BAC Information

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BAC

Clone NameB6Ng01-022N08
Chromosome14 (Build37)
Map Location 5,267,410 - 5,268,559
singlet/doubletsinglet
Overlap geneLOC100041401
Upstream geneLOC100041076, LOC100040801, LOC666336, LOC100041100, LOC100040808, LOC100041119, 2610042L04Rik, LOC100041139, LOC100041151, LOC100041177, LOC100041162, LOC100040889, LOC100040900, LOC100040917, LOC100040928, EG666560, LOC666555, EG666549, LOC100041262, LOC665981, LOC100041283, LOC100040996, LOC673676, LOC100041007, LOC100041317, LOC100041306, LOC100041024, LOC100041336, EG666815, LOC666808, EG666800, LOC100041374, 4930555G01Rik, EG666772, LOC666765
Downstream geneLOC100041105, EG666750, LOC666743, LOC100041447, LOC673138, LOC666740, LOC641258, LOC673685, LOC100041158, LOC100041501, LOC100041515, LOC100041184, EG666706, LOC100041195, LOC100041545, LOC100041565, LOC100041215, LOC100041226, ENSMUSG00000057445, LOC100041598, LOC100041243, EG666684, LOC100041268, LOC100041279, LOC100041651, LOC100041287, LOC100041299, LOC666637, EG622640, LOC100041333, LOC100041678, LOC100041702
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-022N08.bB6Ng01-022N08.g
ACCDH854928DH854929
length1,1351,192
definitionDH854928|Mus musculus domesticus DNA, BAC clone: B6Ng01-022N08, 5' end.DH854929|Mus musculus domesticus DNA, BAC clone: B6Ng01-022N08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactgtctttatcttttctctccctccatcttcttcttgggactc
agaatggtctcccctgcccctggtccatcaagtatgcaaattcttttgtg
tttacctatctgcagggtctgctagaaatacttcaacccaaaattccaaa
atgactaagaagagatcaaaaataaatgaactagaagaactgaaattgga
tatgaggaagatcagcaatgacatggaggaaatgtgtggaatcctgaacc
tttacatgtatgaggatttgaactacaggtaggaattatgcccagtaccc
tgttgactgtattgtgccatctgttaacccaatttccttccatgaatgga
gtgcgtcatctcccatcattcaattaagtagccctgacaggtgtttaatt
gttggataaacaaggtgctgtgtgtttattatcatcttcttttgtacttg
accttggggtttttgcattctgattgttgctgtgaacagctagaatgtcc
tgctcacacttactgtctctcagtgtgtgaatgcaatgcctgcaggcttc
aaggctttactctgatattgttcattatattctgagagatggcacctgtc
tggatttatttggcattctaattgtgtctgtgtgtgtgaacatagttgca
tgtgttttgttcaggactggggctctgggacctttgatggggtctgagga
tttgtgtgatgcacagttttgcaggtcctgttagtgttgagtccatagag
gtccaaagtgatcaccagggaagtttgctcctggtgttcccttgtttgtc
acacaggaatctcctggaggagatgtgataaagcctttctcctgtaaata
ctagttgtatcctctgggaattcacattacaacagaaaccaagaaatgag
aatccctgccttaaaataagagaaagtcattacagatatctactggaccc
ttgccgtggcacagtgtagtgtaaattgtatagaagtactctatcctaca
tgcttgcccgggaggctcttgaagtcagctagctccatttggtctctggg
ctcgctgtgctctggccgggatagtagtttaatatgcacctagggaccag
tggatggaacccgaaggggcatgccttggcttggg
gaattcaaggcccatacctaaacatgacaaaagcaatctacagaaaacca
ccatcaaactaaatggagagaagctggaagcaatctcactaaaatcagga
actagacaaggatgcccactttctccctacctattcaatatagtacttga
agtcctagccagagcaattcgacaacaaaggaagatcgaggggatacaaa
ttggaaaggaagaagtcaaactatcactatttgcagatgatatgatagta
tgtataagtgatcctaataattccaccagagaactcctaatcctgataaa
cagcttcagtgcagtagctggatataaaattaactcaaacaaatgaatgc
cctttctctacacacaggataaacgggctgagaaagaaattagggaaaca
acaccattcacaagagtcacaaacaatataaaataccttggcgtgactct
aactaaggaagtgaaagatctgtatgataagaacttcaagtctgtgaaga
aagaaattgaagaagaacacagaagatggaaagatcccccatgctcatgg
gttggcaggattaatatagtcaaaatggctatcctgatgaaagcaatcta
cagattcaaacttccaactcaattcttcactgagttagaaaatgcaattt
gcaaattcatctggaataataaaaaaaacctaagatagcaaaaactattc
cctacaataaaagaacctctggggggaatcaccatgcctgaactcaagct
gtagtacagagcacttgtgctaaaaactgcatggtactagtacagcgaca
gacaggtagatcaatggaaaagaattgaagacccagaaatgaatccatac
acctatggtcacttgatctttgacaagggagctaaaacatccagtgggaa
aaagccagcattttcaccaaatggtgctgcacactggcagtcatgtagaa
gaatgcaattgatcattctatctcctaaacaggactcagtctagtggatc
aagtactccacataaaccaagagacactgaaactatagaggagaagtggg
ggaaagcctcaagattggcacagaaagttcgtgatgaacagcaatgcctg
ggctgtagatcgagatcgacaatggacctcaaattgcaagctagacctgc
ctggggcaatctggggtcaggttcgaaggtgcggttaattct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_5267410_5268559
seq2: B6Ng01-022N08.b_44_1178

