BAC Information

Click to search

BAC

Clone NameB6Ng01-031K20
Chromosome14 (Build37)
Map Location 85,957,751 - 86,124,431
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC629794, LOC668603
Downstream geneLOC100043301, EG629815, LOC100043306, LOC100043778, LOC100043310, LOC100043311, Diap3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-031K20.bB6Ng01-031K20.g
ACCDH861223DH861224
length1,0661,005
definitionDH861223|Mus musculus domesticus DNA, BAC clone: B6Ng01-031K20, 5' end.DH861224|Mus musculus domesticus DNA, BAC clone: B6Ng01-031K20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(85,957,751 - 85,958,834)(86,123,422 - 86,124,431)
sequence
gaattcaaagcttacctagtgtctttggttgaatggagggaaagtttaaa
tgaaggcaataggacattttttttctctctctgccaagcattgtgatttt
atcacatatattatgctggtcacttagaaaacaaacaaaattgcattcag
tttagttctaaatggtggcttagaaataaaaaataacaccagatggataa
aataaaattgaatttctagtatattgcaaacaagcttaaatactgtgttc
agcttccatgtggagtatgatttgaagtgaaagagtgttttgtgactaga
acactttccattcattcaatatcacagatgaattttaaagctataatata
tcaatgagagtttactcgatgcaggtaacttgaaggaattccccaatatt
aaagagccttcatattctttggtcaacattgtcttagggttattattgct
gtggtgaaacatcatgacccaaagcaagatgggaagtaaagggtttattt
tgtttatacatgtatattcatcatatacttgcagatcatcatcatcttag
gaagttagggcagaaactcaaactatgcaggcacctggaggcagaagtag
acatagagcccatggaggagtattgcttactggagtgcctctaatgcctg
cctgctaacaaaacccagcactaccagtccttgtgtgctctatccagaac
aggctggtctattccccatcaatcaccaattaacaaaatgctctaaaggt
ttgcctgttcacacccaatcttttgaaagcattttctcaattgaagttct
gtcctatcacatgactagagtttgtgtcatgttgacataaaactagccag
cacgaacatcttacattatttccaggcttatgggatatactactattttg
caaagattttagtcttcattattttctggaaagttgactctatagaaaga
tgcatctatgttacacttttcaaatttcctttcagtataacttatataat
ttcccatggttcttctatatcagtgcacgtgtttgtaaatttatttttgc
tatgtaaatatgcatt
gaattccatgaaagaaggcacaaaaaaggagagagaatttatagaaacag
tgcctactaaaaatattcaatatgattataagagactcagctaagtgaag
caaataaggtaattcattactacttttaataattctcctttcagaagaaa
aaaacatattgaataatattcctgaaataatttagcaataaagtcacatg
gtgaaaagaaatatatatttaagcagtctttgtgttacaccagagcccac
tgtcttctgggaggtttctaaatgcaattcaatcagtagatatgtgtcac
ttgcattcattgttactttccaaatttattttagtcagcaattttatgag
taggtttacacagttaaacttagtatttcaccctggctcatttataaaga
aaaagcaaatataggcataaaatctccattcttctcatctatacaaatct
atggaataccacacattatgcaatagaaacaactaaattttacgttaata
tccaggaaatacagaaggtagttgttggtctggaaggcacaacctggaat
ataggccatccctgattatttgccttccaaagcagtatgctacctctttc
acaagttactgtttattcagtatagatcaccctatgttctagatcagcta
aatgtcagcacagcatcatgacagaagaacagaatctttccctgtaacat
gtagtcttctgtgcctaccacggatctgggtgtgtcttcctttctctcaa
tgacttactgatgacaagtaatcttagtacatgaagaattgtaaaaagac
tgagaattttagtgcctagcaatatgtctacatggtcactttcagctgcc
agagagagaacggggaactagatgacctcatttggccatgtcagttaaag
catcaggaaagaatctcagtgacagaactgaaagagtatgagttttactg
aatctaggagagataggagggaaaagaaggagagagtagagggatggaga
ggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_85957751_85958834
seq2: B6Ng01-031K20.b_46_1111

seq1  GAATTCAAAGCTTACCTAGTGTCTTTGGTTGAATGGAGGGAAAGTTTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGCTTACCTAGTGTCTTTGGTTGAATGGAGGGAAAGTTTAAA  50

seq1  TGAAGGCAATAGGACATTTTTTTTCTCTCTCTGCCAAGCATTGTGATTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGCAATAGGACATTTTTTTTCTCTCTCTGCCAAGCATTGTGATTTT  100

seq1  ATCACATATATTATGCTGGTCACTTAGAAAACAAACAAAATTGCATTCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACATATATTATGCTGGTCACTTAGAAAACAAACAAAATTGCATTCAG  150

