BAC Information

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BAC

Clone NameB6Ng01-031N03
Chromosome14 (Build37)
Map Location 47,935,982 - 48,088,784
singlet/doubletdoublet
Overlap geneC130032J12Rik, Lgals3, Dlg7, LOC666895
Upstream geneLOC100041724, Bmp4, LOC100041732, LOC100041754, Cdkn3, Cnih, Gmfb, Cgrrf1, Samd4, Gch1, Wdhd1, Socs4, LOC670795
Downstream geneFbxo34, D14Ertd436e, EG625730, LOC100042787, Ktn1, 4930447J18Rik, Map1lc3-ps2, Peli2, EG624367, LOC100041831, 6720456H20Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-031N03.bB6Ng01-031N03.g
ACCDH861330DH861331
length9941,070
definitionDH861330|Mus musculus domesticus DNA, BAC clone: B6Ng01-031N03, 5' end.DH861331|Mus musculus domesticus DNA, BAC clone: B6Ng01-031N03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(48,088,096 - 48,088,784)(47,935,982 - 47,937,069)
sequence
gaattccactcatgatgtatcatttcctgtagcttgatggggaactgagt
tttactcatatgtaactaaccaagttccgatgcttaggaactacttggta
agcaaaggttgaggggggtgcttttaaagtttttcttctgtaagattaac
catgagattgtactaagaagtagttagcccctgcagtcacgagaggcagg
catagttgagaaatagatggagagatgagagacatcttttagatccccaa
aatcatcctgagacatcctacatgacctcagccagtgaagtcagatggga
gaatctatgaagactttgaccctgaggtctgaagtcgatcgagtagaaac
ccagaagtggggacttcttacagcaaaaggctcaggagttgcacccagaa
aaccaggataacaacactgcctcaagaattagaaaaaaattcataaaagg
ggaatgcaacctggtgtatcctgatgattattagaaaacacagggctggt
gagatggctcagtggctaagaacacccgactgctcttccaaaggtccgga
gttcaaatcccagcaaccacatggtggctcgcaaccatctgtaacaagat
ctgacgccctcttctggagtatgtgaagacagctacagtgtacttacata
taattaataaataaataaatcttttaaaaaaaaagaaaacacaaagaatt
aaagctaccttcatcccaaggacaaaaaaaaaatcaggtttaaggtagca
attcatgtaaataattaccaccaccaccattatcatcatcatcactgtca
tcaccaccatcatcagcaccatcaccatcatcaccaccatcatcactgtc
atcaccaccatcatcaccaccatcaccaccatcatcactgtcatcaccac
catcatcaccaccatcatcaccattaccatcacagtaatcatcatcactg
tcatcaccaccatcaacatctctaccaccatcacatcaccacag
gaattccattcacaatttaactgcaactgttgttgcacactcaaatattt
ttgacctaacaagatacaggttgctttaatgcatctacttctgtctgcaa
ccttgcgtcgatgtccctctgaggaacccacaattcatgagcgtacttat
gccattgttctacagaaggtttagtgtggaaagaactatgcaaagccacc
ccagctactgagcctgtggactcagcaataagacttaaaattccagcaac
gattcctaacttacgctttgttctttttttatctctccatgagctgttat
taatccacatggtttaaatacttctggtaaaacttgtaaaagatttctag
ttctgccatgctaagtcctgcaaaaaaaaaaaaatccatataatgagaaa
tatataaatgaggattatctacatagatctgacacatggtaggggaattc
attattccttgtaggagtactttccattgatatctttagtgtggcccccc
tattatttacataaggtattgaaaaagcaaaacctttcctctgatttcaa
tgaacaggagtgatttaaaaaaaacaaaacaaaacagtcttgccaatcaa
ttacaatttacaggccaagaagaaggtaatgtagatggctgaggagtcct
ggttacagggttcccatgggatacatagtagaattaactccccttcagtc
tgttaacaacctccatttcccagacttcttattcacaaaaataggggggt
tccatggagatgtagatggttcaatttgccctttttgaagttgcttctca
accacaggttgtgcggcatccaattgctgctttgttcagtccagagggga
tacgtttttcccatagaatttgtatagactacatctatagagtataaatg
taaatgagcaccccgttgctcaagacatctcttacaaaaatactaacagg
tacttgtataagaaggttttaaacagcagtttgcccatctcagtatcgag
tatcgagactgaatctaacactttggtttatagagaattgaggctgagaa
caatactttatccaaggtag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_48088096_48088784
seq2: B6Ng01-031N03.b_45_733 (reverse)

