BAC Information

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BAC

Clone NameB6Ng01-019L12
Chromosome14 (Build37)
Map Location 113,131,886 - 113,267,271
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100043501, EG223186
Downstream geneLOC100043509, Tpm3-rs7, LOC100043510
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-019L12.bB6Ng01-019L12.g
ACCDH852726DH852727
length1,135955
definitionDH852726|Mus musculus domesticus DNA, BAC clone: B6Ng01-019L12, 5' end.DH852727|Mus musculus domesticus DNA, BAC clone: B6Ng01-019L12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(113,131,886 - 113,133,029)(113,266,346 - 113,267,271)
sequence
gaattcttcttcaatcattttctcatttgcctataggaaagctactaatt
attttttgagttaactttgtatcccagtattgttcttaaactgtttatct
gctgtaggagtttcccagttaaattattagggttgcttatggatgttatc
atataatctgcaaataaatacttttacttctctccttccggaattcactg
tcttgatctccctcagctgttttattgatctagctaagacttcaagtact
ggattgaatagttataaagagaaggggcaactttgttttcttcccgatgt
tactggaaatgcttggaatttctctctgtttatgttggtaatgtctaact
gcttaatgcaaaatgctgttatcatgttgagttatgtcctttgaatctta
gttctccaggacttttatcatgaagcgcttttgattttgtcaaagccaaa
catgttgacagtgaatttcagccatcacaggaaaactatttatagtaaaa
tgttcttcttctttttataatctgaaagtcaagtgacatcatcattatgt
aactgaacatttactgttgtttctatgatacaccatctgtgttatctgtt
gtactttgataaactttttgccccaaatctcatagatggttgatttttag
tattaccaccattgcttatgtatttttcatttcgatttctttaactacat
gaggttgagtgcattttcataagactttttggcacacattttctgtaaca
tccagtaatactattaatatttgttttgttttcttgaatgactaagtatt
gctctgaaattttaatgtgctacagatatttcatatgtttcatttgaatt
tgttgaaacttttattcaaaagcaatattccacacattcattccatggac
cggccaccagtcagcctctctcaatccgtggggaatcaggatccagcagt
gtgcgtggatcggcaagaattgacagacagacagacacaggagtgcggat
ctgaatgtattttgtcccaaagtggggcataagttcttataaatgacttt
aacagaagcactgcgataaaattcaatattaacactgggatcataaagca
gccccacttaaggtcagttattctatgaagtcagg
gaattctttccacaggtccacatgcaattttcacttccccattgtttaat
aattgttaaattattaaactgtcatggatcttaatcataaggtgcaagag
taaaagcgtttacagctaagtgtgtttgaaaacaaatcatcctggactag
tagtcctgggttctatatgagagcaagctgagcaagccagtggaggcaag
ccagtaaagaacatccctccatagcctctgtatcagctcctgcttcctga
cctggttgagttccagtcctgatttcctttggtgatgaacaacagtgtgg
aaatgtaagcttaataaaccctttcctctctaacttgcttcttggtcatg
atgttgtgaaggaatagaaactctgactgaggcagtgtatatgttcacca
tacacctttgcactcaatttgtgcatgtttcacctttcaccaatcagaat
ggctaagatcaaacgctcatgggaaaacacaccctggagagtgtgtgctg
caaggggaacactcctatactgcgggtgggagtgaaaactcggggaacca
ctctgcaaaataatttgttggcttctcagaaaattgggaatatttgtatc
ttaagacccagctctacgactcctaggcagatatcaatttttaaatgtta
cttcacttaggtctagtaaatactggttccagagttgctttttaaatttc
aacataaatttcaacatataattacattcactatatattttatacttatt
ctatctctaattaaaaaatgccatatgcaaatagtgtaaaaaacagcttt
aacatccagggtaaactgtgacagggcatagagtttgtaatagactgggg
ctagcaaatgttccttggagggccaggaaaaaataaacagaaagaagaga
aaagggaaagagtcatacacagatacacagatacatgcacgcgcacgtgc
gcacg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_113131886_113133029
seq2: B6Ng01-019L12.b_44_1178

seq1  GAATTCTTCTTCAATCATTTTCTCATTTGCCTATAGGAAAGCTACTAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTTCAATCATTTTCTCATTTGCCTATAGGAAAGCTACTAATT  50

seq1  ATTTTTTGAGTTAACTTTGTATCCCAGTATTGTTCTTAAACTGTTTATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTGAGTTAACTTTGTATCCCAGTATTGTTCTTAAACTGTTTATCT  100

seq1  GCTGTAGGAGTTTCCCAGTTAAATTATTAGGGTTGCTTATGGATGTTATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTAGGAGTTTCCCAGTTAAATTATTAGGGTTGCTTATGGATGTTATC  150

