BAC Information

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BAC

Clone NameB6Ng01-024N15
Chromosome14 (Build37)3 (Build37)
Map Location 41,268,291 - 41,268,910144,988,514 - 144,989,532
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneNrg3, LOC100040439, LOC218945, LOC100040470
Downstream geneLOC382876, Sh2d4b, Tspan14, 5730469M10Rik, Dydc2, EG622782, Dydc1, Mat1a, Sftpa1, LOC100040498, LOC666079, Mbl1, Sftpd, LOC666093, EG666099, LOC100040545, LOC676294, LOC545034, LOC100040587, EG666138, EG624191, EG666149, LOC666155, EG666156
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-024N15.bB6Ng01-024N15.g
ACCDH856365DH856366
length9711,023
definitionDH856365|Mus musculus domesticus DNA, BAC clone: B6Ng01-024N15, 5' end.DH856366|Mus musculus domesticus DNA, BAC clone: B6Ng01-024N15, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(41,268,291 - 41,268,910)(144,988,514 - 144,989,532)
sequence
gaattccttataaccccatgggacaaagaatagttgaacatgctcatcac
actttaaaaaattgacttttaaaaacaaaacaggggctgttatatccccc
aaggtcaccaaacgcacatcttgcttttgctttatttgttctaaattttt
tgcaaactgatgttaaaggtcagactgcagtggatcaccactggcatcca
gttacttctagttcttatgccatggtaaagtggcgggacccattaactaa
tgaatggaagggtccagacccagtcctaatctggggaagaggctcggtct
gtgttttttcacaaaaagaagacggagctcatggctacctgaaagattag
ttcgtcaactggacacagatcctgaatcttccattaagtatgactctgac
cttgattatagctaaaatcctctttagttgaaaagttaatttggagcaca
gcctcctctcccagaaagttacagcctttctgtgattctcaaagtcacct
cccccacaccaggagctctaagtctagcctgatcgttgctaatttgcaat
tgaatggagtacctggacttctccaaagaagctttttgtacttttgcttt
tcactgtctcgactttgttttttcaagcaggtcagtcaatgcccttcagc
ctgactgcagcaggtgtgcagccccgcctccaacagcgcaggtggcagtt
attaatcctcatcaagaagcattctaagtacatattgtggcttttggtct
gaatttgggaataacgtgtgctaatgagggctggacagtctcagatctca
gaaccatacgaatttaagacaggtacatgccaaaaggccgtggcttttga
taacacaccacaaagccatgttttgtgtgaatataacacaaactagctgc
acttagtagcctctagatggaattggatagtttctgaaagatctagattt
catttcacttaggaggaatca
gaattcatgaacacaaaataatgttatctaataccatacactgtgtatag
catcgatggagacatggctgaagccagtgatatacaacacgtacctaacg
cttccctaagtgactcttaactatcatatccagggccccaaaggagatcc
tgggctgtccccaggccaagctgcttctggagaaaaggtaattatttgtc
aatgaaataaagatattttaatttatttttaatgtttaatgttaataaaa
atttccagggggttgggaagatggtttagcaggtaaagtgcttattgcac
atgcatgaggttctgagtttggagccctagcaaccttggtttaagactgt
atatggtcgatgctgctggagtatgtcactttagtgctgggaggcaagaa
aggcaaatcctaggtgctttccccaagttccaggttgagttagggaccct
gcgtcaaaaaataaggcaaacagtgatggagaagaccagcattacctctg
acctccatgtgtgcatatgtgaatgaggacattcactttgtgcgtgttca
tacacacacacatacacatacatccatacatgtacacatgtattaataaa
tactattttctccctttaaaaaataaattttattgtggccagagaggaaa
gcagaagactattgaattttaataagaaagaatcgagtagattatgctcc
atagacttgcgttgctgctttgagtctttcccattgattttataaagtgt
ctgctggagcttgactttgtggctgacagggtgaatggggtggagcattg
gagcagaatgtggccttctgttttactgttgatatgcaagacatgatgca
tgttaggaaggttctaactctttacatggtatcaaggctaccgtgactcc
tagagatagtttaatgtaattggattgcagaacttttataaatttaagcc
cattaggatccacaaaacattatctaaaattttaggaatttctttctgtt
atagactgaatcgagtttgaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_41268291_41268910
seq2: B6Ng01-024N15.b_355_967