seq1  GAATTCACTGTCTTTATCTTTTCTCTCCCTCCATCTTCTTCTTGGGACTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGTCTTTATCTTTTCTCTCCCTCCATCTTCTTCTTGGGACTC  50

seq1  AGAATGGTCTCCCCTGCCCCTGGGCCATCAAGTATGCAAATTCTTTTGTG  100
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AGAATGGTCTCCCCTGCCCCTGGTCCATCAAGTATGCAAATTCTTTTGTG  100

seq1  TTTACCTATCTGCAGGGTCTGCTAGAAATACTTCAACCCAAAATTCCAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCTATCTGCAGGGTCTGCTAGAAATACTTCAACCCAAAATTCCAAA  150

seq1  ATGACTAAGAAGAGATCAAAAAGAAATGAACTAGAAGAACTGAAATTGGA  200
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  ATGACTAAGAAGAGATCAAAAATAAATGAACTAGAAGAACTGAAATTGGA  200

seq1  TATGAGGAAGATCAGCAATGACATGGAGGAAATGTGTGGAATCCTGAACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGGAAGATCAGCAATGACATGGAGGAAATGTGTGGAATCCTGAACC  250

seq1  TTTACATGTATGAGGATTTGAACTACAGGTAGGAATTATGCCCAGTACCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACATGTATGAGGATTTGAACTACAGGTAGGAATTATGCCCAGTACCC  300

seq1  TGTTGACTGTATTGTGCCATCTGTTAACCCAATTTCCTTCCATGAATGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGACTGTATTGTGCCATCTGTTAACCCAATTTCCTTCCATGAATGGA  350

seq1  GTGCGTCATCTCCCATCATTCAATTAAGTAGCCCTGACAGGTGTTTAATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCGTCATCTCCCATCATTCAATTAAGTAGCCCTGACAGGTGTTTAATT  400

seq1  GTTGGATAAACAAGGTGCTGTGTGTTTATTATCATCTTCTTTTGTACTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGATAAACAAGGTGCTGTGTGTTTATTATCATCTTCTTTTGTACTTG  450

seq1  ACCTTGGGGTTTTTGCATTCTGATTGTTTCTGTGAACAGCTAGAATGTCC  500
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  ACCTTGGGGTTTTTGCATTCTGATTGTTGCTGTGAACAGCTAGAATGTCC  500

