BAC Information

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BAC

Clone NameB6Ng01-022E07
Chromosome14 (Build37)
Map Location 11,048,463 - 11,049,285
singlet/doubletsinglet
Overlap geneFhit
Upstream geneLOC100041948, LOC100042415
Downstream geneLOC100041974, LOC667030
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-022E07.bB6Ng01-022E07.g
ACCDH854535DH854536
length1,134828
definitionDH854535|Mus musculus domesticus DNA, BAC clone: B6Ng01-022E07, 5' end.DH854536|Mus musculus domesticus DNA, BAC clone: B6Ng01-022E07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttcacctagttataaagggcaatttccaaattcatctggaataa
cgaaaaacctaggatagtgaaaactcttctcaacaataagagaacctctg
gtgggatcaccatcactgacctcaagctgtactacagagcaattgtgata
aaaactgcatggtactggtacagcgacagacagatagatcaatggaatag
aattgaagacccagaaatgaacccatacacctatggtcacttgatctttt
taagggagctaaaaccacccagtggggaaaaagacagcattttcaacaaa
tggtgctggcacaactggtggtcatcatgtagaagaatgcaaattgatcc
attcttatctccttgtacaaagctcaagtccaagtggatcaaggaactcc
acataaaaccagagacactgaaacttatagaggagaaagtagggaaaagc
ctcgaagatatgggcacagggggaaaatttctaaacaaaacagcaatggc
ttgtgctgtaagattgagaatcgacaaatgggacgtcataaaattgcaaa
gcttctgtaaggcaaaagaaactgtcaataagacaagaaggccaccaact
gattaggaaaggatctttaccagccctaaatgagatagcggactaatatc
ctatagatacaaagaactcaagaagatggactccagaaaaccaaataacc
ctatgaaaaaatggtgtacagagctaaacaatgaattctcaactgagaaa
taccgaatggctgagaagcacctgaaaaaatgttcaacatcgggacccgc
cgaacttaggaaattagtctgaacaggtgagagggtgcgccagagaacct
gacagccttctggaacaggcggaagcacagaggcgctgaggcagcaccct
ttgtgggccggggacagccagccacgttccggaccggagaacaggtgccc
gccctgctggggaggcgacctaagccacaccagcagcggtcgccatcttt
ggtcccggactccaaggaacttaggaataattcggcttagtgaagttgta
ccacggggaacggcagagcaatcaggggttagaaggtctgtttgggcttt
cttcttcgcgcgaggaggtcaaatcaaaaattgt
gaattcaggtaaacatgtttgctatgtggctgtaagtacctttacctgct
ggcccaaagtacaattttttaaaagtgaaacttaaagtgaagtctgaaat
ttaaacacagcttactttctgtcttgaaacatatattctttcatacactt
tgattttcttaagagtttgttgtgttactaggtagttcgaattctgattt
tgttccttttaaaatcactcaaccttatttgtctttgaaaaataatgata
aagccttgaagaaagttggcactcagtaattagtgtttggatggatgtac
agtaaatcactgtatatacagccaagagtagcccagtgtatatgtgtaat
tgctacaaattgaatagaatcatgatgataagaaatatatgtagggggat
atctgtctagaaatataaaatactggatgaaatagaattagtatatgtat
tataggtctgtttcagttttttcttttgaaatttcccataatttggagaa
attctacaacaagtaaagatgctttaacacttaagttggttggaactaag
agagctggagtgttttgttttgttttgtttttctattattagaagagatt
gtactagctgtttcaacaatatgcctttttcagttcctagggcaaaccaa
gtgtatctcctttcttggactccgtttagaaacatgggatgtatggtttt
ctttggggaagagctgaatagtttatatctcagatggtacctttgtttct
tcctctttgactcatgggaaagtaagaagacaattaaattgattttaaat
cacattttagcattatgtattgattaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_11048463_11049285
seq2: B6Ng01-022E07.g_68_895 (reverse)

