BAC Information

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BAC

Clone NameB6Ng01-029L08
Chromosome14 (Build37)
Map Location 81,178,480 - 81,179,458
singlet/doubletsinglet
Overlap genenone
Upstream geneEG629734, Olfm4, LOC672828
Downstream geneLOC639207
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-029L08.b
ACCDH859833
length960
definitionDH859833|Mus musculus domesticus DNA, BAC clone: B6Ng01-029L08, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatgtcaccagcactctctttcaattttatattcattgtttccag
atataagactacatacaccagataccaattcaatggcaacactgacctgc
ttgcactgtcatcgatatcacatctattagaataccaccaaaattataaa
gcaattgacggaatagagggagcggtatcattggagtccatgccctcctg
tccttgcattatattgcacctataatggcttggctcgcagctacaagctt
ggggccatcactcactctttgtttatttgcttcattttaatgaatgccag
aactgaaggggattttatatgcctaggactgaaagcactgtgcctgctta
atggaatcatacaaagtctggaggattcatgaccctgatttttagatgag
tgaaacacagaggggaagaggaacagatacaagtttttgtgcatgcatgt
gggcacctgttttttattctttattttttgaatgaagctgaataaaataa
gaaaagacattagcttttggttctctgtgttgctttgtactttaaatacc
tgttttggtagttaacacgcagcagttaaagagcttgcaataaatacaga
aaagaaaacaagtatgacgcatttctaagcactgtttttcataggtctgg
gccaattgctgctctcttaagtatttgcatacaaatgcactgactcacag
tgtattgaacatgtcagagtgtggagttttgataagtaaaaaaaaaaaat
ctcaaataaacctgacgcttaggtatgaacaaaaatgtcattctctgtgt
agctcaaatttaatacattctttgcggtatacacagagctgtaatcataa
taaatcccaggaccttatgctgaatatttaaatggtaagtaatgggggtc
gtatctcaagaaaaaaagcaaaataaagcaagattcctacaaactggaaa
gagtactatt
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_81178480_81179458
seq2: B6Ng01-029L08.b_39_998 (reverse)

seq1  AATAGTAACTCTTTCCAGGTTTTGTAGGAAATCTTTAGCTTTTATATTTG  50
      |||||| |||||||||||  |||||||| ||||||  || ||||| ||||
seq2  AATAGT-ACTCTTTCCAG--TTTGTAGG-AATCTT--GC-TTTAT-TTTG  42

seq1  CTTTTTTTTCTTTAGATACGACCCCCATTAACATTACCATTTTAAATATT  100
      | |||||||||| |||||||||||||||||   |||||| |||||||| |
seq2  C-TTTTTTTCTTGAGATACGACCCCCATTA--CTTACCA-TTTAAATA-T  87

seq1  TCAGCATAAGGGTCCTGGGATTTAATATTGATTTACAGCTCTGTGTATAC  150
      ||||||||| |||||||||||||| || ||| ||||||||||||||||||
seq2  TCAGCATAA-GGTCCTGGGATTTATTA-TGA-TTACAGCTCTGTGTATAC  134

seq1  CGCAAAGAATGTATTAAAATTGAGCTACAAAGAGAATGACATTTTTGTTC  200
      |||||||||||||||||| |||||||||| ||||||||||||||||||||
seq2  CGCAAAGAATGTATTAAATTTGAGCTACACAGAGAATGACATTTTTGTTC  184

seq1  ATACCTAAGCGTCAGGTTTATTTGAGATTTTTTTTTTTTACTTATCAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCTAAGCGTCAGGTTTATTTGAGATTTTTTTTTTTTACTTATCAAAA  234

seq1  CTCCACACTCTGACATGTTCAATACACTGTGAGTCAGTGCATTTGTATGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACACTCTGACATGTTCAATACACTGTGAGTCAGTGCATTTGTATGC  284

seq1  AAATACTTAAGAGAGCAGCAACTGGCCCAGACCTATGAAAAACAGTGCTT  350
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AAATACTTAAGAGAGCAGCAATTGGCCCAGACCTATGAAAAACAGTGCTT  334

seq1  AGAAATGCGTCATACTTGTTTTCTTTTCTGTATTTATTGCAAGCTCTTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGCGTCATACTTGTTTTCTTTTCTGTATTTATTGCAAGCTCTTTA  384

seq1  ACTGCTGCGTGTTAACTACCAAAACAGGTATTTAAAGTACAAAGCAACAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTGCGTGTTAACTACCAAAACAGGTATTTAAAGTACAAAGCAACAC  434

seq1  AGAGAACCAAAAGCTAATGTCTTTTCTTATTTTATTCAGCTTCATTCAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAACCAAAAGCTAATGTCTTTTCTTATTTTATTCAGCTTCATTCAAA  484

seq1  AAATAAAGAATAAAAAACAGGTGCCCACATGCATGCACAAAAACTTGTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAAGAATAAAAAACAGGTGCCCACATGCATGCACAAAAACTTGTAT  534

seq1  CTGTTCCTCTTCCCCTCTGTGTTTCACTCATCTAAAAATCAGGGTCATGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCCTCTTCCCCTCTGTGTTTCACTCATCTAAAAATCAGGGTCATGA  584

seq1  ATCCTCCAGACTTTGTATGATTCCATTAAGCAGGCACAGTGCTTTCAGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCCAGACTTTGTATGATTCCATTAAGCAGGCACAGTGCTTTCAGTC  634

seq1  CTAGGCATATAAAATCCCCTTCAGTTCTGGCATTCATTAAAATGAAGCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGCATATAAAATCCCCTTCAGTTCTGGCATTCATTAAAATGAAGCAA  684

seq1  ATAAACAAAGAGTGAGTGATGGCCCCAAGCTTGTAGCTGCGAGCCAAGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACAAAGAGTGAGTGATGGCCCCAAGCTTGTAGCTGCGAGCCAAGCC  734

seq1  ATTATAGGTGCAATATAATGCAAGGACAGGAGGGCATGGACTCCAATGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAGGTGCAATATAATGCAAGGACAGGAGGGCATGGACTCCAATGAT  784

seq1  ACCGCTCCCTCTATTCCGTCAATTGCTTTATAATTTTGGTGGTATTCTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGCTCCCTCTATTCCGTCAATTGCTTTATAATTTTGGTGGTATTCTAA  834

seq1  TAGATGTGATATCGATGACAGTGCAAGCAGGTCAGTGTTGCCATTGAATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGTGATATCGATGACAGTGCAAGCAGGTCAGTGTTGCCATTGAATT  884

seq1  GGTATCTGGTGTATGTAGTTTTATATCTGGAAACAATGAATATAAAATTT  950
      ||||||||||||||||||| ||||||||||||||||||||||||||| ||
seq2  GGTATCTGGTGTATGTAGTCTTATATCTGGAAACAATGAATATAAAA-TT  933

seq1  GAAAGAGAGTGCTGGTTGACATTGAATTC  979
      ||||||||||||||| ||||| |||||||
seq2  GAAAGAGAGTGCTGG-TGACA-TGAATTC  960