BAC Information

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BAC

Clone NameB6Ng01-020G20
Chromosome14 (Build37)
Map Location 15,239,616 - 15,394,768
singlet/doubletdoublet
Overlap geneOlfr721-ps1, LOC667152
Upstream geneSynpr, A430083B19Rik, EG382844, LOC100042045, Gm281, Thoc7, Atxn7, Psmd6, Olfr720, LOC667125, LOC100042543, Olfr31, Il3ra, LOC627139
Downstream geneLOC100042147, Slc4a7, Nek10, Lrrc3b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-020G20.bB6Ng01-020G20.g
ACCDH853228DH853229
length1,093989
definitionDH853228|Mus musculus domesticus DNA, BAC clone: B6Ng01-020G20, 5' end.DH853229|Mus musculus domesticus DNA, BAC clone: B6Ng01-020G20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(15,239,616 - 15,240,719)(15,393,782 - 15,394,768)
sequence
gaattccaaggtgaacattcttttcttttcctatgtctcttcgaacatga
ctaacacaaaaaccaataatcatttgacatatgaattttctgcctctaca
gctgattaagctgccatgttctgtggaaatggagactatttaccagaact
ccactgacttcatcctcctgggcctcatcacccacccaaaatttcctgga
ctgatctttgctgtggttttctccatctttgtggtggctgtaacagccaa
cttggtcattattatgctcattcatgtggactctcaccttcacacaccca
tgtactttttactcagccagttgtccatcatggatactgtctatatctgt
atcacggttcccaagatgcttcaagatctcctgtccaaagaaaagaccat
ttcctttctgggatgtgcattgcaaatatttttctacctgacattgattg
ggggagagtttctcctgctgggcctcatggcttatgacaggttcgtggct
gtgtgcaaccctctacggtaccaaataatcatgaatcccagggtttgttt
gcttatggtgctgggctcctgggctggtgggtctttggatggattcatgc
tgacacctgttactatgagctttccttactgtggttctcttgagatcaac
cactttttctgtgagatcccagctgtattgaagctatcctgcagagacac
atcactctatgaaaccttgatgtatgcatgctgtgtgctgatgctactaa
tcccaatatccttcatctcagtctcctatacacggatcctcatcactgtc
taccacatgagctccgctgagggccgtcggaaagccttcaccacgtgttc
ctcccacattatagtagtgagcattttttatggggcagctttctatacca
atgtactgccccattcttaccacacacctgagaaagatagttgtctcagc
ttttataccattctcactctatgttgaccactcatttacagttgaggaaa
ggagatgtggctgtggctctaagaaagtctaagaaattgcctccctctca
gagattacggaggtggacacataccttggaatactagaggaca
gaattcacatacatgcattcaggcatatgtgtacccaaaaataaaataag
tattgtttttaaaattaaattacccgttaatcctgcttttactagacaaa
aattccaagaattgttgtaaaaaatgttttcaaagaaaagtcccaatggt
atactcctgtaatccaggccatgtgcatggttgaggcaggggaatcataa
gtttgagtccagctcaggaggcttagtgagaacctgttttaaagtcaaac
taaaccaactatgagtatagtccaaagtgagtgccttttctcacctgaga
gaggctaggaaattaaaatagaagttctaagctaataaaataagacacaa
gactgaggatgccctcttactcctttgagtacttgtccaacacctagaat
gatgggctagcaccttcctagactgggtgtggtaatggctgcctagcatt
ctagatagagaaacaaggagatcagaaatttaagtttatccttggctggg
cagtgagtccaaggccaccgtgggaaataagagaccagacctttaaaaaa
agtagtaataaactagtatatgacctgtaaaatttctaaatctaggcact
aagggctcagtgtctatgatgcatggaggcagctggaccttaggtaccct
tctggaaaagcactctgctgtagtttttccagagaaaaagataactgagg
ctaatcaaattttctttttaaaaaattaactaatcaatttgaatgttatg
tttattggtgttttgcctgaatgtgtgtctatgtatcatatgcatgccta
gtgtctgcagaggccagaagaggacatcaaggttctctgcaacttggagt
tggatggttgtgaactgaaactggatgatggaaactgccagataggggct
gggagtttacccaggatcttctggaagagtagctagtgctcttaccactt
gagagatctctccagtccataatggaattttctgatggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_15239616_15240719
seq2: B6Ng01-020G20.b_43_1135

seq1  GAATTCCAAGGTGAACATTCTTTTCTTTTCCTATGTCTCTTCGAACATGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGGTGAACATTCTTTTCTTTTCCTATGTCTCTTCGAACATGA  50

seq1  CTAACACAAAAACCAATAATCATTTGACATATGAATTTTCTGCCTCTACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACACAAAAACCAATAATCATTTGACATATGAATTTTCTGCCTCTACA  100

seq1  GCTGATTAAGCTGCCATGTTCTGTGGAAATGGAGACTATTTACCAGAACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGATTAAGCTGCCATGTTCTGTGGAAATGGAGACTATTTACCAGAACT  150