seq1  TTTAGTTCTAAATGGTGGCTTAGAAATAAAAAATAACACCAGATGGATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTTCTAAATGGTGGCTTAGAAATAAAAAATAACACCAGATGGATAA  200

seq1  AATAAAATTGAATTTCTAGTATATTGCAAACAAGCTTAAATACTGTGTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAATTGAATTTCTAGTATATTGCAAACAAGCTTAAATACTGTGTTC  250

seq1  AGCTTCCATGTGGAGTATGATTTGAAGTGAAAGAGTGTTTTGTGACTAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCCATGTGGAGTATGATTTGAAGTGAAAGAGTGTTTTGTGACTAGA  300

seq1  ACACTTTCCATTCATTCAATATCACAGATGAATTTTAAAGCTATAATATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTTCCATTCATTCAATATCACAGATGAATTTTAAAGCTATAATATA  350

seq1  TCAATGAGAGTTTACTCGATGCAGGTAACTTGAAGGAATTCCCCAATATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGAGAGTTTACTCGATGCAGGTAACTTGAAGGAATTCCCCAATATT  400

seq1  AAAGAGCCTTCATATTCTTTGGTCAACATTGTCTTAGGGTTATTATTGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGCCTTCATATTCTTTGGTCAACATTGTCTTAGGGTTATTATTGCT  450

seq1  GTGGTGAAACATCATGACCCAAAGCAAGATGGGAAGTAAAGGGTTTATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGAAACATCATGACCCAAAGCAAGATGGGAAGTAAAGGGTTTATTT  500

seq1  TGTTTATACATGTATATTCATCATATACTTGCAGATCATCATCATCTTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTATACATGTATATTCATCATATACTTGCAGATCATCATCATCTTAG  550

seq1  GAAGTTAGGGCAGAAACTCAAACTATGCAGGCACCTGGAGGCAGAAGTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTAGGGCAGAAACTCAAACTATGCAGGCACCTGGAGGCAGAAGTAG  600

seq1  ACATAGAGCCCATGGAGGAGTATTGCTTACTGGAGTGCCTCTAATGCCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGAGCCCATGGAGGAGTATTGCTTACTGGAGTGCCTCTAATGCCTG  650

seq1  CCTGCTAACAAAACCCAGCACTACCAGTCCTTGTGTGCTCTATCCAGAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTAACAAAACCCAGCACTACCAGTCCTTGTGTGCTCTATCCAGAAC  700

seq1  AGGCTGGTCTATTCCCCATCAATCACCAATTAACAAAATGCTCTAAAGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGGTCTATTCCCCATCAATCACCAATTAACAAAATGCTCTAAAGGT  750

seq1  TTGCCTGTTCACACCCAATCTTTTGAAAGCATTTTCTCAATTGAAGTTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTGTTCACACCCAATCTTTTGAAAGCATTTTCTCAATTGAAGTTCT  800

seq1  GTCCTATCACATGACTAGAGTTTGTGTCATGTTGACATAAAACTAGCCAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTATCACATGACTAGAGTTTGTGTCATGTTGACATAAAACTAGCCAG  850

seq1  CACGAACATCTTACATTATTTCCAGGCTTATGGGATATACTACTATTTTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGAACATCTTACATTATTTCCAGGCTTATGGGATATACTACTATTTTG  900

seq1  CAAAGATTTTTAGGTCTTCATTATTTTCTGGAAAGTTGACTCTATAGAAA  950
      ||||||||||   |||||||||||||||||||||||||||||||||||||
seq2  CAAAGATTTT--AGTCTTCATTATTTTCTGGAAAGTTGACTCTATAGAAA  948

seq1  GAATTGGCATCTATGTTACACTTTTCAAATTTCCTTTCCAAGTATTAACT  1000
      ||    ||||||||||||||||||||||||||||||||  |||| |||| 
seq2  GA---TGCATCTATGTTACACTTTTCAAATTTCCTTTC--AGTA-TAAC-  991

seq1  TTATATAATTTCCCCATGGTATCTTCTATATCAGTGCACCGTGTTTTGTA  1050
      ||||||||||| |||||||| ||||||||||||||||| |||| ||||||
seq2  TTATATAATTT-CCCATGGT-TCTTCTATATCAGTGCA-CGTG-TTTGTA  1037

seq1  AATTTTATTTTTGCTATTGTAAAATAATTGCATT  1084
      || ||||||||||||| ||| |||||  ||||||
seq2  AA-TTTATTTTTGCTA-TGT-AAATA--TGCATT  1066

seq1: chr14_86123422_86124431
seq2: B6Ng01-031K20.g_65_1068 (reverse)

