BAC Information

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BAC

Clone NameB6Ng01-028P15
Chromosome14 (Build37)
Map Location 22,209,317 - 22,356,280
singlet/doubletdoublet
Overlap geneAdk, Myst4
Upstream geneMrps16, Ttc18, Anxa7, Zmynd17, Ppp3cb, Usp54, Myoz1, Synpo2l, Sec24c, Fut11, Chchd1, 2310021P13Rik, Ndst2, Camk2g, Plau, EG620119, Vcl, Ap3m1
Downstream geneEG435391, Dusp13, Samd8, Vdac2, Comtd1, Zfp503, 1700112E06Rik, EG665075
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-028P15.bB6Ng01-028P15.g
ACCDH859307DH859308
length1,0681,057
definitionDH859307|Mus musculus domesticus DNA, BAC clone: B6Ng01-028P15, 5' end.DH859308|Mus musculus domesticus DNA, BAC clone: B6Ng01-028P15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,209,317 - 22,210,387)(22,355,208 - 22,356,280)
sequence
gaattctgtatgacacacttgccctctgtgactcatgttttcatgaagga
attatttcaccatgttatttcctctgcatatggtttaaacctgtagtgct
tagaaggttgcaggaggaacggtggctggagacccagagaacaaaggccc
tggaaggtctgtggaaccttcccagggttcctttatctgcctgagctgct
gttgtatctcggtacccaggaacttctgagacaaaccatgaccttgactt
tctgcgctatgagattggatttgccattttatatctatcataaattagag
atcattgcaaggttgctgtgaaggatcagctttgctgtttgttatgatca
catcaacactgtgtttgcagatagcccgtctggggtctgttaagcattta
aaccttaagccttcataacaaatccgtaaatattaacgatcttcagcctt
aactctaggaacttttggaacttggatcatggagaagtcagggcaggttt
ggaaatagactggtgtttcttggtttctatcataacatttgtatattcaa
attaatcttgttagattttttttaatacaaagatctgttggaagaaaagg
agaatatcatgtgttttcatttcatttcattttgagatcatatttacttt
tattttgtgtgcgtaagtgtctgcttgaatgtgcttataatgtctgtgca
ataggtgcttgtaatgcctgcagaggccaaaagataaaatcaggtccctg
ggacggagtgcaaatactggaaggctccatgtaggtactgtgaaccaaac
ctggctcctccggaagagccaccagggttcttaatagctagtcatctctc
cagccctaaatcatattttttaagtacagttggctagagtaagcctttag
ctgtctctttgttggtatttgagcatatgaagcagatcataatcaaggag
tcattagatttctttgacaggtgcaatagagtccaattcagcttgctact
tgttaatttatctataaagcatggtcacatttgtcattattgacatcatg
accattggtctgggttct
gaattctgggaggcttggagacttccaaaaataacatccaaagttttgct
aggacatgaaggtcatgtgctgcatggcctgaggactgcagccctcgcta
actttagtgtcagcttctctacaacagtgtgcttggtgcagaccatttat
tggcaactgcagcatggcttgcttacttgcagcacaggttccagaacatg
gagttacttgcaaacactttgctgtatggagcattacatgggttagtaca
cgcgagggaagaataaagaggctctatgggagaagagaacggtggggccc
tgagaaggaacaacgagaggactgcgcacagagcaagtctgaacaagcaa
acaggagcaggagtgggagacgatcaaaatgatctccataagaaaaggac
aaataaacctggtggtggtggcgcacacctttaatcccagcactgggagg
cggatttctgagtttgaagccagcctaatctacaaagtgagttccaagac
atccagggctacacagagaaaccctgtcttgaaaaaaaccaaggggaaaa
aaaaaaaaaaagaaagaaaagaaatagcagctgaaatgatctctttcaac
aaacaattgatcttcaacaaaactatcaaatggatcaatttacaagtggc
tgttatcagatggggagacagcactgagcatccaaagactctgccactca
ccctaattaagacgtggagaagacaaattgaaacatcaccaattctaaca
cgcaaaccaaattctgcccttgggaatttcaatttcaggcctgtgcttaa
aatctatgtgcattaactctgacagcatatcagaaaacatgacacatgtc
tcctgatcaccctaaatacaacctccaaaaccattcaagttgaaaatatg
tgtcaagctgtttctaaataaaccagcaactacacaacaacttgcattca
tgcaagttttttctcatggggaaggggtttgagtgcaaataatcagagac
atggtatggtaggcagacttatatagttgtgctagcttaatacgaacctg
atgcctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_22209317_22210387
seq2: B6Ng01-028P15.b_46_1113

seq1  GAATTCTGTATGACACACTTGCCCTCTGTGACTCATGTTTTCATGAAGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTATGACACACTTGCCCTCTGTGACTCATGTTTTCATGAAGGA  50

seq1  ATTATTTCACCATGTTATTTCCTCTGCATATGGTTTAAACCTGTAGTGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTCACCATGTTATTTCCTCTGCATATGGTTTAAACCTGTAGTGCT  100