seq1  CCACTGACTTCATCCTCCTGGGCCTCATCACCCACCCAAAATTTCCTGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGACTTCATCCTCCTGGGCCTCATCACCCACCCAAAATTTCCTGGA  200

seq1  CTGATCTTTGCTGTGGTTTTCTCCATCTTTGTGGTGGCTGTAACAGCCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATCTTTGCTGTGGTTTTCTCCATCTTTGTGGTGGCTGTAACAGCCAA  250

seq1  CTTGGTCATTATTATGCTCATTCATGTGGACTCTCACCTTCACACACCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTCATTATTATGCTCATTCATGTGGACTCTCACCTTCACACACCCA  300

seq1  TGTACTTTTTACTCAGCCAGTTGTCCATCATGGATACTGTCTATATCTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTTTTTACTCAGCCAGTTGTCCATCATGGATACTGTCTATATCTGT  350

seq1  ATCACGGTTCCCAAGATGCTTCAAGATCTCCTGTCCAAAGAAAAGACCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACGGTTCCCAAGATGCTTCAAGATCTCCTGTCCAAAGAAAAGACCAT  400

seq1  TTCCTTTCTGGGATGTGCATTGCAAATATTTTTCTACCTGACATTGATTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTCTGGGATGTGCATTGCAAATATTTTTCTACCTGACATTGATTG  450

seq1  GGGGAGAGTTTCTCCTGCTGGGCCTCATGGCTTATGACAGGTTCGTGGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGAGTTTCTCCTGCTGGGCCTCATGGCTTATGACAGGTTCGTGGCT  500

seq1  GTGTGCAACCCTCTACGGTACCAAATAATCATGAATCCCAGGGTTTGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCAACCCTCTACGGTACCAAATAATCATGAATCCCAGGGTTTGTTT  550

seq1  GCTTATGGTGCTGGGCTCCTGGGCTGGTGGGTCTTTGGATGGATTCATGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTATGGTGCTGGGCTCCTGGGCTGGTGGGTCTTTGGATGGATTCATGC  600

seq1  TGACACCTGTTACTATGAGCTTTCCTTACTGTGGTTCTCTTGAGATCAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACACCTGTTACTATGAGCTTTCCTTACTGTGGTTCTCTTGAGATCAAC  650

seq1  CACTTTTTCTGTGAGATCCCAGCTGTATTGAAGCTATCCTGCAGAGACAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTTTCTGTGAGATCCCAGCTGTATTGAAGCTATCCTGCAGAGACAC  700

seq1  ATCACTCTATGAAACCTTGATGTATGCATGCTGTGTGCTGATGCTACTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTCTATGAAACCTTGATGTATGCATGCTGTGTGCTGATGCTACTAA  750

seq1  TCCCAATATCCTTCATCTCAGTCTCCTATACACGGATCCTCATCACTGTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAATATCCTTCATCTCAGTCTCCTATACACGGATCCTCATCACTGTC  800

seq1  TACCACATGAGCTCCGCTGAGGGCCGTCGGAAAGCCTTCACCACGTGTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCACATGAGCTCCGCTGAGGGCCGTCGGAAAGCCTTCACCACGTGTTC  850

seq1  CTCCCACATTATAGTAGTGAGCATTTTTTATGGGGCAGCTTTCTATACCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCACATTATAGTAGTGAGCATTTTTTATGGGGCAGCTTTCTATACCA  900

seq1  ATGTACTGCCCCATTCTTACCACACACCTGAGAAAGATAAGGTTGTCTCA  950
      |||||||||||||||||||||||||||||||||||||||  |||||||||
seq2  ATGTACTGCCCCATTCTTACCACACACCTGAGAAAGATA--GTTGTCTCA  948

seq1  GCCTTTTATACCATTCTCACTCCTATGTTGAACCCACTCATTTACAGTTT  1000
      | ||||||||||||||||||| |||||||||  |||||||||||||| ||
seq2  G-CTTTTATACCATTCTCACT-CTATGTTGA--CCACTCATTTACAG-TT  993

seq1  GAGGAATAGAGATGTGGCTGTGGCTCTAAGAAAAGTCCTAAGGAAATATG  1050
      ||||||  |||||||||||||||||||||| ||||| |||| |||||   
seq2  GAGGAAAGGAGATGTGGCTGTGGCTCTAAG-AAAGT-CTAA-GAAATTGC  1040

seq1  CTTCCTCTCAGAGATTAC-GAGTGAGACACATACCTGAGAAATACTAGCA  1099
      || ||||||||||||||| |||   |||||||||||  | |||||||| |
seq2  CTCCCTCTCAGAGATTACGGAGGTGGACACATACCT-TGGAATACTAG-A  1088

seq1  GGACA  1104
      |||||
seq2  GGACA  1093

seq1: chr14_15393782_15394768
seq2: B6Ng01-020G20.g_67_1055 (reverse)