seq1  ATATAATCTGCAAATAAATACTTTTACTTCTCTCCTTCCGGAATTCACTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAATCTGCAAATAAATACTTTTACTTCTCTCCTTCCGGAATTCACTG  200

seq1  TCTTGATCTCCCTCAGCTGTTTTATTGATCTAGCTAAGACTTCAAGTACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGATCTCCCTCAGCTGTTTTATTGATCTAGCTAAGACTTCAAGTACT  250

seq1  GGATTGAATAGTTATAAAGAGAAGGGGCAACTTTGTTTTCTTCCCGATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTGAATAGTTATAAAGAGAAGGGGCAACTTTGTTTTCTTCCCGATGT  300

seq1  TACTGGAAATGCTTGGAATTTCTCTCTGTTTATGTTGGTAATGTCTAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGGAAATGCTTGGAATTTCTCTCTGTTTATGTTGGTAATGTCTAACT  350

seq1  GCTTAATGCAAAATGCTGTTATCATGTTGAGTTATGTCCTTTGAATCTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAATGCAAAATGCTGTTATCATGTTGAGTTATGTCCTTTGAATCTTA  400

seq1  GTTCTCCAGGACTTTTATCATGAAGCGCTTTTGATTTTGTCAAAGCCAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCCAGGACTTTTATCATGAAGCGCTTTTGATTTTGTCAAAGCCAAA  450

seq1  CATGTTGACAGTGAATTTCAGCCATCACAGGAAAACTATTTATAGTAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTGACAGTGAATTTCAGCCATCACAGGAAAACTATTTATAGTAAAA  500

seq1  TGTTCTTCTTCTTTTTATAATCTGAAAGTCAAGTGACATCATCATTATGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTTCTTCTTTTTATAATCTGAAAGTCAAGTGACATCATCATTATGT  550

seq1  AACTGAACATTTACTGTTGTTTCTATGATACACCATCTGTGTTATCTGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAACATTTACTGTTGTTTCTATGATACACCATCTGTGTTATCTGTT  600

seq1  GTACTTTGATAAACTTTTTGCCCCAAATCTCATAGATGGTTGATTTTTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTTTGATAAACTTTTTGCCCCAAATCTCATAGATGGTTGATTTTTAG  650

seq1  TATTACCACCATTGCTTATGTATTTTTCATTTCGATTTCTTTAACTACAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTACCACCATTGCTTATGTATTTTTCATTTCGATTTCTTTAACTACAT  700

seq1  GAGGTTGAGTGCATTTTCATAAGACTTTTTGGCACACATTTTCTGTAACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTTGAGTGCATTTTCATAAGACTTTTTGGCACACATTTTCTGTAACA  750

seq1  TCCAGTAATACTATTAATATTTGTTTTGTTTTCTTGAATGACTAAGTATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTAATACTATTAATATTTGTTTTGTTTTCTTGAATGACTAAGTATT  800

seq1  GCTCTGAAATTTTAATGTGCTACAGATATTTCATATGTTTCATTTGAATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGAAATTTTAATGTGCTACAGATATTTCATATGTTTCATTTGAATT  850

seq1  TGTTGAAACTTTTATTCAAAAGCAATATTCCACACATTCATTCCATGGAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGAAACTTTTATTCAAAAGCAATATTCCACACATTCATTCCATGGAC  900

seq1  CGGCCACCAGTCAGCCTCTCTCAATCCGTGGGGAATCAGGGATTCCAGCA  950
      ||||||||||||||||||||||||||||||||||||||||   |||||||
seq2  CGGCCACCAGTCAGCCTCTCTCAATCCGTGGGGAATCAGG--ATCCAGCA  948

seq1  GGTGTGCGTGGATTCGGCAAGAATTGACAGACAGACAAGACACAAGGGAG  1000
       ||||||||||| ||||||||||||||||||||||| |||||||  ||||
seq2  -GTGTGCGTGGA-TCGGCAAGAATTGACAGACAGAC-AGACACA--GGAG  993

seq1  TGCGGATCTGAATGTATTTTGTCCCAAAGT-GAGCATAAG-TCTTATAAA  1048
      |||||||||||||||||||||||||||||| | ||||||| |||||||||
seq2  TGCGGATCTGAATGTATTTTGTCCCAAAGTGGGGCATAAGTTCTTATAAA  1043

seq1  TGACTTTTAAACAGAGCCAACTGCGATAAAATTCAATATTAACAACTGGG  1098
      |||||||  ||||||  | |||||||||||||||||||||||| ||||||
seq2  TGACTTT--AACAGAAGC-ACTGCGATAAAATTCAATATTAAC-ACTGGG  1089

