BAC Information

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BAC

Clone NameB6Ng01-023G20
Chromosome14 (Build37)
Map Location 45,695,646 - 45,822,842
singlet/doubletdoublet
Overlap geneLOC100041591, 5730420B22Rik
Upstream geneLOC100041422, EG666638, 4930503E14Rik, EG666647, EG624862, EG666660, EG666667, EG546250, EG666675, LOC100041494, LOC100041497, EG666678, LOC676402, BC061237, LOC434476, EG666707, LOC100042570, LOC666723, LOC673290, EG666725, EG624966, EG666744, Ptgdr, Ptger2
Downstream geneLOC100041611, 6330416L11Rik, Ero1l, Psmc6, Styx, Gnpnat1, Plekhc1, EG382884, Ddhd1, EG637379, LOC666834, LOC100041685, LOC625377, LOC218963
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-023G20.bB6Ng01-023G20.g
ACCDH855350DH855351
length798617
definitionDH855350|Mus musculus domesticus DNA, BAC clone: B6Ng01-023G20, 5' end.DH855351|Mus musculus domesticus DNA, BAC clone: B6Ng01-023G20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(45,695,646 - 45,696,441)(45,822,227 - 45,822,842)
sequence
gaattctatccatgccaaaggtgctctggtatcccaagatctttgaaata
gccttcatagtttcttaatataatgttgataaattctcatagtacaagtt
tatgaaattatccaactttcatatatgaatttgaattctgtcttccaact
aggttttacttgtatttttcttgtaagtatatatgctatagttgtctaga
ggaatgctgaaatgaaaggggtagttcacagaacctaaagggtcttccct
ccttgaacaaatgctaggtagacactccatagagagaccttattaaatgt
atgggctcctcttacttttcttgttgatacaaagacctgacaaatttcta
attgacacctactctcaagaagaaaaatagtttttccaacaatgtctcat
tgggtatacaaacagcacttaagaccaggccccatgaacaatagtagatg
ggcaacacaaaataaacttaatactatttttggatgtgtgtgtgtgtgtg
cacacgcacgcacgcacgcgcgcatgtgtgtgtgtgatattactttgtta
ggcattttttttaatcttaccagtctttttgcttatatattatggtttct
ggtttcatgatttttatggtttctctctctttttctctctttctctcttt
ctctctttctctctgtctctgtctctgtctctgtctctctcatgtgtgtg
tgtgtctgtgtgttttctgtgtgtgtgttgtgttctttaattttaatttg
cctgtttgttttctaaggagagagaggtgtggagttggatgggtgggg
gaattcttgttggctttcagaaactttttattattggcaaagttttcatg
accttcatattccagtacccaagcacgtatccacagttgaagagctagct
tgctttagactagtgtgcttaatatgtaccactgtattcagtgcctggtt
tttttttttttgagattagaatttagttacatttctcccttcccttttcc
tctcccatatatcccatagtctccatattcatggtctcccccttcttact
aattgttattacatgcatatatgtatttatatatacatatgtattcctaa
atatgacctgttgggtccatataatgccactcatatgtaaatctgcattt
ccgaggcctccttatctcagactttggctaaggtactttctaggtgcttc
tgctaagaagttgaagtcaatggtccttggtagaagctgggggggttgtt
gttgttgtttttaacattttgagttactcctagcacttcccattacctct
gcttccctggcctgaagaagaggcagtgaggagccctttgggagaagatt
gcttgtatctgcaccatgtgtacctggctattgattgttagaaagaatta
tgaatattgtggaattc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_45695646_45696441
seq2: B6Ng01-023G20.b_42_839

seq1  GAATTCTATCCATGCCAAAGGTGCTCTGGTATCCCAAGATCTTTGAAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATCCATGCCAAAGGTGCTCTGGTATCCCAAGATCTTTGAAATA  50

seq1  GCCTTCATAGTTTCTTAATATAATGTTGATAAATTCTCATAGTACAAGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTCATAGTTTCTTAATATAATGTTGATAAATTCTCATAGTACAAGTT  100

seq1  TATGAAATTATCCAACTTTCATATATGAATTTGAATTCTGTCTTCCAACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAAATTATCCAACTTTCATATATGAATTTGAATTCTGTCTTCCAACT  150

seq1  AGGTTTTACTTGTATTTTTCTTGTAAGTATATATGCTATAGTTGTCTAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTTACTTGTATTTTTCTTGTAAGTATATATGCTATAGTTGTCTAGA  200

seq1  GGAATGCTGAAATGAAAGGGGTAGTTCACAGAACCTAAAGGGTCTTCCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGCTGAAATGAAAGGGGTAGTTCACAGAACCTAAAGGGTCTTCCCT  250

seq1  CCTTGAACAAATGCTAGGTAGACACTCCATAGAGAGACCTTATTAAATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGAACAAATGCTAGGTAGACACTCCATAGAGAGACCTTATTAAATGT  300

seq1  ATGGGCTCCTCTTACTTTTCTTGTTGATACAAAGACCTGACAAATTTCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGCTCCTCTTACTTTTCTTGTTGATACAAAGACCTGACAAATTTCTA  350

