BAC Information

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BAC

Clone NameB6Ng01-021J24
Chromosome14 (Build37)
Map Location 60,581,491 - 60,715,657
singlet/doubletdoublet
Overlap geneAtp8a2, LOC668162
Upstream gene1700129C05Rik, EG380907, Rcbtb1, EG628693, Phf11, EG236451, D14Ertd668e, EG628705, Setdb2, Cab39l, Cdadc1, Tmem46
Downstream geneLOC628768, Nupl1, Mtmr6, 2600011E07Rik, Ppia-ps14_696.1, EG628836, Spata13, C1qtnf9, Mipep, LOC100043586, Tnfrsf19
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-021J24.bB6Ng01-021J24.g
ACCDH854074DH854075
length1,1971,090
definitionDH854074|Mus musculus domesticus DNA, BAC clone: B6Ng01-021J24, 5' end.DH854075|Mus musculus domesticus DNA, BAC clone: B6Ng01-021J24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(60,581,491 - 60,582,661)(60,714,569 - 60,715,657)
sequence
gaattccattatgcataggtaccatatttctttatccacgtgttaatgga
tgtcatattgatgacctatattggccactgtaagtaataatacagtggag
gcagcaaagcagacttttttgacagtgacttcatttccttcacatttgta
ttagttacttttctcagtgctgtgacagtgaatactgccaaaagtacctt
cattaagggcttatcttggatcatcattggaaggcacagttagttcttca
tggtgaggaaagcatggcagtagaagatggagtcggttgatcacacattg
tgtctacagtcaggacacagaggattgtgggttatctctgctccctgtta
ttcagcctgggaccacagcccatagaatggtgctgcactcatttatggtg
agtccttataccccagttaacacaatctagacaatactctcaaagacata
cctcgaagacatgcctaagggtttggctcttggatggctctagatcctgt
taggttgacagtatatataaactactacaagttcactcttttcaacttga
catgcaaacctattgctctaaaccatacctaaatatgtttacaaaacaat
actgcagaagcctgaatgtggcctgactgctgatggcaaatgctcccaat
ataatttcgccatgctttaaccaataccattcattatttatttgatgtat
atggaatgagcattgatatttagtagtataaagacactgaccgttgtcaa
gtatagcaatctgtcaacttattctttctgagtgtgtaggagccatatgt
gtgtgcctgcttggtcacgtgggtgttctcgcctaagcagatgcatgcag
aggccaaaggttggtgctcatgtctatctctactaagctgcacctcagct
ttgcacacaacatctctcactcagcctggagctcgctattcagctacagt
tgctgcacagtgagcatcttcccaccagcactaggactacaagtacggat
agttacacttgacctctgcctgggtgcggagaatctgaactccaggaact
atggtgttaagcatgcactttacctgagctctctatcctcccagcccctg
cttactctgttccataaaataatatttatatcttttgttactcagtataa
tcaaacattttttatttcagctgtaaaatggatcacggttaaagtac
gaattctcattctctgaactgagaatttatgtagcatagatttttttcct
ttaaagtctggttttatctatgagatacatttccagagaagcacatttat
cttcgcttaatttacaagatgagttagcacaggacacagaatgggttttg
agatcagaagtctgtattgcaggtcttactgaatagaagtgtcgtagttt
ggctctctgctactttgatgatgtaggggcaggatccaagatgcccatca
ctgctttagcaccaaagcaacacgagtgggaaagggattattcggctcac
acatcccagtcacagtctatccctgagggaagtcagggcaggaactcaag
tgggaccagaagcaagagccatggaggaaagctgatcgattgtcccctct
ggcttacttagctagcttccctgaatagcccagacccactttcccaagaa
cgggactgcacacaatagattgggtcctcccaccatcaatcattaatcaa
gaaaatggctcatagacatgctcagaggactatctgatggagacaattcc
ccaattaaggttctctcctcccaagtgactctagtttgtgtcaggttgac
aaaaaagctatgccttcaactgtgtatttctccctcccaccacccagcaa
aatgcctcccatgtaggaggtacttgatcactgaatgaatccagcatcca
caatatttcaagtcataaacagcccacggcctattacttttgctgcattc
tctttattcccgtgagaagagaaaagaatccagtaagtgtttgacagaaa
ttaagaaatcccggacgcatcactgtcattcttcccattgttctctgagc
ttcggaactttttgctggagttggatcacatctgtttattggagagacac
agtctgtgcaaactggggtcttgagaagcctctcaagtgtgctgccaagg
caaaaataaccacattctgcatttggcccagcactgccattgtgtctgtc
tgattaggcgaaggtaatcagccctggctcctctctagcaccaaactgcg
gctgtgtacctgtgttccaaagagccataaaaagctttgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_60581491_60582661
seq2: B6Ng01-021J24.b_77_1241