seq1  TAGAAGGTTGCAGGAGGAACGGTGGCTGGAGACCCAGAGAACAAAGGCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGGTTGCAGGAGGAACGGTGGCTGGAGACCCAGAGAACAAAGGCCC  150

seq1  TGGAAGGTCTGTGGAACCTTCCCAGGGTTCCTTTATCTGCCTGAGCTGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGGTCTGTGGAACCTTCCCAGGGTTCCTTTATCTGCCTGAGCTGCT  200

seq1  GTTGTATCTCGGTACCCAGGAACTTCTGAGACAAACCATGACCTTGACTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTATCTCGGTACCCAGGAACTTCTGAGACAAACCATGACCTTGACTT  250

seq1  TCTGCGCTATGAGATTGGATTTGCCATTTTATATCTATCATAAATTAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCGCTATGAGATTGGATTTGCCATTTTATATCTATCATAAATTAGAG  300

seq1  ATCATTGCAAGGTTGCTGTGAAGGATCAGCTTTGCTGTTTGTTATGATCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTGCAAGGTTGCTGTGAAGGATCAGCTTTGCTGTTTGTTATGATCA  350

seq1  CATCAACACTGTGTTTGCAGATAGCCCGTCTGGGGTCTGTTAAGCATTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAACACTGTGTTTGCAGATAGCCCGTCTGGGGTCTGTTAAGCATTTA  400

seq1  AACCTTAAGCCTTCATAACAAATCCGTAAATATTAACGATCTTCAGCCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTAAGCCTTCATAACAAATCCGTAAATATTAACGATCTTCAGCCTT  450

seq1  AACTCTAGGAACTTTTGGAACTTGGATCATGGAGAAGTCAGGGCAGGTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTAGGAACTTTTGGAACTTGGATCATGGAGAAGTCAGGGCAGGTTT  500

seq1  GGAAATAGACTGGTGTTTCTTGGTTTCTATCATAACATTTGTATATTCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATAGACTGGTGTTTCTTGGTTTCTATCATAACATTTGTATATTCAA  550

seq1  ATTAATCTTGTTAGATTTTTTTTAATACAAAGATCTGTTGGAAGAAAAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATCTTGTTAGATTTTTTTTAATACAAAGATCTGTTGGAAGAAAAGG  600

seq1  AGAATATCATGTGTTTTCATTTCATTTCATTTTGAGATCATATTTACTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATATCATGTGTTTTCATTTCATTTCATTTTGAGATCATATTTACTTT  650

seq1  TATTTTGTGTGCGTAAGTGTCTGCTTGAATGTGCTTATAATGTCTGTGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTGTGTGCGTAAGTGTCTGCTTGAATGTGCTTATAATGTCTGTGCA  700

seq1  ATAGGTGCTTGTAATGCCTGCAGAGGCCAAAAGATAAAATCAGGTCCCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGTGCTTGTAATGCCTGCAGAGGCCAAAAGATAAAATCAGGTCCCTG  750

seq1  GGACGGAGTGCAAATACTGGAAGGCTCCATGTAGGTACTGTGAACCAAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACGGAGTGCAAATACTGGAAGGCTCCATGTAGGTACTGTGAACCAAAC  800

seq1  CTGGCTCCTCCGGAAGAGCCACCAGGGTTCTTAATAGCTAGTCATCTCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTCCTCCGGAAGAGCCACCAGGGTTCTTAATAGCTAGTCATCTCTC  850

seq1  CAGCCCTAAATCATATTTTTTAAGTACAGTTGGCTAGAGTAAGCCTTTAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCTAAATCATATTTTTTAAGTACAGTTGGCTAGAGTAAGCCTTTAG  900

seq1  CTGTCTCTTTGTTGGTATTTGAGCATATGAAGCAGATCATAATCAAGGAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTCTTTGTTGGTATTTGAGCATATGAAGCAGATCATAATCAAGGAG  950

seq1  TCATTAGATTTCTTTGACAGGTGGCAATAAGAGTCCAATTCAGCTTGCTA  1000
      |||||||||||||||||||||| ||||| |||||||||||||||||||||
seq2  TCATTAGATTTCTTTGACAGGT-GCAAT-AGAGTCCAATTCAGCTTGCTA  998

seq1  CTTGTTAATTTATCTATAAAGCATGGTCACATTTGTCATTATTGACAATC  1050
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CTTGTTAATTTATCTATAAAGCATGGTCACATTTGTCATTATTGAC-ATC  1047

seq1  ATGACAATTGGTCTGGGTTCT  1071
      ||||| |||||||||||||||
seq2  ATGACCATTGGTCTGGGTTCT  1068

seq1: chr14_22355208_22356280
seq2: B6Ng01-028P15.g_68_1124 (reverse)

seq1  AAGGCATCAGGTTCTGTTAATAAGGCTAGCAACATACTATATATAGTCTG  50
      |||||||||||||| ||  || | |||||| ||| |||||||| ||||||
seq2  AAGGCATCAGGTTC-GT--ATTAAGCTAGC-ACA-ACTATATA-AGTCTG  44

