BAC Information

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BAC

Clone NameB6Ng01-031I03
Chromosome14 (Build37)
Map Location 108,065,840 - 108,169,582
singlet/doubletdoublet
Overlap geneLOC668752, EG668754
Upstream genenone
Downstream geneLOC668757, EG668761
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-031I03.bB6Ng01-031I03.g
ACCDH861099DH861100
length8661,078
definitionDH861099|Mus musculus domesticus DNA, BAC clone: B6Ng01-031I03, 5' end.DH861100|Mus musculus domesticus DNA, BAC clone: B6Ng01-031I03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(108,065,840 - 108,066,606)(108,168,482 - 108,169,582)
sequence
gaattcccaagatacagttcaaaaaagcttttgtattctaagtttttggg
ctaatatccacttatcagtgagtgtataccatgtgtgttcttttgcgatt
gggttacctcacaggatgatattttctagttccatcaatgtgcctaagaa
tttcatgaattcattgatttttcttttcttttctttggtttttttttttt
ttttggtagaacaagaatttaatattttcactgttgatattcaacataca
ggatagttatttaagacaaactttgttgttatgcctcccttttcattttt
gattttattaatttagttactgtctctatgtcctttggttagactttgta
tgggttcatttaatttgattttctcaaaggacaagctcctagttttgttg
attctttttatatagttctttttgtttccatttggtttgattatttccta
ccatctactccttttgggtgtatttgcttcattttgttctagagcttcta
ggtgtactgtcaaactgctagtacaagctccctttagttcctttttggag
gcacctagagctatgagttttcctcctaccactgcttttttaaccaatgt
ttcggtatggtatgtcttcattttaactaaattctgaaaagcctttaatt
tcttactttatttcttctttgaccaagttatcattgagtagaacattgtt
cagcttccatgtgtatgtgtgcttactgttgttattgttggtatttaaga
ccagccttagtccattttgatctgatagggtgcaagggattattttaatt
atcttttatctgttgaggcctgttttttgaacaattatatgctcagtttt
gtagaatgcaccatga
gaattcatattttaataattgtgtgactgaatatacatgcatatgtacat
atatatgaatatatgtatatatattttatgacagtctcacaatttagcac
aaaatagtaaaattatgctttgaaaatgaaatggaatataatttagcaac
atagcatttattgaattctgaatacattatagatcatttaattctaccag
tatttgaataaaagaaagtaaagcatgaacatctatactataaaaataaa
atttagaggtaatgattgagcttatttgcaatataatttcatcagggtca
ttttttgttgaatcaaaatatagcaatctgaagtgttttttcctaataat
tcttaaagcaattatgaataaccagaaacactaatatttaagaacattta
acaatgtcctggtatcagaaatatacttaaaaatatacatgcattatatt
tctcctattgaattaaagaggacagtgtgggtacagtatgcataaataag
agaggttagggtagaaatcaagaaagacaatttcaaatatttctttattc
tgagtgattcatgaaatgaaatagagcactttaaatattatagaaacaaa
atgcagagaaaaatagtataagaaattactgtcaaactcagtgagcaaaa
tatgaacagatgttagcaaagtgttgtcatcatttataaaaggaaaaacc
tgatgtgtttccccttcgttggccatataaataattcagatatttgttat
tctctgctttataaagttctcactgttttctttaactgtcccgagtcttc
ctcctactgcatttctatatttgttgtactcctacttgataaaccatgct
ggctcccacagtaccttttctgtctttgtgtgttagcgagtttgctgctg
tccatgctttctcctttgtgcatgtaaatcatttagagatattgtgtttt
cctaggctctaactgagtaggctggaaaaagccacctcagtttaaccaaa
tactcagatcaatcatgccccttaattccaagcttgctaccaggtgatca
atcaagttgggtcttttctgggatgttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_108065840_108066606
seq2: B6Ng01-031I03.b_44_810

seq1  GAATTCCCAAGATACAGTTCAAAAAAGCTTTTGTATTCTAAGTTTTTGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCAAGATACAGTTCAAAAAAGCTTTTGTATTCTAAGTTTTTGGG  50

seq1  CTAATATCCACTTATCAGTGAGTGTATACCATGTGTGTTCTTTTGCGATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATATCCACTTATCAGTGAGTGTATACCATGTGTGTTCTTTTGCGATT  100

