BAC Information

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BAC

Clone NameB6Ng01-019P08
Chromosome14 (Build37)
Map Location 17,190,959 - 17,266,033
singlet/doubletdoublet
Overlap geneTop2b, Rarb
Upstream geneLrrc3b, LOC667205, 1700062C10Rik, LOC667209, EG435389, Oxsm, Ngly1
Downstream geneTpi-rs9
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-019P08.bB6Ng01-019P08.g
ACCDH852893DH852894
length444697
definitionDH852893|Mus musculus domesticus DNA, BAC clone: B6Ng01-019P08, 5' end.DH852894|Mus musculus domesticus DNA, BAC clone: B6Ng01-019P08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(17,265,584 - 17,266,033)(17,190,959 - 17,191,655)
sequence
ttgcctggctgagagatataaatactcttgcctcatgattctcagtctat
gtggcaactcaggcaattacagaaatgcctagaggcatctcatagctgag
tgcagaggacttttctatcgagatgactcagccagccacgctattacata
tcatgttccctcccattagcagattctacacctcaggatcttggcaagcc
aagacacaaaagtgcttaaatgcacaatgaacttgcttgacaagaaacct
cagttcttgttttttagtttttttgtgggttggttttgtttttctttttt
tattcatttggtagtttggtttgagggagccgaggggaacattctaagtt
catttccaccacaggattaagagaagcaaaaagacactagtacttgaatg
gatgtaattgaatgaagtggggagagagagagaggagagggaga
gaattcaggagagcagttaagagccctggatcattattgatttatatcaa
ggaaaattgaatgaagatgtcccttctgtctatagaagtaattagaacta
ggatcagaacagcttactgggctcaatcaagccaaattccttgaaaacaa
aactaagtatcctatattcattacaggtaggaactaaagatgtttagtga
tctatctgaagacccagcaatacaactatactccaccataccacagggac
atgtattccactatgttcatagtggccttatttgtgatagccagaagctg
gaaacaacccagaagtcccacgacagaataatggacacagaaaatgtggt
tcattacacagtggaatacaatgtaaatagtattcagctattaagaatga
ggacatcctgagttttgcaggcaaatggatggaactaagaaatatcatcc
tgagtgagataactcagacccaaaagggcaagtatggtatgtactcactg
ataagtggatattagccccccccccccaaaaaaagtgcagaatacccaat
atacagtctacagaactcaaaaaggtcaacaagctgaaaagcccaagtga
agacacctcagtttgtcccacttgggagggagaagaaagcaaccacaatg
gggggggaggaacggagggacctgggagggaaaggggatgggtgtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_17265584_17266033
seq2: B6Ng01-019P08.b_46_495 (reverse)

seq1  TCTCCCTCTCCTCTCTCTCTCTCCCCACTTCATTCAATTACATCCATTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCTCTCCTCTCTCTCTCTCCCCACTTCATTCAATTACATCCATTCA  50

seq1  AGTACTAGTGTCTTTTTGCTTCTCTTAATCCTGTGGTGGAAATGAACTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACTAGTGTCTTTTTGCTTCTCTTAATCCTGTGGTGGAAATGAACTTA  100

seq1  GAATGTTCCCCTCGGCTCCCTCAAACCAAACTACCAAATGAATAAAAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTTCCCCTCGGCTCCCTCAAACCAAACTACCAAATGAATAAAAAAA  150

seq1  GAAAAACAAAACCAACCCACAAAAAAACTAAAAAACAAGAACTGAGGTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAACAAAACCAACCCACAAAAAAACTAAAAAACAAGAACTGAGGTTT  200

seq1  CTTGTCAAGCAAGTTCATTGTGCATTTAAGCACTTTTGTGTCTTGGCTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTCAAGCAAGTTCATTGTGCATTTAAGCACTTTTGTGTCTTGGCTTG  250

seq1  CCAAGATCCTGAGGTGTAGAATCTGCTAATGGGAGGGAACATGATATGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGATCCTGAGGTGTAGAATCTGCTAATGGGAGGGAACATGATATGTA  300

