAGGAAGAGAATCGGTGCCCTGCCCTTCACTTTCCTCTGCTGTACCCAA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAAGAGAATCGGTGCCCTGCCCTTCACTTTCCTCTGCTGTACCCAA  595

seq1  TGAAAACAAGGACATACGGTCTCCTTTTGCCCACAGGCTTCCCTGCACAT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAACAAGGACATACGGTCTCCTTTTGCCCACAGGCTTCCCTGCACAT  645

seq1  TCAGACTCTGAGGTCATTGCCCTTCCTTGGCATAGTCTTCTATCTGGACA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGACTCTGAGGTCATTGCCCTTCCTTGGCATAGTCTTCTATCTGGACA  695

seq1  CCATCTTGATCACTCTCTAACAGACAGTCTTTCCCTGTGATTTTAGATAT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTTGATCACTCTCTAACAGACAGTCTTTCCCTGTGATTTTAGATAT  745

seq1  CACCTCCTAGCTTTCTGGTACATTTGTGTCTGATCAACTCCAGCATCATC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCCTAGCTTTCTGGTACATTTGTGTCTGATCAACTCCAGCATCATC  795

seq1  GTCCCATCTCTAGCTTCTGTTATGATTTTTCCAGGACTCTGGAAAGCTTG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCATCTCTAGCTTCTGTTATGATTTTTCCAGGACTCTGGAAAGCTTG  845

seq1  GGTCTTTACATTTTCAGCCTTTTTCTGCTTCAGGTCATTTGCCCCTCCAG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTTTACATTTTCAGCCTTTTTCTGCTTCAGGTCATTTGCCCCTCCAG  895

seq1  ATCTGAGAGATGTAAAAATACTTCAATGACTTCCCTTGGCTTTGATGGAT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAGAGATGTAAAAATACTTCAATGACTTCCCTTGGCTTTGATGGAT  945

seq1  ATTCCATCTCTTTAACTTGACCTTGAGGGCCTGTACCCTTGGATGTGGAC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCATCTCTTTAACTTGACCTTGAGGGCCTGTACCCTTGGATGTGGAC  995

seq1  TCAGATTCATCCTGACCTCTGGCAGCCTGGCTTCTTACACGATGGCCCGT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATTCATCCTGACCTCTGGCAGCCTGGCTTCTTACACGATGGCCCGT  1045

seq1  TCTCTGCTGTTGTGCTTTCTTCTGTCTGGGCTCTCTTTCTCTCTCCCACA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGCTGTTGTGCTTTCTTCTGTCTGGGCTCTCTTTCTCTCTCCCACA  1095

seq1  TTGAATTC  1104
      ||||||||
seq2  TTGAATTC  1103

seq1: chr14_78350138_78351192
seq2: B6Ng01-019L06.g_70_1117

seq1  GAATTCAGTATTTAAGACTTTAGCTCTCTGTGGAAGGAAGTGTTTCTTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTATTTAAGACTTTAGCTCTCTGTGGAAGGAAGTGTTTCTTAA  50

seq1  AATCAGGCTCAAACAGATGGATGATTTGACAAATTGTATTGAACCAACAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGGCTCAAACAGATGGATGATTTGACAAATTGTATTGAACCAACAT  100

seq1  AGATAGAATGTAATGATATGTTGTAATTTTGGGGTTTATTCATTTCTAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGAATGTAATGATATGTTGTAATTTTGGGGTTTATTCATTTCTAAA  150

seq1  CATTATATAAATCCCAGAAGCAGTGAAGAAAATAAAAAGACTTAAGAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATATAAATCCCAGAAGCAGTGAAGAAAATAAAAAGACTTAAGAACA  200

seq1  TAATACTTTCAACTTTATAGTGGAAGGCATAGTGAACAAAAACTACATGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATACTTTCAACTTTATAGTGGAAGGCATAGTGAACAAAAACTACATGT  250