seq1  GGGTTACCTCACAGGATGATATTTTCTAGTTCCATCAATGTGCCTAAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTACCTCACAGGATGATATTTTCTAGTTCCATCAATGTGCCTAAGAA  150

seq1  TTTCATGAATTCATTGATTTTTCTTTTCTTTTCTTTGGTTTTTTTTTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATGAATTCATTGATTTTTCTTTTCTTTTCTTTGGTTTTTTTTTTTT  200

seq1  TTTTGGTAGAACAAGAATTTAATATTTTCACTGTTGATATTCAACATACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGTAGAACAAGAATTTAATATTTTCACTGTTGATATTCAACATACA  250

seq1  GGATAGTTATTTAAGACAAACTTTGTTGTTATGCCTCCCTTTTCATTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAGTTATTTAAGACAAACTTTGTTGTTATGCCTCCCTTTTCATTTTT  300

seq1  GATTTTATTAATTTAGTTACTGTCTCTATGTCCTTTGGTTAGACTTTGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTATTAATTTAGTTACTGTCTCTATGTCCTTTGGTTAGACTTTGTA  350

seq1  TGGGTTCATTTAATTTGATTTTCTCAAAGGACAAGCTCCTAGTTTTGTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTCATTTAATTTGATTTTCTCAAAGGACAAGCTCCTAGTTTTGTTG  400

seq1  ATTCTTTTTATATAGTTCTTTTTGTTTCCATTTGGTTTGATTATTTCCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTTTTATATAGTTCTTTTTGTTTCCATTTGGTTTGATTATTTCCTA  450

seq1  CCATCTACTCCTTTTGGGTGTATTTGCTTCATTTTGTTCTAGAGCTTCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTACTCCTTTTGGGTGTATTTGCTTCATTTTGTTCTAGAGCTTCTA  500

seq1  GGTGTACTGTCAAACTGCTAGTACAAGCTCCCTTTAGTTCCTTTTTGGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTACTGTCAAACTGCTAGTACAAGCTCCCTTTAGTTCCTTTTTGGAG  550

seq1  GCACCTAGAGCTATGAGTTTTCCTCCTACCACTGCTTTTTTAACCAATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCTAGAGCTATGAGTTTTCCTCCTACCACTGCTTTTTTAACCAATGT  600

seq1  TTCGGTATGGTATGTCTTCATTTTAACTAAATTCTGAAAAGCCTTTAATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGGTATGGTATGTCTTCATTTTAACTAAATTCTGAAAAGCCTTTAATT  650

seq1  TCTTACTTTATTTCTTCTTTGACCAAGTTATCATTGAGTAGAACATTGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTACTTTATTTCTTCTTTGACCAAGTTATCATTGAGTAGAACATTGTT  700

seq1  CAGCTTCCATGTGTATGTGTGCTTACTGTTGTTATTGTTGGTATTTAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTCCATGTGTATGTGTGCTTACTGTTGTTATTGTTGGTATTTAAGA  750

seq1  CCAGCCTTAGTCCATTT  767
      |||||||||||||||||
seq2  CCAGCCTTAGTCCATTT  767

seq1: chr14_108168482_108169582
seq2: B6Ng01-031I03.g_66_1143 (reverse)

seq1  AAACATCCCAGAAAAAAGAACACAAACTCTAATTTAATACACACTTGTGG  50
      ||||||||||||||| |     | |||| | ||| |  ||       |||
seq2  AAACATCCCAGAAAAGA----CCCAACT-TGATTGATCAC------CTGG  39

seq1  TATGCAAAAGCTTGGAATTTAAGGGGGCATGATTGAATCTTGAGTATTTG  100
      || ||  ||||||||||||  | |||||||||||| ||| ||||||||||
seq2  TA-GC--AAGCTTGGAATT--AAGGGGCATGATTG-ATC-TGAGTATTTG  82

seq1  GTTAAAACTGAGTTGGCTGTTTTCCAGCCTACCTCAGTTTAGAGCCTAGG  150
      ||| |||||||| ||||| |||||||||||| ||||| ||||||||||||
seq2  GTT-AAACTGAGGTGGCT-TTTTCCAGCCTA-CTCAG-TTAGAGCCTAGG  128