seq1  ACCATCAGAAAATTCCATTATGGGCTGGAGAGATCTCTC-AGTGGTTAAG  49
      ||||||||||||||||||||||| ||||||||||||||| ||||| ||||
seq2  ACCATCAGAAAATTCCATTATGGACTGGAGAGATCTCTCAAGTGG-TAAG  49

seq1  AGCACTAGCTTCTCTTCCAGAAGATCCTGGTTAAACTCCCAGCCCCTATC  99
      |||||||||| ||||||||||||||||||| |||||||||||||||||||
seq2  AGCACTAGCTACTCTTCCAGAAGATCCTGGGTAAACTCCCAGCCCCTATC  99

seq1  TGGCAGTTCTCCATCATCCAGTTTCAGTTCACAACCATCCAACTCC-AGT  148
      |||||||| ||||||||||||||||||||||||||||||||||||| |||
seq2  TGGCAGTT-TCCATCATCCAGTTTCAGTTCACAACCATCCAACTCCAAGT  148

seq1  TGCAGAGAACC-TGATGTCCTCTTCTGGCCTCTGCAGACACTAGGCATGC  197
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAGAACCTTGATGTCCTCTTCTGGCCTCTGCAGACACTAGGCATGC  198

seq1  ATATGATACATAGACACACATTCAGGCAAAACACCAATAAACATAACATT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGATACATAGACACACATTCAGGCAAAACACCAATAAACATAACATT  248

seq1  CAAATTGATTAGTTAATTTTTTAAAAAGAAAATTTGATTAGCCTCAGTTA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTGATTAGTTAATTTTTTAAAAAGAAAATTTGATTAGCCTCAGTTA  298

seq1  TCTTTTTCTCTGG-AAAACTACAGCAGAGTGCTTTTCCAGAAGGGTACCT  346
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTCTCTGGAAAAACTACAGCAGAGTGCTTTTCCAGAAGGGTACCT  348

seq1  AAGGTCCAGCTGCCTCCATGCATCATAGACACTGAGCCCTTAGTGCCTAG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCCAGCTGCCTCCATGCATCATAGACACTGAGCCCTTAGTGCCTAG  398

seq1  ATTTAGAAATTTTACAGGTCATATACTAGTTTATTACTACTTTTTTTAAA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGAAATTTTACAGGTCATATACTAGTTTATTACTACTTTTTTTAAA  448

seq1  GGTCTGGTCTCTTATTTCCCACGGTGGCCTTGGACTCACTGCCCAGCCAA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTGGTCTCTTATTTCCCACGGTGGCCTTGGACTCACTGCCCAGCCAA  498

seq1  GGATAAACTTAAATTTCTGATCTCCTTGTTTCTCTATCTAGAATGCTAGG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAAACTTAAATTTCTGATCTCCTTGTTTCTCTATCTAGAATGCTAGG  548

seq1  CAGCCATTACCACACCCAGTCTAGGAAGGTGCTAGCCCATCATTCTAGGT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCATTACCACACCCAGTCTAGGAAGGTGCTAGCCCATCATTCTAGGT  598

seq1  GTTGGACAAGTACTCAAAGGAGTAAGAGGGCATCCTCAGTCTTGTGTCTT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGACAAGTACTCAAAGGAGTAAGAGGGCATCCTCAGTCTTGTGTCTT  648

seq1  ATTTTATTAGCTTAGAACTTCTATTTTAATTTCCTAGCCTCTCTCAGGTG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATTAGCTTAGAACTTCTATTTTAATTTCCTAGCCTCTCTCAGGTG  698

seq1  AGAAAAGGCACTCACTTTGGACTATACTCATAGTTGGTTTAGTTTGACTT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGGCACTCACTTTGGACTATACTCATAGTTGGTTTAGTTTGACTT  748

seq1  TAAAACAGGTTCTCACTAAGCCTCCTGAGCTGGACTCAAACTTATGATTC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACAGGTTCTCACTAAGCCTCCTGAGCTGGACTCAAACTTATGATTC  798

seq1  CCCTGCCTCAACCATGCACATGGCCTGGATTACAGGAGTATACCATTGGG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCCTCAACCATGCACATGGCCTGGATTACAGGAGTATACCATTGGG  848

seq1  ACTTTTCTTTGAAAACATTTTTTACAACAATTCTTGGAATTTTTGTCTAG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTCTTTGAAAACATTTTTTACAACAATTCTTGGAATTTTTGTCTAG  898

seq1  TAAAAGCAGGATTAACGGGTAATTTAATTTTAAAAACAATACTTATTTTA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGCAGGATTAACGGGTAATTTAATTTTAAAAACAATACTTATTTTA  948

seq1  TTTTTGGGTACACATATGCCTGAATGCATGTATGTGAATTC  987
      |||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGGGTACACATATGCCTGAATGCATGTATGTGAATTC  989