seq1  TATCCACGTGTTAATGGATGTCATATTGATGACCTATATTGGCCACTGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCACGTGTTAATGGATGTCATATTGATGACCTATATTGGCCACTGTA  50

seq1  AGTAATAATACAGTGGAGGCAGCAAAGCAGACTTTTTTGACAGTGACTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATAATACAGTGGAGGCAGCAAAGCAGACTTTTTTGACAGTGACTTC  100

seq1  ATTTCCTTCACATTTGTATTAGTTACTTTTCTCAGTGCTGTGACAGTGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCTTCACATTTGTATTAGTTACTTTTCTCAGTGCTGTGACAGTGAA  150

seq1  TACTGCCAAAAGTACCTTCATTAAGGGCTTATCTTGGATCATCATTGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCCAAAAGTACCTTCATTAAGGGCTTATCTTGGATCATCATTGGAA  200

seq1  GGCACAGTTAGTTCTTCATGGTGAGGAAAGCATGGCAGTAGAAGATGGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACAGTTAGTTCTTCATGGTGAGGAAAGCATGGCAGTAGAAGATGGAG  250

seq1  TCGGTTGATCACACATTGTGTCTACAGTCAGGACACAGAGGATTGTGGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGTTGATCACACATTGTGTCTACAGTCAGGACACAGAGGATTGTGGGT  300

seq1  TATCTCTGCTCCCTGTTATTCAGCCTGGGACCACAGCCCATAGAATGGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCTGCTCCCTGTTATTCAGCCTGGGACCACAGCCCATAGAATGGTG  350

seq1  CTGCACTCATTTATGGTGAGTCCTTATACCCCAGTTAACACAATCTAGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCACTCATTTATGGTGAGTCCTTATACCCCAGTTAACACAATCTAGAC  400

seq1  AATACTCTCAAAGACATACCTCGAAGACATGCCTAAGGGTTTGGCTCTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTCTCAAAGACATACCTCGAAGACATGCCTAAGGGTTTGGCTCTTG  450

seq1  GATGGCTCTAGATCCTGTTAGGTTGACAGTATATATAAACTACTACAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCTCTAGATCCTGTTAGGTTGACAGTATATATAAACTACTACAAGT  500

seq1  TCACTCTTTTCAACTTGACATGCAAACCTATTGCTCTAAACCATACCTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCTTTTCAACTTGACATGCAAACCTATTGCTCTAAACCATACCTAA  550

seq1  ATATGTTTACAAAACAATACTGCAGAAGCCTGAATGTGGCCTGACTGCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTTTACAAAACAATACTGCAGAAGCCTGAATGTGGCCTGACTGCTG  600

seq1  ATGGCAAATGCTCCCAATATAATTTCGCCATGCTTTAACCAATACCATTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCAAATGCTCCCAATATAATTTCGCCATGCTTTAACCAATACCATTC  650

seq1  ATTATTTATTTGATGTATATGGAATGAGCATTGATATTTAGTAGTATAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTATTTGATGTATATGGAATGAGCATTGATATTTAGTAGTATAAA  700

seq1  GACACTGACCGTTGTCAAGTATAGCAATCTGTCAACTTATTCTTTCTGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTGACCGTTGTCAAGTATAGCAATCTGTCAACTTATTCTTTCTGAG  750