seq1  ATAGCGTGGCTGGCTGAGTCATCTCGATAGAAAAGTCCTCTGCACTCAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCGTGGCTGGCTGAGTCATCTCGATAGAAAAGTCCTCTGCACTCAGC  350

seq1  TATGAGATGCCTCTAGGCATTTCTGTAATTGCCTGAGTTGCCACATAGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGATGCCTCTAGGCATTTCTGTAATTGCCTGAGTTGCCACATAGAC  400

seq1  TGAGAATCATGAGGCAAGAGTATTTATATCTCTCAGCCAGGCAAGAATTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAATCATGAGGCAAGAGTATTTATATCTCTCAGCCAGGCAAGAATTC  450

seq1: chr14_17190959_17191655
seq2: B6Ng01-019P08.g_68_764

seq1  GAATTCAGGAGAGCAGTTAAGAGCCCTGGATCATTATTGATTTATATCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGAGAGCAGTTAAGAGCCCTGGATCATTATTGATTTATATCAA  50

seq1  GGAAAATTGAATGAAGATGTCCCTTCTGTCTATAGAAGTAATTAGAACTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAATTGAATGAAGATGTCCCTTCTGTCTATAGAAGTAATTAGAACTA  100

seq1  GGATCAGAACAGCTTACTGGGCTCAATCAAGCCAAATTCCTTGAAAACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCAGAACAGCTTACTGGGCTCAATCAAGCCAAATTCCTTGAAAACAA  150

seq1  AACTAAGTATCCTATATTCATTACAGGTAGGAACTAAAGATGTTTAGTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAAGTATCCTATATTCATTACAGGTAGGAACTAAAGATGTTTAGTGA  200

seq1  TCTATCTGAAGACCCAGCAATACAACTATACTCCACCATACCACAGGGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCTGAAGACCCAGCAATACAACTATACTCCACCATACCACAGGGAC  250

seq1  ATGTATTCCACTATGTTCATAGTGGCCTTATTTGTGATAGCCAGAAGCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATTCCACTATGTTCATAGTGGCCTTATTTGTGATAGCCAGAAGCTG  300

seq1  GAAACAACCCAGAAGTCCCACGACAGAATAATGGACACAGAAAATGTGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAACCCAGAAGTCCCACGACAGAATAATGGACACAGAAAATGTGGT  350

seq1  TCATTACACAGTGGAATACAATGTAAATAGTATTCAGCTATTAAGAATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTACACAGTGGAATACAATGTAAATAGTATTCAGCTATTAAGAATGA  400

seq1  GGACATCCTGAGTTTTGCAGGCAAATGGATGGAACTAAGAAATATCATCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATCCTGAGTTTTGCAGGCAAATGGATGGAACTAAGAAATATCATCC  450

seq1  TGAGTGAGATAACTCAGACCCAAAAGGGCAAGTATGGTATGTACTCACTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGAGATAACTCAGACCCAAAAGGGCAAGTATGGTATGTACTCACTG  500

seq1  ATAAGTGGATATTAGCCCCCCCCCCCCAAAAAAAGTGCAGAATACCCAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTGGATATTAGCCCCCCCCCCCCAAAAAAAGTGCAGAATACCCAAT  550

seq1  ATACAGTCTACAGAACTCAAAAAGGTCAACAAGCTGAAAAGCCCAAGTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGTCTACAGAACTCAAAAAGGTCAACAAGCTGAAAAGCCCAAGTGA  600

seq1  AGACACCTCAGTTTGTCCCACTTGGGAGGGAGAAGAAAGCAACCACAATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACCTCAGTTTGTCCCACTTGGGAGGGAGAAGAAAGCAACCACAATG  650

seq1  GGGGGGGAGGAACGGAGGGACCTGGGAGGGAAAGGGGATGGGTGTGG  697
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGGGAGGAACGGAGGGACCTGGGAGGGAAAGGGGATGGGTGTGG  697