seq1  CAAAAAGAAGAGGGAGCGGGATGGCTGCCTGAGAGATTAGTTTGTCAACT  50
      ||||||||||| |||||   |||||| ||||| ||||||||| |||||||
seq2  CAAAAAGAAGACGGAGC-TCATGGCTACCTGAAAGATTAGTTCGTCAACT  49

seq1  GGACACAGATCCTGAATCTCCCAGGAAGTATGACTCTGACCTTGATTATA  100
      ||||||||||||||||||| |||  |||||||||||||||||||||||||
seq2  GGACACAGATCCTGAATCTTCCATTAAGTATGACTCTGACCTTGATTATA  99

seq1  GCTAAAAATCCTCTTTAGCCGAAAAGTTAATTTGGAGCACAGCCTCTGCT  150
      ||| ||||||||||||||  ||||||||||||||||||||||||||  ||
seq2  GCT-AAAATCCTCTTTAGTTGAAAAGTTAATTTGGAGCACAGCCTCCTCT  148

seq1  CCCAGAAAGTTACAGCCTTTCTGTGATTCTCAAAGTCACCTCCCCCACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGAAAGTTACAGCCTTTCTGTGATTCTCAAAGTCACCTCCCCCACAC  198

seq1  CAGGTGCTCTGAGTCTAAGCCTGATCATTGCTAATTTGCAATTGAATGGA  250
      |||| ||||| ||||| ||||||||| |||||||||||||||||||||||
seq2  CAGGAGCTCTAAGTCT-AGCCTGATCGTTGCTAATTTGCAATTGAATGGA  247

seq1  GTACCTGGACTTCCCCAAAGAAGC-TTTTGTACTGTTGCTTTTCACTGTC  299
      ||||||||||||| |||||||||| ||||||||| |||||||||||||||
seq2  GTACCTGGACTTCTCCAAAGAAGCTTTTTGTACTTTTGCTTTTCACTGTC  297

seq1  TCGACTTTG-TTTTTCAAGCAGGTTAGTCAACGCCCCTCAGCCTGACTGC  348
      ||||||||| |||||||||||||| |||||| |||| |||||||||||||
seq2  TCGACTTTGTTTTTTCAAGCAGGTCAGTCAATGCCCTTCAGCCTGACTGC  347

seq1  AGCAGGTGTGCACCCTTGCCTCCAACAGCACTGGTGGCATTTATTAAATC  398
      |||||||||||| ||  |||||||||||| | ||||||| ||||| ||||
seq2  AGCAGGTGTGCAGCCCCGCCTCCAACAGCGCAGGTGGCAGTTATT-AATC  396

seq1  TTCATGAAGAAGCATTCATAGTACATATTATGGC-TTTGTTCTGAA-TTG  446
       |||| |||||||||||  |||||||||| |||| |||| |||||| |||
seq2  CTCATCAAGAAGCATTCTAAGTACATATTGTGGCTTTTGGTCTGAATTTG  446

seq1  GGAATAAGGTGTGCTAATGAGGGCCTGACAGTCAATGACCGGCACCCAGA  496
      ||||||| ||||||||||||||||  ||||||            | ||||
seq2  GGAATAACGTGTGCTAATGAGGGCTGGACAGT------------CTCAGA  484

seq1  TCTCAGAACCATACCAATCTAAGACAGAGGTACATGCCAAAA------GG  540
      |||||||||||||| ||| ||||||  |||||||||||||||      ||
seq2  TCTCAGAACCATACGAATTTAAGAC--AGGTACATGCCAAAAGGCCGTGG  532

seq1  CTGTTGATAACACACCACAGAGCCATGTTTTGTGTGAAATATAACACAAA  590
      || |||||||||||||||| |||||||||||||||| |||||||||||||
seq2  CTTTTGATAACACACCACAAAGCCATGTTTTGTGTG-AATATAACACAAA  581

seq1  CTACCTGCAC---GTAGCCTCCAAGATGGAATT  620
      ||| ||||||   ||||||| | ||||||||||
seq2  CTAGCTGCACTTAGTAGCCT-CTAGATGGAATT  613

seq1: chr3_144988514_144989532
seq2: B6Ng01-024N15.g_68_1078

seq1  GAATTCATGAACACAAAATAATGTTATCTAATACCATACACTGTGTATAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGAACACAAAATAATGTTATCTAATACCATACACTGTGTATAG  50

seq1  CATCGATGGAGACATGGCTGAAGCCAGTGATATACAACACGTACCTAACG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCGATGGAGACATGGCTGAAGCCAGTGATATACAACACGTACCTAACG  100