seq1  TGTGTAGGAGCCATATGTGTGTGCCTGCTTGGTCACGTGGGTGTTCTCGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTAGGAGCCATATGTGTGTGCCTGCTTGGTCACGTGGGTGTTCTCGC  800

seq1  CTAAGCAGATGCATGCAGAGGCCAGAGGTTGGTGCTCATGTCTATCTCTA  850
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CTAAGCAGATGCATGCAGAGGCCAAAGGTTGGTGCTCATGTCTATCTCTA  850

seq1  CTAAGCTGCACCTCAGCTTTGCACACAACATCTCTCACTCAGCCT-GAGC  899
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CTAAGCTGCACCTCAGCTTTGCACACAACATCTCTCACTCAGCCTGGAGC  900

seq1  TCGCTATTTCAGCTACAGTTGCTGCACAGTGAGCATCTTCCCACCAGCAC  949
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCTA-TTCAGCTACAGTTGCTGCACAGTGAGCATCTTCCCACCAGCAC  949

seq1  TAGGACTACAAGTACGGATAGTTACACTTGACCTCTGCCTGGGTGCGGAG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGACTACAAGTACGGATAGTTACACTTGACCTCTGCCTGGGTGCGGAG  999

seq1  AATCTGAACT-CAGGACCTCATGGTGGTAAGCATGCACTTTACCTGAGCT  1048
      |||||||||| ||||| || |||||| |||||||||||||||||||||||
seq2  AATCTGAACTCCAGGAACT-ATGGTGTTAAGCATGCACTTTACCTGAGCT  1048

seq1  C-CTATCTCCGCAGCCCCTGCTTACTCCTGTTCCAT-AAATTATAATTAT  1096
      | |||||  | ||||||||||||||| ||||||||| |||| ||| ||||
seq2  CTCTATCCTCCCAGCCCCTGCTTACT-CTGTTCCATAAAATAATATTTAT  1097

seq1  ATATTTTAGTTAACTCAGTAATATCAAAACATTTTTTATTTCAGGCTGTA  1146
      || |||| ||| ||||||||  ||| ||||||||||||||||| ||||||
seq2  ATCTTTT-GTT-ACTCAGTATAATC-AAACATTTTTTATTTCA-GCTGTA  1143

seq1  GAAATGGATCAGTGGTTAAAAGTAC  1171
       ||||||||||  |||| |||||||
seq2  -AAATGGATCA-CGGTT-AAAGTAC  1165

seq1: chr14_60714569_60715657
seq2: B6Ng01-021J24.g_68_1157 (reverse)

seq1  GCAAAGCTGTTTCATGGCTCTTGAGAACACAGGTACATCAGCGGCAGTTT  50
      |||||||| ||| |||||||||  ||||||||||||| |||| |||||||
seq2  GCAAAGCT-TTTTATGGCTCTTTGGAACACAGGTACA-CAGCCGCAGTTT  48

seq1  GGGTGCTAGAGA-GAGCCAGGGCTGATTACC-TCGCCTAATCAGACAGAC  98
       ||||||||||| |||||||||||||||||| ||||||||||||||||||
seq2  -GGTGCTAGAGAGGAGCCAGGGCTGATTACCTTCGCCTAATCAGACAGAC  97

seq1  ACAATGGCAGTGCTGGG-CAAATGCAGAATGTGGTTATTTTTGCCTTGGC  147
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  ACAATGGCAGTGCTGGGCCAAATGCAGAATGTGGTTATTTTTGCCTTGGC  147

seq1  AGACACACTTGAGAGGCTTCTCAAGACCCCAGTTTGCACAGACTGTGTCT  197
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AG-CACACTTGAGAGGCTTCTCAAGACCCCAGTTTGCACAGACTGTGTCT  196

seq1  CTCCAAATATAACAGATGTGATCC-ACTCCAAGCAAAAAGTTCCGAAGCT  246
      |||| |||| |||||||||||||| ||||| |||||||||||||||||||
seq2  CTCC-AATA-AACAGATGTGATCCAACTCC-AGCAAAAAGTTCCGAAGCT  243