seq1  AAATGATGATCTAAAAGCAAATATTACCTAAAACATAGTGGGATAAAGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGATGATCTAAAAGCAAATATTACCTAAAACATAGTGGGATAAAGAC  300

seq1  CCAATTCACAAGAAATTCTTCCACAATATGAAAAAGCTAACTCTAAGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATTCACAAGAAATTCTTCCACAATATGAAAAAGCTAACTCTAAGAAA  350

seq1  ACTGACAAAAGTTCTTAAATAAGCAATCAAGAGGAAAATATTTAGAAAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGACAAAAGTTCTTAAATAAGCAATCAAGAGGAAAATATTTAGAAAGC  400

seq1  ATAAATACAAATTTTGTCATTGCAATGAGAAAAGTATCAATGTATTGATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATACAAATTTTGTCATTGCAATGAGAAAAGTATCAATGTATTGATA  450

seq1  AAAAGCATCAGGAAACATGCTTTCATTGATTGACAATGAGTACCTAGTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCATCAGGAAACATGCTTTCATTGATTGACAATGAGTACCTAGTAT  500

seq1  GTGCCCAGCACTGTCCTAGGTTCTGTGAATATTCTGTGAGCAAGTGAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCCAGCACTGTCCTAGGTTCTGTGAATATTCTGTGAGCAAGTGAATA  550

seq1  TTATTCCATGACTAAATGTGGAAATTTAGATTATGGACAGGTTGCCAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCCATGACTAAATGTGGAAATTTAGATTATGGACAGGTTGCCAAAG  600

seq1  ATATACACAGGTGGTGGTCATTCTTTAATGGAGCACAGGGGTGGAGAGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACACAGGTGGTGGTCATTCTTTAATGGAGCACAGGGGTGGAGAGAT  650

seq1  ATACAGTGACC-AAGAGAAAAGGGACTCAGAGGAGTGAATCTCCTTAGTA  699
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  ATACAGTGACCAAAGAGAAAAGGGACTCAGAGGAGTGAATCTCCTTAGTA  700

seq1  TAATAGGGGCAGCCTGATTCCCTGAGAAGTTGACACTGGAACATATGCAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGGGGCAGCCTGATTCCCTGAGAAGTTGACACTGGAACATATGCAA  750

seq1  A-TTTTGAGCAAATGTGCAGGACATGCAGACTTAGAAATTGCTATGCTGC  798
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGAGCAAATGTGCAGGACATGCAGACTTAGAAATTGCTATGCTGC  800

seq1  TATAATCCATGGAGGTAGATGACCATAACTTCGGAAAGACGGTAGATTTG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATCCATGGAGGTAGATGACCATAACTTCGGAAAGACGGTAGATTTG  850

seq1  AGAGAAGATCCAGGGTAGAAGAGCTCTATCATTTAGAGTTTTGATTGATG  898
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AGAGAAGATCCAGGGTAGAAGAGCTCTATCATTTAGAGTTTTGATTG-TG  899

seq1  TGGAAGAACATCTGAGAAGAAGAGTGATAGGGTCATGAAAATCAAGAGAG  948
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TGGAAGAACATCTGAGAAGAAGAGTGATAGGGTCATG-AAATCAAGAGAG  948

seq1  ACACA-TTCTCAAAAGGAGAGAACTTTCAGTTCTCCATTATTGCTAAGAG  997
      ||||| ||||| |||||| || |||||||| ||||| |||||||||| | 
seq2  ACACATTTCTC-AAAGGAAAG-ACTTTCAG-TCTCCTTTATTGCTAA-AA  994

seq1  GAGAAGTCAAGTCTGGCCATGCTAGCAACCAAGACAGAGGTTCTTGGCTC  1047
      ||| ||| |||||||| ||||||||||| ||| |||||||||||| ||||
seq2  GAG-AGT-AAGTCTGG-CATGCTAGCAA-CAATACAGAGGTTCTTTGCTC  1040

seq1  AGGGATGA  1055
      ||| ||||
seq2  AGGAATGA  1048