seq1  TCTAATCAATACATAATGCT-AAATGTGATTTAAAATCAATTTAATTGTC  49
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TCTAATCAATACATAATGCTAAAATGTGATTTAAAATCAATTTAATTGTC  50

seq1  TTCTTACTTTCCCATGAGTC-AAGAGGGAGAAACAAAGGTACCATCTGAG  98
      |||||||||||||||||||| |||||| ||||||||||||||||||||||
seq2  TTCTTACTTTCCCATGAGTCAAAGAGGAAGAAACAAAGGTACCATCTGAG  100

seq1  ATATAAACTATTCAGCTCTTCCCCAAAG-AAACCATACATCCCATGTTTC  147
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  ATATAAACTATTCAGCTCTTCCCCAAAGAAAACCATACATCCCATGTTTC  150

seq1  T-AACGGAGTCCAAG-AAGGAGATACACTTGGTTTGCCCTAGGAACTGAA  195
      | ||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TAAACGGAGTCCAAGAAAGGAGATACACTTGGTTTGCCCTAGGAACTGAA  200

seq1  AAAGGCATATTGTTGAAACAGCTAGTACAATCTCTTCTAATAATAGAAAA  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCATATTGTTGAAACAGCTAGTACAATCTCTTCTAATAATAGAAAA  250

seq1  ACAAAACAAAACAAAACACTCCAGCTCTCTTAGTTCCAACCAACTTAAGT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACAAAACAAAACACTCCAGCTCTCTTAGTTCCAACCAACTTAAGT  300

seq1  GTTAAAGCATCTTTACTTGTTGTAGAATTTCTCCAAATTATGGGAAATTT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAAGCATCTTTACTTGTTGTAGAATTTCTCCAAATTATGGGAAATTT  350

seq1  CAAAAGAAAAAACTGAAACAGACCTATAATACATATACTAATTCTATTTC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGAAAAAACTGAAACAGACCTATAATACATATACTAATTCTATTTC  400

seq1  ATCCAGTATTTTATATTTCTAGACAGATATCCCCCTACATATATTTCTTA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGTATTTTATATTTCTAGACAGATATCCCCCTACATATATTTCTTA  450

seq1  TCATCATGATTCTATTCAATTTGTAGCAATTACACATATACACTGGGCTA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCATGATTCTATTCAATTTGTAGCAATTACACATATACACTGGGCTA  500

seq1  CTCTTGGCTGTATATACAGTGATTTACTGTACATCCATCCAAACACTAAT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGGCTGTATATACAGTGATTTACTGTACATCCATCCAAACACTAAT  550

seq1  TACTGAGTGCCAACTTTCTTCAAGGCTTTATCATTATTTTTCAAAGACAA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGAGTGCCAACTTTCTTCAAGGCTTTATCATTATTTTTCAAAGACAA  600

seq1  ATAAGGTTGAGTGATTTTAAAAGGAACAAAATCAGAATTCGAACTACCTA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGTTGAGTGATTTTAAAAGGAACAAAATCAGAATTCGAACTACCTA  650

seq1  GTAACACAACAAACTCTTAAGAAAATCAAAGTGTATGAAAGAATATATGT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACACAACAAACTCTTAAGAAAATCAAAGTGTATGAAAGAATATATGT  700

seq1  TTCAAGACAGAAAGTAAGCTGTGTTTAAATTTCAGACTTCACTTTAAGTT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGACAGAAAGTAAGCTGTGTTTAAATTTCAGACTTCACTTTAAGTT  750

seq1  TCACTTTTAAAAAATTGTACTTTGGGCCAGCAGGTAAAGGTACTTACAGC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTTTAAAAAATTGTACTTTGGGCCAGCAGGTAAAGGTACTTACAGC  800

seq1  CACATAGCAAACATGTTTACCTGAATTC  823
      ||||||||||||||||||||||||||||
seq2  CACATAGCAAACATGTTTACCTGAATTC  828