seq1  CAGAGAACAATGGGAAG-ATGACAGTGATGCGTCC-GGATTTCTT-ATTT  293
      ||||||||||||||||| ||||||||||||||||| ||||||||| ||||
seq2  CAGAGAACAATGGGAAGAATGACAGTGATGCGTCCGGGATTTCTTAATTT  293

seq1  CTGTC-AACACTTACTGGATTCTTTTCTCTTCTCACGGGAATAAAGAGAA  342
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCAAACACTTACTGGATTCTTTTCTCTTCTCACGGGAATAAAGAGAA  343

seq1  TGCAGCAAAAGTAATAGGCCGTGGGCTGTTTATGACTTGAAATATTGTGG  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCAAAAGTAATAGGCCGTGGGCTGTTTATGACTTGAAATATTGTGG  393

seq1  ATGCTGGATTCATTCAGTGATCAAGTACCTCCTACATGGGAGGCATTTTG  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGGATTCATTCAGTGATCAAGTACCTCCTACATGGGAGGCATTTTG  443

seq1  CTGGGTGGTGGGAGGGAGAAATACACAGTTGAAGGCATAGCTTTTTTGTC  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTGGTGGGAGGGAGAAATACACAGTTGAAGGCATAGCTTTTTTGTC  493

seq1  AACCTGACACAAACTAGAGTCACTTGGGAGGAGAGAACCTTAATTGGGGA  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGACACAAACTAGAGTCACTTGGGAGGAGAGAACCTTAATTGGGGA  543

seq1  ATTGTCTCCATCAGATAGTCCTCTGAGCATGTCTATGAGCCATTTTCTTG  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTCTCCATCAGATAGTCCTCTGAGCATGTCTATGAGCCATTTTCTTG  593

seq1  ATTAATGATTGATGGTGGGAGGACCCAATCTATTGTGTGCAGTCCCGTTC  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATGATTGATGGTGGGAGGACCCAATCTATTGTGTGCAGTCCCGTTC  643

seq1  TTGGGAAAGTGGGTCTGGGCTATTCAGGGAAGCTAGCTAAGTAAGCCAGA  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGAAAGTGGGTCTGGGCTATTCAGGGAAGCTAGCTAAGTAAGCCAGA  693

seq1  GGGGACAATCGATCAGCTTTCCTCCATGGCTCTTGCTTCTGGTCCCACTT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGACAATCGATCAGCTTTCCTCCATGGCTCTTGCTTCTGGTCCCACTT  743

seq1  GAGTTCCTGCCCTGACTTCCCTCAGGGATAGACTGTGACTGGGATGTGTG  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCCTGCCCTGACTTCCCTCAGGGATAGACTGTGACTGGGATGTGTG  793

seq1  AGCCGAATAATCCCTTTCCCACTCGTGTTGCTTTGGTGCTAAAGCAGTGA  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCGAATAATCCCTTTCCCACTCGTGTTGCTTTGGTGCTAAAGCAGTGA  843

seq1  TGGGCATCTTGGATCCTGCCCCTACATCATCAAAGTAGCAGAGAGCCAAA  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCATCTTGGATCCTGCCCCTACATCATCAAAGTAGCAGAGAGCCAAA  893

seq1  CTACGACACTTCTATTCAGTAAGACCTGCAATACAGACTTCTGATCTCAA  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACGACACTTCTATTCAGTAAGACCTGCAATACAGACTTCTGATCTCAA  943

seq1  AACCCATTCTGTGTCCTGTGCTAACTCATCTTGTAAATTAAGCGAAGATA  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCATTCTGTGTCCTGTGCTAACTCATCTTGTAAATTAAGCGAAGATA  993

seq1  AATGTGCTTCTCTGGAAATGTATCTCATAGATAAAACCAGACTTTAAAGG  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGCTTCTCTGGAAATGTATCTCATAGATAAAACCAGACTTTAAAGG  1043

seq1  AAAAAAATCTATGCTACATAAATTCTCAGTTCAGAGAATGAGAATTC  1089
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAATCTATGCTACATAAATTCTCAGTTCAGAGAATGAGAATTC  1090