seq1  CCCCTCTCCATCCCTCTACCTTCTCTCCCTTCTTTTTCCTCTCTATCTCT  50
      |||||||||||||||||||  ||||| ||||||||| |||| ||||||||
seq2  CCCCTCTCCATCCCTCTAC--TCTCT-CCTTCTTTTCCCTC-CTATCTCT  46

seq1  CCTAAGATTTCAGTAAAACTCATACTCTTTCAGTTCTGTCACTGAGATTC  100
      ||| ||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CCT-AGA-TTCAGTAAAACTCATACTCTTTCAGTTCTGTCACTGAGATTC  94

seq1  TTTCCTGATGCTTTAACTGACATGGCCAAATGAGGTCATCTAGTTCCCCG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTGATGCTTTAACTGACATGGCCAAATGAGGTCATCTAGTTCCCCG  144

seq1  TTCTCTCTCTGGCAGCTGAAAGTGACCATGTAGACATATTGCTAGGCACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTCTCTGGCAGCTGAAAGTGACCATGTAGACATATTGCTAGGCACT  194

seq1  AAAATTCTCAGTCTTTTTACAATTCTTCATGTACTAAGATTACTTGTCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTCTCAGTCTTTTTACAATTCTTCATGTACTAAGATTACTTGTCAT  244

seq1  CAGTAAGTCATTGAGAGAAAGGAAGACACACCCAGATCCGTGGTAGGCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAAGTCATTGAGAGAAAGGAAGACACACCCAGATCCGTGGTAGGCAC  294

seq1  AGAAGACTACATGTTACAGGGAAAGATTCTGTTCTTCTGTCATGATGCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGACTACATGTTACAGGGAAAGATTCTGTTCTTCTGTCATGATGCTG  344

seq1  TGCTGACATTTAGCTGATCTAGAACATAGGGTGATCTATACTGAATAAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGACATTTAGCTGATCTAGAACATAGGGTGATCTATACTGAATAAAC  394

seq1  AGTAACTTGTGAAAGAGGTAGCATACTGCTTTGGAAGGCAAATAATCAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAACTTGTGAAAGAGGTAGCATACTGCTTTGGAAGGCAAATAATCAGG  444

seq1  GATGGCCTATATTCCAGGTTGTGCCTTCCAGACCAACAACTACCTTCTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCCTATATTCCAGGTTGTGCCTTCCAGACCAACAACTACCTTCTGT  494

seq1  ATTTCCTGGATATTAACGTAAAATTTAGTTGTTTCTATTGCATAATGTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCTGGATATTAACGTAAAATTTAGTTGTTTCTATTGCATAATGTGT  544

seq1  GGTATTCCATAGATTTGTATAGATGAGAAGAATGGAGATTTTATGCCTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATTCCATAGATTTGTATAGATGAGAAGAATGGAGATTTTATGCCTAT  594

seq1  ATTTGCTTTTTCTTTATAAATGAGCCAGGGTGAAATACTAAGTTTAACTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCTTTTTCTTTATAAATGAGCCAGGGTGAAATACTAAGTTTAACTG  644

seq1  TGTAAACCTACTCATAAAATTGCTGACTAAAATAAATTTGGAAAGTAACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAACCTACTCATAAAATTGCTGACTAAAATAAATTTGGAAAGTAACA  694

seq1  ATGAATGCAAGTGACACATATCTACTGATTGAATTGCATTTAGAAACCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATGCAAGTGACACATATCTACTGATTGAATTGCATTTAGAAACCTC  744

seq1  CCAGAAGACAGTGGGCTCTGGTGTAACACAAAGACTGCTTAAATATATAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAGACAGTGGGCTCTGGTGTAACACAAAGACTGCTTAAATATATAT  794

seq1  TTCTTTTCACCATGTGACTTTATTGCTAAATTATTTCAGGAATATTATTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTCACCATGTGACTTTATTGCTAAATTATTTCAGGAATATTATTC  844

seq1  AATATGTTTTTTTCTTCTGAAAGGAGAATTATTAAAAGTAGTAATGAATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGTTTTTTTCTTCTGAAAGGAGAATTATTAAAAGTAGTAATGAATT  894

seq1  ACCTTATTTGCTTCACTTAGCTGAGTCTCTTATAATCATATTGAATATTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTATTTGCTTCACTTAGCTGAGTCTCTTATAATCATATTGAATATTT  944

seq1  TTAGTAGGCACTGTTTCTATAAATTCTCTCTCCTTTTTTGTGCCTTCTTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTAGGCACTGTTTCTATAAATTCTCTCTCCTTTTTTGTGCCTTCTTT  994

seq1  CATGGAATTC  1010
      ||||||||||
seq2  CATGGAATTC  1004