BAC Information

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BAC

Clone NameB6Ng01-031L24
Chromosome14 (Build37)
Map Location 100,488,128 - 100,661,565
singlet/doubletdoublet
Overlap geneKlf12
Upstream geneDis3, D14Ertd581e, LOC100043395, LOC100043397, Klf5, LOC100043400, LOC100043789, LOC668671, LOC668672, EG546623
Downstream geneLOC100043413, EG668683, EG668684, 1700110M21Rik, LOC100043421
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-031L24.bB6Ng01-031L24.g
ACCDH861277DH861278
length1,051444
definitionDH861277|Mus musculus domesticus DNA, BAC clone: B6Ng01-031L24, 5' end.DH861278|Mus musculus domesticus DNA, BAC clone: B6Ng01-031L24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(100,660,505 - 100,661,565)(100,488,128 - 100,488,531)
sequence
gaattctactaaaatgaagaaagggcacaggccttctacagcctttgcaa
gggactccattgccagctcagtaacttccaagcactttagaatgtctgta
ttttgtttctgtgtgacacatttcattaagtatgtagaaacacttcaaca
aaattgcattctttggtatgagtggttaactgagcatttccagaccatca
ttagagagatctttgttagtaaatggtatactggacagttttttaccaac
tagacacagacctagacatagttggggagggggaatcttaatttggaaaa
tgccttcataagattggcctactgacaaatcttgataaataattgatgtg
ggagtgccctgatcactgtgggtggtgccactcctggacaggtagccttc
atggcctgcgtaagaaagcagccacggaagtaaaatggatagctggactc
ccttatggtttctgcttcagttctttcctccagcttcttgccccagctcc
cttcagggctggagtgtgaacagagagttctaagggaaataagtcctttc
tgccccaagttgcttttggtcatggtatttcatcatagcaatagacaact
tactaggatagattgtgttttgtgaatcctgttcctgaaacctctgaaat
cctgcacgggattgtgggttatttcactttaaaatagatggtgccagcaa
gttctactaggattatttaaaattctttccagatgagtttgtgtatagat
ctgaaaggtcgctcattcatttaattttttagcaaagatgttataggacg
atttaattcctattaaaaaatataagtcgtcagttatgaaaactgtatgc
taaatttcacagtagaagtattagaatccttcaaaggacatctttagact
tctcttcaaagtacagaacttttcccatctgtgccctctcccaccactct
gtactgacttaatagagatctgtagaatgcttaagcaaaaaaaaggaagt
ctcgcaagggaagttggtggtgaatctatctgagatgcgaggctgaatcc
t
ccaacccttgggaaaatttttgaaagaccaacctgcaacagcgcttgaga
gacacagcccacctatgtgaatccaggctgttccctcatagttactctat
ttctgtcatctagtgaaagtgatgttccacactccattcagcttgatgtt
ctgccacagtggtcagcagccaggcagcaggagcagcactctgaggacaa
gactgagtaagacaatccattccttcctagtgggtaaggagacaagattt
ccctctcccagccctcacagagcatagagtgaaaaccagagcagtggata
gagatgcagttagcagaggagaggagaggagaggagaggagaggagagga
gaggagaggatatcatatcttaggatagctgagggggagctgaggattgc
agaggagagcagagcagagcatagcagagcagagcagaggagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_100660505_100661565
seq2: B6Ng01-031L24.b_45_1095 (reverse)

seq1  AGGATTCCAGCTCTGCATCTCAGATAGATTTCCACCACCAAACTTCCC-T  49
      |||||| ||||   ||||||||||||||||  ||||||| |||||||| |
seq2  AGGATT-CAGCCTCGCATCTCAGATAGATT--CACCACC-AACTTCCCTT  46

seq1  GCGAGAC-TCCTTTTTTTTGCTTTAGCAATTCTTACAGATTCTCTATTAA  98
      ||||||| ||||||||||||||| ||| |||| |||||| ||||||||||
seq2  GCGAGACTTCCTTTTTTTTGCTTAAGC-ATTC-TACAGA-TCTCTATTAA  93

seq1  GTCAGTACAGAGTGTGGGGAGAGGGCACAGATGGGAAAAGTTCTGTACTT  148
      ||||||||||||||  ||||||||||||||||||||||||||||||||||
seq2  GTCAGTACAGAGTGGTGGGAGAGGGCACAGATGGGAAAAGTTCTGTACTT  143

seq1  TGAAGAGAAGTCTAAAGATGTCCTTTGAAGGATTCTTAATACTTCCTACT  198
      ||||||||||||||||||||||||||||||||||| |||||||| |||||
seq2  TGAAGAGAAGTCTAAAGATGTCCTTTGAAGGATTC-TAATACTT-CTACT  191

seq1  GTGAAATTTAGCATACAGTTTTTCATAACTGACGACTTATATTTTTTTAA  248
      |||||||||||||||||| |||||||||||||||||||||| ||||||||
seq2  GTGAAATTTAGCATACAG-TTTTCATAACTGACGACTTATA-TTTTTTAA  239

seq1  TAGGAATTAAATCGTCCTATAACATCTTTTGCTAAAAAATTAAATGAATG  298
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TAGGAATTAAATCGTCCTATAACATC-TTTGCTAAAAAATTAAATGAATG  288

seq1  AGCGACCTTTCAGATCTATACACAAACTCATCTGGAAAGAATTTTAAATA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGACCTTTCAGATCTATACACAAACTCATCTGGAAAGAATTTTAAATA  338

