BAC Information

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BAC

Clone NameB6Ng01-030I18
Chromosome14 (Build37)
Map Location 76,754,828 - 76,916,105
singlet/doubletdoublet
Overlap geneTsc22d1
Upstream geneGm912, Spert, 4930564B18Rik, Cog3, Slc25a30, LOC100043189, Tpt1, LOC100038852, Gtf2f2, LOC668504, Kctd4, 1200011I18Rik, Nufip1, LOC100043752, 2900040C04Rik
Downstream gene2810032E02Rik, LOC100043753, LOC100043201, 9030625A04Rik, Ccdc122, D230005D02Rik, LOC100043755, LOC676171, EG629678
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-030I18.bB6Ng01-030I18.g
ACCDH860419DH860420
length836616
definitionDH860419|Mus musculus domesticus DNA, BAC clone: B6Ng01-030I18, 5' end.DH860420|Mus musculus domesticus DNA, BAC clone: B6Ng01-030I18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,754,828 - 76,755,665)(76,915,491 - 76,916,105)
sequence
gaattctaaaacggactcaggaggaggctccagaacaattttattagttt
gacaaaatcaacaacaacaaccagaccatccatcagtcaggcgggctata
aatctcagcaactgtaaggaggagggagatgaaaagggggaggagagaaa
gctatgcctttgaggtagggtctgagaaagcaagcctagtcaagctgggg
aggtcagaagcagcagatgggccaaggggctgctgagagaaagcccacct
gccgggtgggtgtcttagtgttacagagagtgcacttggacttttgagca
aaggtgacaaaggaaaagggaaaatttgctgcggggtgagctttacccct
tattcgaaggattttgtgttccaaaacaaaggaatacatcagggttgcac
ggttagaaacagacactgggactgtttatttgaaaaggaaagcattcctg
agaagaggcgtaggctggtgaggtgagggagacgtgagtggaggccacag
ggtaacgcccctttgtctgcagattacagagcacctgcctctcctatttg
ttttgtattcttcttgtttttagtggtttgagacagagtctcactatgta
cgtctggctggtctggatttgttcttgtggaccaggctagccctgaaatc
actgtgacctgcctgccctgtctctgggattttgctgggctgaaaggcct
ggccttctcctattcatatcgcacatgtttttcttgcttcatgctctggt
tgttagatgaagtccagcagaaagtttgcagtcttcctctgcaaactggc
ttcttgctaacgttaatcttgcttttcacactcccg
gaattccagacatctgaccttatcagcggtgcccctgcgctccttgcctg
gagttgtctggaccctgacaaacacttcaaagcctaccacccttgcctct
cccggagtgaaggaggttgtcttggtgttccatcgctgtgaagagacacg
gtggccacggcagtgcttataaaagaaagcatttagttcaggcctgctta
ccgtttcagagggatttagtccctttatccccatgacagggaacatggcg
gcacgcagctggagaagtagctagtgttcttcagccagttctgagggagc
gcggcaggaagagaaagaccctggccagggtctagcttttgaaacttcaa
tgacccattcccagggacatttccttcaataaggccacaccaacaaggtc
acgccttctatctcttcccaggtaatgccactccctgatgagtaagcatt
caattacgctggagccattctcattcaaacctccacggggtggagaggaa
ggtatttggggtggtctgaaggcaggaaaacctcctcatccagccacaat
ggaaagcctgggatgagtgtccttgcaaactgggagagggagctctctgc
atgttcacccagactt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_76754828_76755665
seq2: B6Ng01-030I18.b_42_877

seq1  GAATTCTAAAACGGACTCAGGAGGAGGCTCCAGAACAATTTTATTAGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAAACGGACTCAGGAGGAGGCTCCAGAACAATTTTATTAGTTT  50

seq1  GACAAAATCAACAACAACAACCAGACCATCCATCAGTCAGGCGGGCTATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAAATCAACAACAACAACCAGACCATCCATCAGTCAGGCGGGCTATA  100

seq1  AATCTCAGCAACTGTAAGGAGGAGGGAGATGAAAAGGGGGAGGAGAGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCAGCAACTGTAAGGAGGAGGGAGATGAAAAGGGGGAGGAGAGAAA  150

seq1  GCTATGCCTTTGAGGTAGGGTCTGAGAAAGCAAGCCTAGTCAAGCTGGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATGCCTTTGAGGTAGGGTCTGAGAAAGCAAGCCTAGTCAAGCTGGGG  200

seq1  AGGTCAGAAGCAGCAGATGGGCCAAGGGGCTGCTGAGAGAAAGCCCACCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCAGAAGCAGCAGATGGGCCAAGGGGCTGCTGAGAGAAAGCCCACCT  250

seq1  GCCGGGTGGGTGTCTTAGTGTTACAGAGAGTGCACTTGGACTTTTGAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGGGTGGGTGTCTTAGTGTTACAGAGAGTGCACTTGGACTTTTGAGCA  300

seq1  AAGGTGACAAAGGAAAAGGGAAAATTTGCTGCGGGGTGAGCTTTACCCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTGACAAAGGAAAAGGGAAAATTTGCTGCGGGGTGAGCTTTACCCCT  350

seq1  TATTCGAAGGATTTTGTGTTCCAAAACAAAGGAATACATCAGGGTTGCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCGAAGGATTTTGTGTTCCAAAACAAAGGAATACATCAGGGTTGCAC  400