seq1  ATCA-AAAGCAGCCCCACCTAAGGTCAGTTTAATCTTAGAAGTCAGG  1144
      |||| ||||||||||||| ||||||||| ||| |||  |||||||||
seq2  ATCATAAAGCAGCCCCACTTAAGGTCAG-TTATTCTATGAAGTCAGG  1135

seq1: chr14_113266346_113267271
seq2: B6Ng01-019L12.g_67_987 (reverse)

seq1  TGTGTATGACTCTTTCCCTTTTCTCTTCTTTTCTTGTTTATTTTTTTCCT  50
      |||||||||||||||||||||||||||||||   |||||| |||||||||
seq2  TGTGTATGACTCTTTCCCTTTTCTCTTCTTT--CTGTTTA-TTTTTTCCT  47

seq1  GGCCCTCCAAGGAACATTTTGCTAGCCCCAGTCTATTACAAACTCTATGC  100
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GGCCCTCCAAGGAACA-TTTGCTAGCCCCAGTCTATTACAAACTCTATGC  96

seq1  CCTGTCACAGTTTACCCTGGATGTTAAAGCTGTTTTTTTACACTATTTGC  150
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CCTGTCACAGTTTACCCTGGATGTTAAAGCTG-TTTTTTACACTATTTGC  145

seq1  ATATGGCATTTTTTAATTAGAGATAGAATAAGTATAAAATATATAGTGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGCATTTTTTAATTAGAGATAGAATAAGTATAAAATATATAGTGAA  195

seq1  TGTAATTATATGTTGAAATTTATGTTGAAATTTAAAAAGCAACTCTGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATTATATGTTGAAATTTATGTTGAAATTTAAAAAGCAACTCTGGAA  245

seq1  CCAGTATTTACTAGACCTAAGTGAAGTAACATTTAAAAATTGATATCTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTATTTACTAGACCTAAGTGAAGTAACATTTAAAAATTGATATCTGC  295

seq1  CTAGGAGTCGTAGAGCTGGGTCTTAAGATACAAATATTCCCAATTTTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGAGTCGTAGAGCTGGGTCTTAAGATACAAATATTCCCAATTTTCTG  345

seq1  AGAAGCCAACAAATTATTTTGCAGAGTGGTTCCCCGAGTTTTCACTCCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCCAACAAATTATTTTGCAGAGTGGTTCCCCGAGTTTTCACTCCCA  395

seq1  CCCGCAGTATAGGAGTGTTCCCCTTGCAGCACACACTCTCCAGGGTGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGCAGTATAGGAGTGTTCCCCTTGCAGCACACACTCTCCAGGGTGTGT  445

seq1  TTTCCCATGAGCGTTTGATCTTAGCCATTCTGATTGGTGAAAGGTGAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCATGAGCGTTTGATCTTAGCCATTCTGATTGGTGAAAGGTGAAAC  495

seq1  ATGCACAAATTGAGTGCAAAGGTGTATGGTGAACATATACACTGCCTCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACAAATTGAGTGCAAAGGTGTATGGTGAACATATACACTGCCTCAG  545

seq1  TCAGAGTTTCTATTCCTTCACAACATCATGACCAAGAAGCAAGTTAGAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGTTTCTATTCCTTCACAACATCATGACCAAGAAGCAAGTTAGAGA  595

seq1  GGAAAGGGTTTATTAAGCTTACATTTCCACACTGTTGTTCATCACCAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGGGTTTATTAAGCTTACATTTCCACACTGTTGTTCATCACCAAAG  645

seq1  GAAATCAGGACTGGAACTCAACCAGGTCAGGAAGCAGGAGCTGATACAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCAGGACTGGAACTCAACCAGGTCAGGAAGCAGGAGCTGATACAGA  695

seq1  GGCTATGGAGGGATGTTCTTTACTGGCTTGCCTCCACTGGCTTGCTCAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTATGGAGGGATGTTCTTTACTGGCTTGCCTCCACTGGCTTGCTCAGC  745

seq1  TTGCTCTCATATAGAACCCAGGACTACTAGTCCAGGATGATTTGTTTTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCTCATATAGAACCCAGGACTACTAGTCCAGGATGATTTGTTTTCA  795

seq1  AACACACTTAGCTGTAAACGCTTTTACTCTTGCACCTTATGATTAAGATC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACACTTAGCTGTAAACGCTTTTACTCTTGCACCTTATGATTAAGATC  845

seq1  CATGACAGTTTAATAATTTAACAATTATTAAACAATGGGGAAGTGAAAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGACAGTTTAATAATTTAACAATTATTAAACAATGGGGAAGTGAAAAT  895

seq1  TGCATGTGGACCTGTGGAAAGAATTC  926
      ||||||||||||||||||||||||||
seq2  TGCATGTGGACCTGTGGAAAGAATTC  921