BAC Information

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BAC

Clone NameB6Ng01-020L10
Chromosome14 (Build37)
Map Location 32,556,887 - 32,558,018
singlet/doubletsinglet
Overlap geneAnkrd28
Upstream geneSfmbt1, Tmem110, Mustn1, Itih4, Itih3, Itih1, Nek4, Spcs1, Glt8d1, Gnl3, Pbrm1, EG432834, Nt5dc2, Stab1, Nisch, Tnnc1, Sema3g, Phf7, Bap1, Dnahc1, Capn7, Sh3bp5, Mettl6, Eaf1, Colq, Hacl1, Btd
Downstream geneGalntl2, Dph3, Oxnad1, Msmb, Ncoa4, Timm23, Parg, LOC665601, Ogdhl, 1700024G13Rik, Chat, Slc18a3, LOC100040834, EG665618, Ercc6, 9430077A04Rik, Prrxl1, 3425401B19Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-020L10.bB6Ng01-020L10.g
ACCDH853432DH853433
length1,1011,170
definitionDH853432|Mus musculus domesticus DNA, BAC clone: B6Ng01-020L10, 5' end.DH853433|Mus musculus domesticus DNA, BAC clone: B6Ng01-020L10, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactataaatggtgattggaggcaagcatacctcggtcatctatt
tcagagggccactaaagccattatgctaattggttgaaagagagctacaa
gaactgttagcaaactgaaacttgaagccatcttgtacttctcggggtcc
cattcaacaatatgtttgggtgttttgcaacttcttctaattcccacatt
ttccatgtattccttgttttcagtaaagtgtttctcatagtcctgtcatg
tcttgtctaactagaatcacaagctttttgacagcttttgcaattaagac
cttatagtcttcctctctttgttctctcctttctccttatctactgcttt
gaaaaattggtaagcttaactcacatgttcctacaataagagtaaataac
attagagcagggagagtggcacacacctattatgcaagcacttgcaaatt
gagacagaaggattccaaatttgaggccaacttgggctatacaatgagac
tgtcccccaaaccaaaagagtaaatctattacaagtgggagtaaaggaca
tgtttttaaaatgatacataaaagctagatggatttttatttaggcatca
aatatataccaagagattagtatcccttcctagccaaaaagaatggtagt
actatacagtgcttatatagtgtttatagtacacacacacatttttattt
atatatacgtataataaatacatcttttgttgtcttcctctcttgcattt
gccagtatcccattattctatagtcacttaaagtaaagttagacttactg
gctcagaaaactgacaataacacagctacctagtcaacatgtatctgatc
tgctagcacccagagaactggaagaaacagagctacaggaactaaaaaag
aactttgggtaaatcactcatctttggaatagtttaactctttacatagt
ttgtctattatactggctatttatgtcacttgacacatcagagtcatcta
gagagacctcatgagaactgctcataaactggctaatatacaatcttagt
catttttattgatgattgatgacagtccagccattgtgagtgatgtcatc
c
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagattgtctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagaaagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggacccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtgggatgctcacagtcagctaatggatggatcacagggcttct
cattaaggagctagagaaagtacccaaggagctaagggatctgcaaccct
ataggtggatcaacattatgactacagtacccgggagctctgactctagc
tgcatatggtatcaaaagatggctagtcggccatcactggaagagaggca
ttggaccccaatgtatagcccctaaccgggaacgccagggccaaggggag
tgggcgggtaagagggattg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_32556887_32558018
seq2: B6Ng01-020L10.b_41_1141

seq1  GAATTCACTATAAATGGTGATTGGAGGCAAGCATACCTCGGTCATCTATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTATAAATGGTGATTGGAGGCAAGCATACCTCGGTCATCTATT  50

seq1  TCAGAGGGCCACTAAAGCCATTATGCTAATTGGTTGAAAGAGAGCTACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGGGCCACTAAAGCCATTATGCTAATTGGTTGAAAGAGAGCTACAA  100

seq1  GAACTGTTAGCAAACTGAAACTTGAAGCCATCTTGTACTTCTCGGGGTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGTTAGCAAACTGAAACTTGAAGCCATCTTGTACTTCTCGGGGTCC  150

seq1  CATTCAACAATATGTTTGGGTGTTTTGCAACTTCTTCTAATTCCCACATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCAACAATATGTTTGGGTGTTTTGCAACTTCTTCTAATTCCCACATT  200

seq1  TTCCATGTATTCCTTGTTTTCAGTAAAGTGTTTCTCATAGTCCTGTCATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATGTATTCCTTGTTTTCAGTAAAGTGTTTCTCATAGTCCTGTCATG  250