seq1  GGTTAGAAACAGACACTGGGACTGTTTATTTGAAAAGGAAAGCATTCCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAGAAACAGACACTGGGACTGTTTATTTGAAAAGGAAAGCATTCCTG  450

seq1  AGAAGAGGCGTAGGCTGGTGAGGTGAGGGAGACGTGAGTGGAGGCCACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAGGCGTAGGCTGGTGAGGTGAGGGAGACGTGAGTGGAGGCCACAG  500

seq1  GGTAACGCCCCTTTGTCTGCAGATTACAGAGCACCTGCCTCTCCTATTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAACGCCCCTTTGTCTGCAGATTACAGAGCACCTGCCTCTCCTATTTG  550

seq1  TTTTGTATTCTTCTTGTTTTTAGTGGTTTGAGACAGAGTCTCACTATGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTATTCTTCTTGTTTTTAGTGGTTTGAGACAGAGTCTCACTATGTA  600

seq1  CGTCTGGCTGGTCTGGAATTTGTTCTTGTGGACCAGGCTAGCCCTGAAAT  650
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CGTCTGGCTGGTCTGG-ATTTGTTCTTGTGGACCAGGCTAGCCCTGAAAT  649

seq1  CACTGTGACCTGCCTGCCCTGTCTCT-GGATTTTGCTGGGCTGAAAGGCC  699
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CACTGTGACCTGCCTGCCCTGTCTCTGGGATTTTGCTGGGCTGAAAGGCC  699

seq1  TGGCCTTCTCCTATTCATATCGCACAGGTTTTTCTTGC-TCATGCTCTGG  748
      |||||||||||||||||||||||||| ||||||||||| |||||||||||
seq2  TGGCCTTCTCCTATTCATATCGCACATGTTTTTCTTGCTTCATGCTCTGG  749

seq1  TTGTTAGATGAAGTCCAGGCAGGAAAGTTTGCAGTCTTCCTCTGCAAACT  798
      ||||||||||||||||| ||| ||||||||||||||||||||||||||||
seq2  TTGTTAGATGAAGTCCA-GCA-GAAAGTTTGCAGTCTTCCTCTGCAAACT  797

seq1  GGCTTCTTGCTAACGTTAATCTTGCTGTTCCACACTCCCG  838
      |||||||||||||||||||||||||| || ||||||||||
seq2  GGCTTCTTGCTAACGTTAATCTTGCT-TTTCACACTCCCG  836

seq1: chr14_76915491_76916105
seq2: B6Ng01-030I18.g_67_682 (reverse)

seq1  AAGTCTGGGTGAACATGCAGAGAGCTCCCTCTCCCAGTTTGCAAGGACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTGGGTGAACATGCAGAGAGCTCCCTCTCCCAGTTTGCAAGGACAC  50

seq1  TCATCCCAGGC-TTCCATTGTGGCTGGATGAGGAGGTTTTCCTGCCTTCA  99
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TCATCCCAGGCTTTCCATTGTGGCTGGATGAGGAGGTTTTCCTGCCTTCA  100

seq1  GACCACCCCAAATACCTTCCTCTCCACCCCGTGGAGGTTTGAATGAGAAT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCACCCCAAATACCTTCCTCTCCACCCCGTGGAGGTTTGAATGAGAAT  150

seq1  GGCTCCAGCGTAATTGAATGCTTACTCATCAGGGAGTGGCATTACCTGGG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCCAGCGTAATTGAATGCTTACTCATCAGGGAGTGGCATTACCTGGG  200

seq1  AAGAGATAGAAGGCGTGACCTTGTTGGTGTGGCCTTATTGAAGGAAATGT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGATAGAAGGCGTGACCTTGTTGGTGTGGCCTTATTGAAGGAAATGT  250

seq1  CCCTGGGAATGGGTCATTGAAGTTTCAAAAGCTAGACCCTGGCCAGGGTC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGGAATGGGTCATTGAAGTTTCAAAAGCTAGACCCTGGCCAGGGTC  300

seq1  TTTCTCTTCCTGCCGCGCTCCCTCAGAACTGGCTGAAGAACACTAGCTAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTTCCTGCCGCGCTCCCTCAGAACTGGCTGAAGAACACTAGCTAC  350

seq1  TTCTCCAGCTGCGTGCCGCCATGTTCCCTGTCATGGGGATAAAGGGACTA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCAGCTGCGTGCCGCCATGTTCCCTGTCATGGGGATAAAGGGACTA  400

seq1  AATCCCTCTGAAACGGTAAGCAGGCCTGAACTAAATGCTTTCTTTTATAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCCTCTGAAACGGTAAGCAGGCCTGAACTAAATGCTTTCTTTTATAA  450

seq1  GCACTGCCGTGGCCACCGTGTCTCTTCACAGCGATGGAACACCAAGACAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGCCGTGGCCACCGTGTCTCTTCACAGCGATGGAACACCAAGACAA  500

seq1  CCTCCTTCACTCCGGGAGAGGCAAGGGTGGTAGGCTTTGAAGTGTTTGTC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTTCACTCCGGGAGAGGCAAGGGTGGTAGGCTTTGAAGTGTTTGTC  550

seq1  AGGGTCCAGACAACTCCAGGCAAGGAGCGCAGGGGCACCGCTGATAAGGT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTCCAGACAACTCCAGGCAAGGAGCGCAGGGGCACCGCTGATAAGGT  600

seq1  CAGATGTCTGGAATTC  615
      ||||||||||||||||
seq2  CAGATGTCTGGAATTC  616