seq1  ATCCTAGTAGAACTTGCTGGCACCATCTATTTTAAAGTGAAATAACCCAC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTAGTAGAACTTGCTGGCACCATCTATTTTAAAGTGAAATAACCCAC  388

seq1  AATCCCCTGCAGGATTTCAGAGGTTTCAGGAACAGGATTCACAAAACACA  448
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCCGTGCAGGATTTCAGAGGTTTCAGGAACAGGATTCACAAAACACA  438

seq1  ATCTATCCTAGTAAGTTGTCTATTGCTATGATGAAATACCATGACCAAAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATCCTAGTAAGTTGTCTATTGCTATGATGAAATACCATGACCAAAA  488

seq1  GCAACTTGGGGCAGAAAGGACTTATTTCCCTTAGAACTCTCTGTTCACAC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTTGGGGCAGAAAGGACTTATTTCCCTTAGAACTCTCTGTTCACAC  538

seq1  TCCAGCCCTGAAGGGAGCTGGGGCAAGAAGCTGGAGGAAAGAACTGAAGC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCCCTGAAGGGAGCTGGGGCAAGAAGCTGGAGGAAAGAACTGAAGC  588

seq1  AGAAACCATAAGGGAGTCCAGCTATCCATTTTACTTCCGTGGCTGCTTTC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACCATAAGGGAGTCCAGCTATCCATTTTACTTCCGTGGCTGCTTTC  638

seq1  TTACGCAGGCCATGAAGGCTACCTGTCCAGGAGTGGCACCACCCACAGTG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACGCAGGCCATGAAGGCTACCTGTCCAGGAGTGGCACCACCCACAGTG  688

seq1  ATCAGGGCACTCCCACATCAATTATTTATCAAGATTTGTCAGTAGGCCAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGGCACTCCCACATCAATTATTTATCAAGATTTGTCAGTAGGCCAA  738

seq1  TCTTATGAAGGCATTTTCCAAATTAAGATTCCCCCTCCCCAACTATGTCT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATGAAGGCATTTTCCAAATTAAGATTCCCCCTCCCCAACTATGTCT  788

seq1  AGGTCTGTGTCTAGTTGGTAAAAAACTGTCCAGTATACCATTTACTAACA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTGTGTCTAGTTGGTAAAAAACTGTCCAGTATACCATTTACTAACA  838

seq1  AAGATCTCTCTAATGATGGTCTGGAAATGCTCAGTTAACCACTCATACCA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATCTCTCTAATGATGGTCTGGAAATGCTCAGTTAACCACTCATACCA  888

seq1  AAGAATGCAATTTTGTTGAAGTGTTTCTACATACTTAATGAAATGTGTCA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATGCAATTTTGTTGAAGTGTTTCTACATACTTAATGAAATGTGTCA  938

seq1  CACAGAAACAAAATACAGACATTCTAAAGTGCTTGGAAGTTACTGAGCTG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAAACAAAATACAGACATTCTAAAGTGCTTGGAAGTTACTGAGCTG  988

seq1  GCAATGGAGTCCCTTGCAAAGGCTGTAGAAGGCCTGTGCCCTTTCTTCAT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGGAGTCCCTTGCAAAGGCTGTAGAAGGCCTGTGCCCTTTCTTCAT  1038

seq1  TTTAGTAGAATTC  1061
      |||||||||||||
seq2  TTTAGTAGAATTC  1051

seq1: chr14_100488128_100488531
seq2: B6Ng01-031L24.g_67_516

seq1  GAATTCCCAACCCTTGGGAAAATTTTTGAAAGACCAACCTGCAACAGCGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCAACCCTTGGGAAAATTTTTGAAAGACCAACCTGCAACAGCGC  50

seq1  TTGAGAGACACAGCCCACCTATGTGAATCCAGGCTGTTCCCTCATAGTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGAGACACAGCCCACCTATGTGAATCCAGGCTGTTCCCTCATAGTTA  100

seq1  CTCTATTTCTGTCATCTAGTGAAAGTGATGTTCCACACTCCATTCAGCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATTTCTGTCATCTAGTGAAAGTGATGTTCCACACTCCATTCAGCTT  150

seq1  GATGTTCTGCCACAGTGGTCAGCAGCCAGGCAGCAGGAGCAGCACTCTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTCTGCCACAGTGGTCAGCAGCCAGGCAGCAGGAGCAGCACTCTGA  200

seq1  GGACAAGACTGAGTAAGACAATCCATTCCTTCCTAGTGGGTAAGGAGACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAAGACTGAGTAAGACAATCCATTCCTTCCTAGTGGGTAAGGAGACA  250

seq1  AGATTTCCCTCTCCCAGCCCTCACAGAGCATAGAGTGAAAACCAGAGCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTCCCTCTCCCAGCCCTCACAGAGCATAGAGTGAAAACCAGAGCAG  300

seq1  TGGATAGAGATGCAGTTAGCAGAGGAGAGGAGAGGAGAGGAGAGGAGAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATAGAGATGCAGTTAGCAGAGGAGAGGAGAGGAGAGGAGAGGAGAGG  350

seq1  AGAGGAGAGGAGAGGAGAGCA---------------------GAGCAGAG  379
      |||||||||||||||| | ||                     |||| |||
seq2  AGAGGAGAGGAGAGGATATCATATCTTAGGATAGCTGAGGGGGAGCTGAG  400

seq1  GAGAGCAGAGGAGAGCAGAGGAGAG-------------------------  404
      ||  |||||||||||||||| ||||                         
seq2  GATTGCAGAGGAGAGCAGAGCAGAGCATAGCAGAGCAGAGCAGAGGAGAG  450