seq1  TCTTGTCTAACTAGAATCACAAGCTTTTTGACAGCTTTTGCAATTAAGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTCTAACTAGAATCACAAGCTTTTTGACAGCTTTTGCAATTAAGAC  300

seq1  CTTATAGTCTTCCTCTCTTTGTTCTCTCCTTTCTCCTTATCTACTGCTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATAGTCTTCCTCTCTTTGTTCTCTCCTTTCTCCTTATCTACTGCTTT  350

seq1  GAAAAATTGGTAAGCTTAACTCACATGTTCCTACAATAAGAGTAAATAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAATTGGTAAGCTTAACTCACATGTTCCTACAATAAGAGTAAATAAC  400

seq1  ATTAGAGCAGGGAGAGTGGCACACACCTATTATGCAAGCACTTGCAAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGAGCAGGGAGAGTGGCACACACCTATTATGCAAGCACTTGCAAATT  450

seq1  GAGACAGAAGGATTCCAAATTTGAGGCCAACTTGGGCTATACAATGAGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAGAAGGATTCCAAATTTGAGGCCAACTTGGGCTATACAATGAGAC  500

seq1  TGTCCCCCAAACCAAAAGAGTAAATCTATTACAAGTGGGAGTAAAGGACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCCCAAACCAAAAGAGTAAATCTATTACAAGTGGGAGTAAAGGACA  550

seq1  TGTTTTTAAAATGATACATAAAAGCTAGATGGATTTTTATTTAGGCATCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTAAAATGATACATAAAAGCTAGATGGATTTTTATTTAGGCATCA  600

seq1  AATATATACCAAGAGATTAGTATCCCTTCCTAGCCAAAAAGAATGGTAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATATACCAAGAGATTAGTATCCCTTCCTAGCCAAAAAGAATGGTAGT  650

seq1  ACTATACAGTGCTTATATAGTGTTTATAGTACACACACACATTTTTATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATACAGTGCTTATATAGTGTTTATAGTACACACACACATTTTTATTT  700

seq1  ATATATACGTATAATAAATACATCTTTTGTTGTCTTCCTCTCTTGCATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATACGTATAATAAATACATCTTTTGTTGTCTTCCTCTCTTGCATTT  750

seq1  GCCAGTATCCCATTATTCTATAGTCACTTAAAGTAAAGTTAGACTTACTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGTATCCCATTATTCTATAGTCACTTAAAGTAAAGTTAGACTTACTG  800

seq1  GCTCAGAAAACTGACAATAACACAGCTACCTAGTCAACATGTATCTGATC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGAAAACTGACAATAACACAGCTACCTAGTCAACATGTATCTGATC  850

seq1  TGCTAGCACCCAGAGAACTGGAAGAAACAGAGCTACAGGAACTAAAAAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TGCTAGCACCCAGAGAACTGGAAGAAACAGAGCTACAGGAACTAAAAAA-  899

seq1  GAAACTTTGGGTAAATCACTCATCTTTGGAATAGGTTTTAACTCTTTACA  950
        ||||||||||||||||||||||||||||||||  ||||||||||||||
seq2  -GAACTTTGGGTAAATCACTCATCTTTGGAATAG--TTTAACTCTTTACA  946

seq1  TAGTTTGTCTAATTATACTGGCTAATTTTATGTCACCTTGACACAATCAA  1000
      |||||||||| |||||||||||||  ||||||||| |||||||| ||| |
seq2  TAGTTTGTCT-ATTATACTGGCTA--TTTATGTCA-CTTGACAC-ATC-A  990

seq1  GAGTCATCTTAGAGGAAGGAACCTCAATTGAGAAACTGCCTCCATAAAAC  1050
      |||||||| |||||  ||  ||||||  |||| ||||||   ||| ||||
seq2  GAGTCATC-TAGAG--AG--ACCTCA--TGAG-AACTGC--TCAT-AAAC  1029

seq1  TGGGCTATATACAAATCTATAGTTCATTTTTTTTAATTGATGATTGATGA  1100
      |||   |||||| ||||| ||| ||||||||    |||||||||||||||
seq2  TGGCTAATATAC-AATCT-TAG-TCATTTTT----ATTGATGATTGATGA  1072

seq1  CAGGGCCCAGCCCATTGTGAGTGATGTCATCC  1132
      ||  | |||| |||||||||||||||||||||
seq2  CA--GTCCAG-CCATTGTGAGTGATGTCATCC  1101