BAC Information

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BAC

Clone NameB6Ng01-021F14
Chromosome14 (Build37)
Map Location 60,097,167 - 60,211,419
singlet/doubletdoublet
Overlap geneCab39l, Cdadc1
Upstream geneEG668177, EG668182, 1700129C05Rik, EG380907, Rcbtb1, EG628693, Phf11, EG236451, D14Ertd668e, EG628705, Setdb2
Downstream geneTmem46, Atp8a2, LOC668162, LOC628768, Nupl1, Mtmr6, 2600011E07Rik, Ppia-ps14_696.1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-021F14.bB6Ng01-021F14.g
ACCDH853879DH853880
length920988
definitionDH853879|Mus musculus domesticus DNA, BAC clone: B6Ng01-021F14, 5' end.DH853880|Mus musculus domesticus DNA, BAC clone: B6Ng01-021F14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(60,097,167 - 60,098,096)(60,210,414 - 60,211,419)
sequence
gaattcattgctgttttataaaagtacactgttaaaattgaattaaaaat
tctaaaggttcccttgccttctcggctttttgttgaattggtagtgcctg
cgtatatcttcaccacactttctcattataacagggaggtgcatcctccc
tgaggagccaacacattagcagacgaatcagttattattacatcaataag
cagttgctgggaatcttcctttacaattttaggcaagatgattcaggcag
cttaatcatttgacaaaatcccatctaggaattgatttgagacttaaagg
gagagaagttacatcaaatttttcttttgtttatttttagacttttcttt
ttgcccaagaattaattttgcctctgcttaattgctttgcaggcattctt
gtaatgttacacaataggagagggagggagcaaagggagctgtgactgtg
tggtgtgtatctcacacccatgctagagagggagagaacgaatcagcaag
ctggtttgaccagaaacagagctgcctatgacagattaagagacaagcaa
ggcttggaatctgagagcaagcagagtggaaatttactgcagctctctgt
gagtgttcaagtgatcattttctcctaacgttttccggtagtaactgtta
ctcctcagagtcagaaagtcaagacggaattgtgctaagtcttttatcca
ccacacttgcgtaggaggaggcgccctttagtaaatggaagataaaggtt
gcttcagctgaagtgtttttgaacctgagaaaagagctgtcttcagtacc
tcaccatgggtctgcttttgttgcttagacaagctgggagttctatatcc
cttggtgatatcaacaagattatctgattggttgagtgagaaaatgaata
ataaggacagtgaatctaca
gaattcatcatgttaatcatcttcccttttaatctgattttaattagaaa
actgaagaggaaagccgtggtcccttaggagacaatgaagagttgaccag
agtgtctactgaaaaaaaacaggtgaattgttgtgatttaaaaaaaaaaa
aaaaaaaagatgtgcaagtttatgataagaaagcaaagaaaagggataaa
gtcctgtgaagacctccgtaatcaagggagtttcttagatttctccataa
aggccttgtgtactgacaagcctatatgtctttcctgtttgaaaaattca
agtgggagtattgtgtaatgtttctaacgtctaatcctgatttcacacag
atgtgttaagcaatgccctgcggagtctttcacgtgtgtgtatcttggtt
attatgactggagtgcaagcctggttactctttacgtgggtcacttctca
agggttaaggattgagtcaattagtatctccctctgggaccaacagcact
gtctgtcttgctgttcctctccgaagatcagatttccaaatctgtgggtc
caaacaaccttgtggtcccagctgcatcaccccctgtgggcctggagggc
gtggccaccacagacgagcttcttactcttctgagtcctttgtccctgat
ccacgaatttcttgtctgctattgtatatgaaacagggcagtcaacccgg
aaggcaaatcctgacctctgtgattctgcctggggtgtccttgtcacttt
agtttccagagaaggttgttgatcatttatagagaatgacttgcacttgt
atttgaaaaagttattttttgatgtctgtttttaaaatttcctgataatt
ctgggagtgctctcttcactgcctggtgggattttgacaaattttcctga
gactgctagatgctttcaccaagggaaaaattagcgatccctaggtcatt
atgactaagattcaaaggtgatcgtggctacatgttta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_60097167_60098096
seq2: B6Ng01-021F14.b_43_962

seq1  GAATTCATTGCTGTTTTATAAAAGTACACTGTTAAAATTGAATTAAAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGCTGTTTTATAAAAGTACACTGTTAAAATTGAATTAAAAAT  50

seq1  TCTAAAGGTTCCCTTGCCTTCTCGGCTTTTTGTTGAATTGGTAGTGCCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAGGTTCCCTTGCCTTCTCGGCTTTTTGTTGAATTGGTAGTGCCTG  100