seq1  TTTTCTTTTTTTTTAAAAGATTTATTTATTTATTAATTATATGTAAGTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTTTTTTTAAAAGATTTATTTATTTATTAATTATATGTAAGTAC  50

seq1  ACTGTAGCTGTCTTCACATACTCCAGAAGAGGGCGTCAGATCTTGTTACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTAGCTGTCTTCACATACTCCAGAAGAGGGCGTCAGATCTTGTTACA  100

seq1  GATGGTTGCGAGCCACCATGTGGTTGCTGGGATTTGAACTCCGGACCTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGTTGCGAGCCACCATGTGGTTGCTGGGATTTGAACTCCGGACCTTT  150

seq1  GGAAGAGCAGTCGGGTGTTCTTAGCCACTGAGCCATCTCACCAGCCCTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAGCAGTCGGGTGTTCTTAGCCACTGAGCCATCTCACCAGCCCTGT  200

seq1  GTTTTCTAATAATCATCAGGATACACCAGGTTGCATTCCCCTTTTATGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCTAATAATCATCAGGATACACCAGGTTGCATTCCCCTTTTATGAA  250

seq1  TTTTTTTCTAATTCTTGAGGCAGTGTTGTTATCCTGGTTTTCTGGGTGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTCTAATTCTTGAGGCAGTGTTGTTATCCTGGTTTTCTGGGTGCA  300

seq1  ACTCCTGAGCCTTTTGCTGTAAGAAGTCCCCACTTCTGGGTTTCTACTCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTGAGCCTTTTGCTGTAAGAAGTCCCCACTTCTGGGTTTCTACTCG  350

seq1  ATCGACTTCAGACCTCAGGGTCAAAGTCTTCATAGATTCTCCCATCTGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGACTTCAGACCTCAGGGTCAAAGTCTTCATAGATTCTCCCATCTGAC  400

seq1  TTCACTGGCTGAGGTCATGTAGGATGTCTCAGGATGATTTTGGGGATCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTGGCTGAGGTCATGTAGGATGTCTCAGGATGATTTTGGGGATCTA  450

seq1  AAAGATGTCTCTCATCTCTCCATCTATTTCTCAACTATGCCTGCCTCTCG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATGTCTCTCATCTCTCCATCTATTTCTCAACTATGCCTGCCTCTCG  500

seq1  TGACTGCAGGGGCTAACTACTTCTTAGTACAATCTCATGGTTAATCTTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGCAGGGGCTAACTACTTCTTAGTACAATCTCATGGTTAATCTTAC  550

seq1  AGAAGAAAAACTTTAAAAGCACCCCCCTCAACCTTTGCTTACCAAGTAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAAAAACTTTAAAAGCACCCCCCTCAACCTTTGCTTACCAAGTAGT  600

seq1  TCCTAAGCATCGGAACTTGGTTAGTTACATATGAGTAAAACTCAGTTCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAAGCATCGGAACTTGGTTAGTTACATATGAGTAAAACTCAGTTCCC  650

seq1  CATCAAGCTACAGGAAATGATACATCATGAGTGGAATTC  689
      |||||||||||||||||||||||||||||||||||||||
seq2  CATCAAGCTACAGGAAATGATACATCATGAGTGGAATTC  689

seq1: chr14_47935982_47937069
seq2: B6Ng01-031N03.g_65_1134

seq1  GAATTCCATTCACAATTTAACTGCAACTGTTGTTGCACACTCAAATATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTCACAATTTAACTGCAACTGTTGTTGCACACTCAAATATTT  50

seq1  TTGACCTAACAAGATACAGGTTGCTTTAATGCATCTACTTCTGTCTGCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACCTAACAAGATACAGGTTGCTTTAATGCATCTACTTCTGTCTGCAA  100

seq1  CCTTGCGTCGATGTCCCTCTGAGGAACCCACAATTCATGAGCGTACTTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGCGTCGATGTCCCTCTGAGGAACCCACAATTCATGAGCGTACTTAT  150

seq1  GCCATTGTTCTACAGAAGGTTTAGTGTGGAAAGAACTATGCAAAGCCACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATTGTTCTACAGAAGGTTTAGTGTGGAAAGAACTATGCAAAGCCACC  200