seq1  CTTCCCTAAGTGACTCTTAACTATCATATCCAGGGCCCCAAAGGAGATCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCTAAGTGACTCTTAACTATCATATCCAGGGCCCCAAAGGAGATCC  150

seq1  TGGGCTGTCCCCAGGCCAAGCTGCTTCTGGAGAAAAGGTAATTATTTGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCTGTCCCCAGGCCAAGCTGCTTCTGGAGAAAAGGTAATTATTTGTC  200

seq1  AATGAAATAAAGATATTTTAATTTATTTTTAATGTTTAATGTTAATAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAATAAAGATATTTTAATTTATTTTTAATGTTTAATGTTAATAAAA  250

seq1  ATTTCCAGGGGGTTGGGAAGATGGTTTAGCAGGTAAAGTGCTTATTGCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCAGGGGGTTGGGAAGATGGTTTAGCAGGTAAAGTGCTTATTGCAC  300

seq1  ATGCATGAGGTTCTGAGTTTGGAGCCCTAGCAACCTTGGTTTAAGACTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATGAGGTTCTGAGTTTGGAGCCCTAGCAACCTTGGTTTAAGACTGT  350

seq1  ATATGGTCGATGCTGCTGGAGTATGTCACTTTAGTGCTGGGAGGCAAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGTCGATGCTGCTGGAGTATGTCACTTTAGTGCTGGGAGGCAAGAA  400

seq1  AGGCAAATCCTAGGTGCTTTCCCCAAGTTCCAGGTTGAGTTAGGGACCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAAATCCTAGGTGCTTTCCCCAAGTTCCAGGTTGAGTTAGGGACCCT  450

seq1  GCGTCAAAAAATAAGGCAAACAGTGATGGAGAAGACCAGCATTACCTCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTCAAAAAATAAGGCAAACAGTGATGGAGAAGACCAGCATTACCTCTG  500

seq1  ACCTCCATGTGTGCATATGTGAATGAGGACATTCACTTTGTGCGTGTTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCCATGTGTGCATATGTGAATGAGGACATTCACTTTGTGCGTGTTCA  550

seq1  TACACACACACATACACATACATCCATACATGTACACATGTATTAATAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACACACACATACACATACATCCATACATGTACACATGTATTAATAAA  600

seq1  TACTATTTTCTCCCTTTAAAAAATAAATTTTATTGTGGCCAGAGAGGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATTTTCTCCCTTTAAAAAATAAATTTTATTGTGGCCAGAGAGGAAA  650

seq1  GCAGAAGACTATTGAATTTTAATAAGAAAGAATCGAGTAGATTATGCTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAGACTATTGAATTTTAATAAGAAAGAATCGAGTAGATTATGCTCC  700

seq1  ATAGACTTGCGTTGCTGCTTTGAGTC-TTCCCATTGATTTTATAAAGTGT  749
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  ATAGACTTGCGTTGCTGCTTTGAGTCTTTCCCATTGATTTTATAAAGTGT  750

seq1  CTGCTGGAGCTTGACTTTGTGGCTGACAGGGTGAATGGGGTGGAGCATTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGGAGCTTGACTTTGTGGCTGACAGGGTGAATGGGGTGGAGCATTG  800

seq1  GAGCAGAATGTGGCCTTCTGTTTTACTGTTGATATGCAGGACATGATGCA  849
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GAGCAGAATGTGGCCTTCTGTTTTACTGTTGATATGCAAGACATGATGCA  850

seq1  TGTTAGGAAGGTTCTAACTCTTTACATGGTATCAAGGCTACCGTGACTCC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAGGAAGGTTCTAACTCTTTACATGGTATCAAGGCTACCGTGACTCC  900

seq1  TAGAGATAGTTTTAATGTAATTGGATTGCAGAAACTTTTATAAATTTAAA  949
      ||||||||| ||||||||||||||||||||| ||||||||||||||| ||
seq2  TAGAGATAG-TTTAATGTAATTGGATTGCAG-AACTTTTATAAATTT-AA  947

seq1  GCCACATTAGGAATCCACAAAAACATTAATCTAAAATTTTAGGAATTTTC  999
      ||| ||||||| |||||| |||||||| ||||||||||||||||| ||||
seq2  GCC-CATTAGG-ATCCAC-AAAACATT-ATCTAAAATTTTAGGAA-TTTC  992

seq1  TTTCTGTTATAGAACTGAAT  1019
      |||||||||||| |||||||
seq2  TTTCTGTTATAG-ACTGAAT  1011