seq1  CGTATATCTTCACCACACTTTCTCATTATAACAGGGAGGTGCATCCTCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTATATCTTCACCACACTTTCTCATTATAACAGGGAGGTGCATCCTCCC  150

seq1  TGAGGAGCCAACACATTAGCAGACGAATCAGTTATTATTACATCAATAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAGCCAACACATTAGCAGACGAATCAGTTATTATTACATCAATAAG  200

seq1  CAGTTGCTGGGAATCTTCCTTTACAATTTTAGGCAAGATGATTCAGGCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTGCTGGGAATCTTCCTTTACAATTTTAGGCAAGATGATTCAGGCAG  250

seq1  CTTAATCATTTGACAAAATCCCATCTAGGAATTGATTTGAGACTTAAAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATCATTTGACAAAATCCCATCTAGGAATTGATTTGAGACTTAAAGG  300

seq1  GAGAGAAGTTACATCAAATTTTTCTTTTGTTTATTTTTAGACTTTTCTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAAGTTACATCAAATTTTTCTTTTGTTTATTTTTAGACTTTTCTTT  350

seq1  TTGCCCAAGAATTAATTTTGCCTCTGCTTAATTGCTTTGCAGGCATTCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCCAAGAATTAATTTTGCCTCTGCTTAATTGCTTTGCAGGCATTCTT  400

seq1  GTAATGTTACACAATAGGAGAGGGAGGGAGCAAAGGGAGCTGTGACTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATGTTACACAATAGGAGAGGGAGGGAGCAAAGGGAGCTGTGACTGTG  450

seq1  TGGTGTGTATCTCACACCCATGCTAGAGAGGGAGAGAACGAATCAGCAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTGTATCTCACACCCATGCTAGAGAGGGAGAGAACGAATCAGCAAG  500

seq1  CTGGTTTGACCAGAAACAGAGCTGCCTATGACAGATTAAGAGACAAGCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTTGACCAGAAACAGAGCTGCCTATGACAGATTAAGAGACAAGCAA  550

seq1  GGCTTGGAATCTGAGAGCAAGCAGAGTGGAAATTTACTGCAGCTCTCTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTGGAATCTGAGAGCAAGCAGAGTGGAAATTTACTGCAGCTCTCTGT  600

seq1  GAGTGTTCAAGTGATCATTTTCTCCTAACGTTTTCCGGTAGTAACTGTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTTCAAGTGATCATTTTCTCCTAACGTTTTCCGGTAGTAACTGTTA  650

seq1  CTCCTCAGAGTCAGAAAGTCAAGACGGAATTGTGCTAAGTCTTTTATCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCAGAGTCAGAAAGTCAAGACGGAATTGTGCTAAGTCTTTTATCCA  700

seq1  CCACACTTGCGTAGGAGGAGGCGCCCTTTAGTAAATGGAAGATAAAGGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACTTGCGTAGGAGGAGGCGCCCTTTAGTAAATGGAAGATAAAGGTT  750

seq1  GCTTCAGCTGAAGTG-TTTTGAACCTGAGAAAAGAGCTGTCTTCAGTACC  799
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GCTTCAGCTGAAGTGTTTTTGAACCTGAGAAAAGAGCTGTCTTCAGTACC  800

seq1  TCACCATGGGTCTGCTTTTTGTTGCTTAGACAAGCTGGGAGTTTCTATAT  849
      ||||||||||||||| ||||||||||||||||||||||||| ||||||||
seq2  TCACCATGGGTCTGC-TTTTGTTGCTTAGACAAGCTGGGAG-TTCTATAT  848

seq1  CCCTTGGTGAGTATCAACAAGATTATCTGTATTGGTTTGAGTTGAGAAAA  899
      |||||||||| |||||||||||||||||| ||||| ||||| |||| |||
seq2  CCCTTGGTGA-TATCAACAAGATTATCTG-ATTGG-TTGAG-TGAG-AAA  893

seq1  ATGAATTAATAAGGTACAGTTGAATTCTACA  930
      ||||| |||||||| |||| |||| ||||||
seq2  ATGAA-TAATAAGG-ACAG-TGAA-TCTACA  920

seq1: chr14_60210414_60211419
seq2: B6Ng01-021F14.g_69_1049 (reverse)

seq1  GTAGACCACGATCACCTTTTGTACATGCTTTAGTCAGTATATTGACCTAG  50
      |||| ||||||||||||||    |     ||||||   ||| ||||||||
seq2  GTAG-CCACGATCACCTTTGAATC-----TTAGTC---ATAATGACCTAG  41