seq1  AAAACACAATATCTCTAAATGATTTTACATGCACAAAGGAGAAAGCATGG  200
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AAAACACAATATCTCTAAATGA-TTTACATGCACAAAGGAGAAAGCATGG  177

seq1  ACAGCAGCAAACTCGCTAACACACAAAGACAGAAAAGGTACTGTGGGAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAGCAAACTCGCTAACACACAAAGACAGAAAAGGTACTGTGGGAGC  227

seq1  CAGCATGGTTTATCAAGTAGGAGTACAACAAATATAGAAATGCAGTAGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATGGTTTATCAAGTAGGAGTACAACAAATATAGAAATGCAGTAGGA  277

seq1  GGAAGACTCGGGACAGTTAAAGAAAACAGTGAGAACTTTATAAAGCAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGACTCGGGACAGTTAAAGAAAACAGTGAGAACTTTATAAAGCAGAG  327

seq1  AATAACAAATATCTGAATTATTTATATGGCCAACGAAGGGGAAACACATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACAAATATCTGAATTATTTATATGGCCAACGAAGGGGAAACACATC  377

seq1  AGGTTTTTCCTTTTATAAATGATGACAACACTTTGCTAACATCTGTTCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTTTCCTTTTATAAATGATGACAACACTTTGCTAACATCTGTTCAT  427

seq1  ATTTTGCTCACTGAGTTTGACAGTAATTTCTTATACTATTTTTCTCTGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGCTCACTGAGTTTGACAGTAATTTCTTATACTATTTTTCTCTGCA  477

seq1  TTTTGTTTCTATAATATTTAAAGTGCTCTATTTCATTTCATGAATCACTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTCTATAATATTTAAAGTGCTCTATTTCATTTCATGAATCACTC  527

seq1  AGAATAAAGAAATATTTGAAATTGTCTTTCTTGATTTCTACCCTAACCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAAAGAAATATTTGAAATTGTCTTTCTTGATTTCTACCCTAACCTC  577

seq1  TCTTATTTATGCATACTGTACCCACACTGTCCTCTTTAATTCAATAGGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATTTATGCATACTGTACCCACACTGTCCTCTTTAATTCAATAGGAG  627

seq1  AAATATAATGCATGTATATTTTTAAGTATATTTCTGATACCAGGACATTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATAATGCATGTATATTTTTAAGTATATTTCTGATACCAGGACATTG  677

seq1  TTAAATGTTCTTAAATATTAGTGTTTCTGGTTATTCATAATTGCTTTAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATGTTCTTAAATATTAGTGTTTCTGGTTATTCATAATTGCTTTAAG  727

seq1  AATTATTAGGAAAAAACACTTCAGATTGCTATATTTTGATTCAACAAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATTAGGAAAAAACACTTCAGATTGCTATATTTTGATTCAACAAAAA  777

seq1  ATGACCCTGATGAAATTATATTGCAAATAAGCTCAATCATTACCTCTAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACCCTGATGAAATTATATTGCAAATAAGCTCAATCATTACCTCTAAA  827

seq1  TTTTATTTTTATAGTATAGATGTTCATGCTTTACTTTCTTTTATTCAAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTTTATAGTATAGATGTTCATGCTTTACTTTCTTTTATTCAAAT  877

seq1  ACTGGTAGAATTAAATGATCTATAATGTATTCAGAATTCAATAAATGCTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTAGAATTAAATGATCTATAATGTATTCAGAATTCAATAAATGCTA  927

seq1  TGTTGCTAAATTATATTCCATTTCATTTTCAAAGCATAATTTTACTATTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCTAAATTATATTCCATTTCATTTTCAAAGCATAATTTTACTATTT  977

seq1  TGTGCTAAATTGTGAGACTGTCATAAAATATATATACATATATTCATATA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTAAATTGTGAGACTGTCATAAAATATATATACATATATTCATATA  1027

seq1  TATGTACATATGCATGTATATTCAGTCACACAATTATTAAAATATGAATT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTACATATGCATGTATATTCAGTCACACAATTATTAAAATATGAATT  1077

seq1  C  1101
      |
seq2  C  1078