seq1  ATTGACACCTACTCTCAAGAAGAAAAATAGTTTTTCCAACAATGTCTCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGACACCTACTCTCAAGAAGAAAAATAGTTTTTCCAACAATGTCTCAT  400

seq1  TGGGTATACAAACAGCACTTAAGACCAGGCCCCATGAACAATAGTAGATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTATACAAACAGCACTTAAGACCAGGCCCCATGAACAATAGTAGATG  450

seq1  GGCAACACAAAATAAACTTAATACTATTTTTGGATGTGTGTGTGTGTGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAACACAAAATAAACTTAATACTATTTTTGGATGTGTGTGTGTGTGTG  500

seq1  CACACGCACGCACGCACGCGCGCATGTGTGTGTGTGATATTACTTTGTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACGCACGCACGCACGCGCGCATGTGTGTGTGTGATATTACTTTGTTA  550

seq1  GGCATTTTTTTTAATCTTACCAGTC-TTTTGCTTATATATTATGGTTTCT  599
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GGCATTTTTTTTAATCTTACCAGTCTTTTTGCTTATATATTATGGTTTCT  600

seq1  GGTTTCATGA-TTTTATGGTTTCTCTCTCTTTTTCTCTCTTTCTCTCTTT  648
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GGTTTCATGATTTTTATGGTTTCTCTCTCTTTTTCTCTCTTTCTCTCTTT  650

seq1  CTCTCTTTCTCTCTGTCTCTGTCTCTGTCTCTGTCTCTCTCATGTGTGTG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTTTCTCTCTGTCTCTGTCTCTGTCTCTGTCTCTCTCATGTGTGTG  700

seq1  TGTGTCTGTGTG-TTTCTGTGTGTGTGTTGTGTTCTTTAATTTTTAATTT  747
      |||||||||||| ||||||||||||||||||||||||||| |||||||||
seq2  TGTGTCTGTGTGTTTTCTGTGTGTGTGTTGTGTTCTTTAA-TTTTAATTT  749

seq1  GCCTGTTTGTTTTCTAAGGAGAGAGAGGTGTGGAGTTGGATGGGTGGGG  796
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTTTGTTTTCTAAGGAGAGAGAGGTGTGGAGTTGGATGGGTGGGG  798

seq1: chr14_45822227_45822842
seq2: B6Ng01-023G20.g_70_685 (reverse)

seq1  AATTCCACAATATTCATAATTCTTTCTAACAATCAATAGCCAGGTACACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCACAATATTCATAATTCTTTCTAACAATCAATAGCCAGGTACACA  50

seq1  TGGTGCAGATACAAGCAATCTTCTCCCAAAGGGCTCCTCACTGCCTCTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGCAGATACAAGCAATCTTCTCCCAAAGGGCTCCTCACTGCCTCTTC  100

seq1  TTCAGGCCAGGGAAGCAGAGGTAATGGGAAGTGCTAGGAGTAACTCAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGCCAGGGAAGCAGAGGTAATGGGAAGTGCTAGGAGTAACTCAAAA  150

seq1  TGTTAAAAACAACAACAACAACCCCCCCAGCTTCTACCAAGGACCATTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAAAAACAACAACAACAACCCCCCCAGCTTCTACCAAGGACCATTGA  200

seq1  CTTCAACTTCTTAGCAGAAGCACCTAGAAAGTACCTTAGCCAAAGTCTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAACTTCTTAGCAGAAGCACCTAGAAAGTACCTTAGCCAAAGTCTGA  250

seq1  GATAAGGAGGCCTCGGAAATGCAGATTTACATATGAGTGGCATTATATGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAGGAGGCCTCGGAAATGCAGATTTACATATGAGTGGCATTATATGG  300

seq1  ACCCAACAGGTCATATTTAGGAATACATATGTATATATAAATACATATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAACAGGTCATATTTAGGAATACATATGTATATATAAATACATATAT  350

seq1  GCATGTAATAACAATTAGTAAGAAGGGGGAGACCATGAATATGGAGACTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTAATAACAATTAGTAAGAAGGGGGAGACCATGAATATGGAGACTA  400

seq1  TGGGATATATGGGAGAGGAAAAGGGAAGGGAGAAATGTAACTAAATTCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGATATATGGGAGAGGAAAAGGGAAGGGAGAAATGTAACTAAATTCTA  450

seq1  ATCTCAAAAAAAAAAAAACCAGGCACTGAATACAGTGGTACATATTAAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCAAAAAAAAAAAAACCAGGCACTGAATACAGTGGTACATATTAAGC  500

seq1  ACACTAGTCTAAAGCAAGCTAGCTCTTCAACTGTGGATACGTGCTTGGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTAGTCTAAAGCAAGCTAGCTCTTCAACTGTGGATACGTGCTTGGGT  550

seq1  ACTGGAATATGAAGGTCATGAAAACTTTGCCAATAATAAAAAGTTTCTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGAATATGAAGGTCATGAAAACTTTGCCAATAATAAAAAGTTTCTGA  600

seq1  AAGCCAACAAGAATTC  616
      ||||||||||||||||
seq2  AAGCCAACAAGAATTC  616