seq1  GTGATCCGCTAATTTTTTCCCCTTTGTGTTGAAAGCATCTAAGCAGTCTC  100
      | ||| |||||||||||  ||||   || ||||||||||| |||||||||
seq2  G-GAT-CGCTAATTTTT--CCCT---TGGTGAAAGCATCT-AGCAGTCTC  83

seq1  AGGAAAATTATGTCAAAATCACACCAGGCAGTGAAAGAGACGCACTCCCA  150
      ||||||||| |||||||||| |||||||||||| |||||| |||||||||
seq2  AGGAAAATT-TGTCAAAATCCCACCAGGCAGTG-AAGAGA-GCACTCCCA  130

seq1  GAACTAATCAGGAAACTTATAAAAACAGACATCAAAATAATAACTTTTTC  200
      ||| | ||||||||| || |||||||||||||||||| ||||||||||||
seq2  GAA-TTATCAGGAAA-TTTTAAAAACAGACATCAAAA-AATAACTTTTTC  177

seq1  AAAATACACGTGCAAGTCATTCTCTATATATGATCAACAACCTTCTCTGG  250
       ||||||| ||||||||||||||||||| |||||||||||||||||||||
seq2  -AAATACAAGTGCAAGTCATTCTCTATAAATGATCAACAACCTTCTCTGG  226

seq1  AAACTAAAGGTGACAAGGACACCCCAGGCAGAATCACAGAGGTCAGGATT  300
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AAACTAAA-GTGACAAGGACACCCCAGGCAGAATCACAGAGGTCAGGATT  275

seq1  TGCCTTCCGGGTTGACTGCCCTGTTTCATATACAATAGCAGACAAGAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTCCGGGTTGACTGCCCTGTTTCATATACAATAGCAGACAAGAAAT  325

seq1  TCGTGGATCAGGGACAAAGGACTCAGAAGAGTAAGAAGCTCGTCTGTGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTGGATCAGGGACAAAGGACTCAGAAGAGTAAGAAGCTCGTCTGTGGT  375

seq1  GGCCACGCCCTCCAGGCCCACAGGGGGTGATGCAGCTGGGACCACAAGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCACGCCCTCCAGGCCCACAGGGGGTGATGCAGCTGGGACCACAAGGT  425

seq1  TGTTTGGACCCACAGATTTGGAAATCTGATCTTCGGAGAGGAACAGCAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGGACCCACAGATTTGGAAATCTGATCTTCGGAGAGGAACAGCAAG  475

seq1  ACAGACAGTGCTGTTGGTCCCAGAGGGAGATACTAATTGACTCAATCCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACAGTGCTGTTGGTCCCAGAGGGAGATACTAATTGACTCAATCCTT  525

seq1  AACCCTTGAGAAGTGACCCACGTAAAGAGTAACCAGGCTTGCACTCCAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTTGAGAAGTGACCCACGTAAAGAGTAACCAGGCTTGCACTCCAGT  575

seq1  CATAATAACCAAGATACACACACGTGAAAGACTCCGCAGGGCATTGCTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATAACCAAGATACACACACGTGAAAGACTCCGCAGGGCATTGCTTA  625

seq1  ACACATCTGTGTGAAATCAGGATTAGACGTTAGAAACATTACACAATACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATCTGTGTGAAATCAGGATTAGACGTTAGAAACATTACACAATACT  675

seq1  CCCACTTGAATTTTTCAAACAGGAAAGACATATAGGCTTGTCAGTACACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTTGAATTTTTCAAACAGGAAAGACATATAGGCTTGTCAGTACACA  725

seq1  AGGCCTTTATGGAGAAATCTAAGAAACTCCCTTGATTACGGAGGTCTTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTTTATGGAGAAATCTAAGAAACTCCCTTGATTACGGAGGTCTTCA  775

seq1  CAGGACTTTATCCCTTTTCTTTGCTTTCTTATCATAAACTTGCACATCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACTTTATCCCTTTTCTTTGCTTTCTTATCATAAACTTGCACATCTT  825

seq1  TTTTTTTTTTTTTTTTTAAATCACAACAATTCACCTGTTTTTTTTCAGTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTTTTAAATCACAACAATTCACCTGTTTTTTTTCAGTA  875

seq1  GACACTCTGGTCAACTCTTCATTGTCTCCTAAGGGACCACGGCTTTCCTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTCTGGTCAACTCTTCATTGTCTCCTAAGGGACCACGGCTTTCCTC  925

seq1  TTCAGTTTTCTAATTAAAATCAGATTAAAAGGGAAGATGATTAACATGAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTTTTCTAATTAAAATCAGATTAAAAGGGAAGATGATTAACATGAT  975

seq1  GAATTC  1006
      ||||||
seq2  GAATTC  981