seq1  TGCTCACACTTACTGTCTCTCAGTGTGTGAATGCAATGCCTGCAGGCTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCACACTTACTGTCTCTCAGTGTGTGAATGCAATGCCTGCAGGCTTC  550

seq1  AAGGCTTTACTCTGATATTGTTCATTATATTCTGAGAGATGGCACCTGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTTTACTCTGATATTGTTCATTATATTCTGAGAGATGGCACCTGTC  600

seq1  TGGATTTATTTGGCATTCTAATTGTGTCTGTGTGTGTGAACATAGTTGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||  
seq2  TGGATTTATTTGGCATTCTAATTGTGTCTGTGTGTGTGAACATAGTTGCA  650

seq1  TGTGTTTTGTTCAGGACTGGGGCTTTGGGACCTTTGATGGGGTCTGAGGA  700
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TGTGTTTTGTTCAGGACTGGGGCTCTGGGACCTTTGATGGGGTCTGAGGA  700

seq1  TTTGTGTGATGCACAG-TTTGCAGGTCCAGTTAGTGTTGAGTCCATAGAG  749
      |||||||||||||||| ||||||||||| |||||||||||||||||||||
seq2  TTTGTGTGATGCACAGTTTTGCAGGTCCTGTTAGTGTTGAGTCCATAGAG  750

seq1  GTCCAAAGTGATCACCAGGGAAGTTTGCTCCTGGTGTTTCCTTG-TTGTC  798
      |||||||||||||||||||||||||||||||||||||| ||||| |||||
seq2  GTCCAAAGTGATCACCAGGGAAGTTTGCTCCTGGTGTTCCCTTGTTTGTC  800

seq1  ACACAGGAATCTCCTGGAGGAGGAGATGTGATAAAGCCTTTCTCCTGTAA  848
      |||||||||||||||   ||||||||||||||||||||||||||||||||
seq2  ACACAGGAATCTCCT---GGAGGAGATGTGATAAAGCCTTTCTCCTGTAA  847

seq1  ATACTAGTTGTGTCCTCTGGGAATTCACATAACAACAGGAACCAAGGAAT  898
      ||||||||||| |||||||||||||||||| ||||||| ||||||| |||
seq2  ATACTAGTTGTATCCTCTGGGAATTCACATTACAACAGAAACCAAGAAAT  897

seq1  GAGAATCCCTGCCTTAAAAATAAGAGGAAAGTCATTACAGATATCTACTG  948
      ||||||||||||||| ||||||||| ||||||||||||||||||||||||
seq2  GAGAATCCCTGCCTT-AAAATAAGA-GAAAGTCATTACAGATATCTACTG  945

seq1  GACCCTTGCCTGTGGCACAGTGTAGTGTAAAATTGTCATAGAATTACTCT  998
      |||||||||| ||||||||||||||||| ||||||| |||||| ||||||
seq2  GACCCTTGCC-GTGGCACAGTGTAGTGT-AAATTGT-ATAGAAGTACTCT  992

seq1  ATTCCTACATGCTTGCCCGGGAAGCCCTTGAAGGTCAGCTAGCTCCATTT  1048
      | |||||||||||||||||||| || |||||| |||||||||||||||||
seq2  A-TCCTACATGCTTGCCCGGGAGGCTCTTGAA-GTCAGCTAGCTCCATTT  1040

seq1  GGTCTCCTGGCTCTGCTGTCCTCTGCCCAGGATAGTAAGTTTAATTAGCA  1098
      ||||||  ||||| ||||| ||||| || ||||||| ||||||||  |||
seq2  GGTCTCTGGGCTC-GCTGTGCTCTGGCCGGGATAGT-AGTTTAATATGCA  1088

seq1  CCTAGGGGACCCAGTTTGAATGAGCCAGGATGTGGCATGCACTTGGCTTG  1148
      |||||||   ||||  || |||   |  || | ||||||| |||||||||
seq2  CCTAGGG--ACCAG--TGGATGGAACCCGAAGGGGCATGC-CTTGGCTTG  1133

seq1  GG  1150
      ||
seq2  GG  1135