seq1  CCAGCTACTGAGCCTGTGGACTCAGCAATAAGACTTAAAATTCCAGCAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTACTGAGCCTGTGGACTCAGCAATAAGACTTAAAATTCCAGCAAC  250

seq1  GATTCCTAACTTACGCTTTGTTCTTTTTTTATCTCTCCATGAGCTGTTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCCTAACTTACGCTTTGTTCTTTTTTTATCTCTCCATGAGCTGTTAT  300

seq1  TAATCCACATGGTTTAAATACTTCTGGTAAAACTTGTAAAAGATTTCTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCCACATGGTTTAAATACTTCTGGTAAAACTTGTAAAAGATTTCTAG  350

seq1  TTCTGCCATGCTAAGTCCTGCAAAAAAAAAAAAATCCATATAATGAGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCCATGCTAAGTCCTGCAAAAAAAAAAAAATCCATATAATGAGAAA  400

seq1  TATATAAATGAGGATTATCTACATAGATCTGACACATGGTAGGGGAATTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAAATGAGGATTATCTACATAGATCTGACACATGGTAGGGGAATTC  450

seq1  ATTATTCCTTGTAGGAGTACTTTCCATTGATATCTTTAGTGTGGCCCCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTCCTTGTAGGAGTACTTTCCATTGATATCTTTAGTGTGGCCCCCC  500

seq1  TATTATTTACATAAGGTATTGAAAAAGCAAAACCTTTCCTCTGATTTCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTTACATAAGGTATTGAAAAAGCAAAACCTTTCCTCTGATTTCAA  550

seq1  TGAACAGGAGTGATTTAAAAAAAACAAAACAAAACAGTCTTGCCAATCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACAGGAGTGATTTAAAAAAAACAAAACAAAACAGTCTTGCCAATCAA  600

seq1  TTACAATTTACAGGCCAAGAAGAAGGTAATGTAGATGGCTGAGGAGTCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAATTTACAGGCCAAGAAGAAGGTAATGTAGATGGCTGAGGAGTCCT  650

seq1  GGTTACAGGGTTCCCATGGGATACATAGTAGAATTAACTCCCCTTCAGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTACAGGGTTCCCATGGGATACATAGTAGAATTAACTCCCCTTCAGTC  700

seq1  TGTTAACAACCTCCATTTCCCAGACTTCTTATTCACAAAAATAGGGGGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAACAACCTCCATTTCCCAGACTTCTTATTCACAAAAATAGGGGGGT  750

seq1  TCCATGGAGATGTAGATGGTTCAATTTGCCCTTTTTGAAGTTGCTTCTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGGAGATGTAGATGGTTCAATTTGCCCTTTTTGAAGTTGCTTCTCA  800

seq1  ACCACAGGTTGTGCGGCATCCAATTGCTGCTTTGTTCAGTCCAGAGGGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACAGGTTGTGCGGCATCCAATTGCTGCTTTGTTCAGTCCAGAGGGGA  850

seq1  TACGTTTTTCCCATAGAATTTGTATAGACTACATCTATAGAGTATTAAAT  900
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TACGTTTTTCCCATAGAATTTGTATAGACTACATCTATAGAGTA-TAAAT  899

seq1  GTTAAATGAGCACCCCGTTGCTCCAAGACATCTCTTACAAAAATACTAAC  950
      | |||||||||||||||||||| |||||||||||||||||||||||||||
seq2  G-TAAATGAGCACCCCGTTGCT-CAAGACATCTCTTACAAAAATACTAAC  947

seq1  AGGTACTTGTAATAAGAAAGGTTTTAAAACAGCAGTTTGCCCATCTTCAG  1000
      |||||||||| ||||| |||||||| ||||||||||||||||||| ||||
seq2  AGGTACTTGT-ATAAG-AAGGTTTT-AAACAGCAGTTTGCCCATC-TCAG  993

seq1  TAATCGAAGTAATCGAAGACATGATCTAAACACTTTGTTTAATAGAGATT  1050
      | |||| ||| |||| ||||   |||| ||||||||| || ||||||| |
seq2  T-ATCG-AGT-ATCG-AGACTGAATCT-AACACTTTGGTTTATAGAGAAT  1038

seq1  AGAGGCTGAGAACCAATACCTTTTATTTCACAAGGTAG  1088
       ||||||||||| ||||||  |||||    ||||||||
seq2  TGAGGCTGAGAA-CAATAC--TTTAT---CCAAGGTAG  1070