seq1  CCCTTACATACCATGTCTCTGATTATTTTGCCACTCAAACCCCTTCCCCC  100
       |||  ||||||||||||||||||||||   |||||||||||||| ||||
seq2  -CCTACCATACCATGTCTCTGATTATTT--GCACTCAAACCCCTT-CCCC  90

seq1  ATGAAGAAAAGAACTTGCATGAATGCAAGTTGTTGTGTTAGTTGCTGGTT  150
      ||| |||||| |||||||||||||||||||||||||| ||||||||||||
seq2  ATG-AGAAAA-AACTTGCATGAATGCAAGTTGTTGTG-TAGTTGCTGGTT  137

seq1  TATTTAGAAACAGCTTGACACATATTTTTCAAACTTGAATGGTTTTTGGA  200
      ||||||||||||||||||||||||||||   ||||||||||| |||||||
seq2  TATTTAGAAACAGCTTGACACATATTTT--CAACTTGAATGG-TTTTGGA  184

seq1  GGTTGTATTTAGGGTGATCAGGAGACATGTGTCATGTTTTCTGATATGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTATTTAGGGTGATCAGGAGACATGTGTCATGTTTTCTGATATGCT  234

seq1  GTCAGAGTTAATGCACATAGATTTTAAGCACAGGCCTGAAATTGAAATTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGAGTTAATGCACATAGATTTTAAGCACAGGCCTGAAATTGAAATTC  284

seq1  CCAAGGGCAGAATTTGGTTTGCGTGTTAGAATTGGTGATGTTTCAATTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGGGCAGAATTTGGTTTGCGTGTTAGAATTGGTGATGTTTCAATTTG  334

seq1  TCTTCTCCACGTCTTAATTAGGGTGAGTGGCAGAGTCTTTGGATGCTCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTCCACGTCTTAATTAGGGTGAGTGGCAGAGTCTTTGGATGCTCAG  384

seq1  TGCTGTCTCCCCATCTGATAACAGCCACTTGTAAATTGATCCATTTGATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTCTCCCCATCTGATAACAGCCACTTGTAAATTGATCCATTTGATA  434

seq1  GTTTTGTTGAAGATCAATTGTTTGTTGAAAGAGATCATTTCAGCTGCTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTTGAAGATCAATTGTTTGTTGAAAGAGATCATTTCAGCTGCTAT  484

seq1  TTCTTTTCTTTCTTTTTTTTTTTTTTTCCCCTTGGTTTTTTTCAAGACAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTCTTTCTTTTTTTTTTTTTTTCCCCTTGGTTTTTTTCAAGACAG  534

seq1  GGTTTCTCTGTGTAGCCCTGGATGTCTTGGAACTCACTTTGTAGATTAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTCTCTGTGTAGCCCTGGATGTCTTGGAACTCACTTTGTAGATTAGG  584

seq1  CTGGCTTCAAACTCAGAAATCCGCCTCCCAGTGCTGGGATTAAAGGTGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTTCAAACTCAGAAATCCGCCTCCCAGTGCTGGGATTAAAGGTGTG  634

seq1  CGCCACCACCACCAGGTTTATTTGTCCTTTTCTTATGGAGATCATTTTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCACCACCACCAGGTTTATTTGTCCTTTTCTTATGGAGATCATTTTGA  684

seq1  TCGTCTCCCACTCCTGCTCCTGTTTGCTTGTTCAGACTTGCTCTGTGCGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTCTCCCACTCCTGCTCCTGTTTGCTTGTTCAGACTTGCTCTGTGCGC  734

seq1  AGTCCTCTCGTTGTTCCTTCTCAGGGCCCCACCGTTCTCTTCTCCCATAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTCTCGTTGTTCCTTCTCAGGGCCCCACCGTTCTCTTCTCCCATAG  784

seq1  AGCCTCTTTATTCTTCCCTCGCGTGTACTAACCCATGTAATGCTCCATAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCTTTATTCTTCCCTCGCGTGTACTAACCCATGTAATGCTCCATAC  834

seq1  AGCAAAGTGTTTGCAAGTAACTCCATGTTCTGGAACCTGTGCTGCAAGTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAGTGTTTGCAAGTAACTCCATGTTCTGGAACCTGTGCTGCAAGTA  884

seq1  AGCAAGCCATGCTGCAGTTGCCAATAAATGGTCTGCACCAAGCACACTGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGCCATGCTGCAGTTGCCAATAAATGGTCTGCACCAAGCACACTGT  934

seq1  TGTAGAGAAGCTGACACTAAAGTTAGCGAGGGCTGCAGTCCTCAGGCCAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGAGAAGCTGACACTAAAGTTAGCGAGGGCTGCAGTCCTCAGGCCAT  984

seq1  GCAGCACATGACCTTCATGTCCTAGCAAAACTTTGGATGTTATTTTTGGA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCACATGACCTTCATGTCCTAGCAAAACTTTGGATGTTATTTTTGGA  1034

seq1  AGTCTCCAAGCCTCCCAGAATTC  1073
      |||||||||||||||||||||||
seq2  AGTCTCCAAGCCTCCCAGAATTC  1057