BAC Information

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BAC

Clone NameB6Ng01-032P10
Chromosome14 (Build37)
Map Location 42,069,016 - 42,070,013
singlet/doubletsinglet
Overlap geneEG666099
Upstream geneLOC218945, LOC100040470, LOC382876, Sh2d4b, Tspan14, 5730469M10Rik, Dydc2, EG622782, Dydc1, Mat1a, Sftpa1, LOC100040498, LOC666079, Mbl1, Sftpd, LOC666093
Downstream geneLOC100040545, LOC676294, LOC545034, LOC100040587, EG666138, EG624191, EG666149, LOC666155, EG666156, LOC100040642, LOC100041729, LOC624277, LOC100041810, EG666186, LOC100041722, LOC100041841, EG666207, LOC666214, LOC632737, EG623168, LOC100041849, 1700016D02Rik, LOC100040726, LOC666228, LOC666233, LOC100041930, EG666152, EG385234, LOC100041950, LOC100041910, LOC674032, EG666239, LOC100040759, LOC100040771, EG666253, EG666264, LOC100040787
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032P10.bB6Ng01-032P10.g
ACCDH862147DH862148
length9851,219
definitionDH862147|Mus musculus domesticus DNA, BAC clone: B6Ng01-032P10, 5' end.DH862148|Mus musculus domesticus DNA, BAC clone: B6Ng01-032P10, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctatgaaatgcattgtttgcatttgtgacaatgttgcaatgtgca
cataatagatgctataacagcctatgtaatattacatggcagtaaataat
attatacaaaagcttgaggcctgagttcagagtcctatcacctctatcta
aagcatctcatggagtcatgcacctgtaataacagcagtgggcgacacct
aggcaaatccctgagtacactggggagtgtagccaattgctgaggtccct
gatcagtgagagatctattcttcaaaattacaatgttactgtgtttgagg
cagattcccagtagtgacctctgacctcaacttgtatgcacaaccccaca
ccccttaaaagaacactgtcatgaagcattactgactaatgtattgatgt
catcccttgtaaacttagtatgcttcatcatgtctgcggcttactctgtt
caatcaactttctgacagttcattgcttggtgtcttctctccaaaagttg
gattctgcagagtatattgaattatttctgtgtttttttttttttatcat
cttcttacactccaggttttatcctcctccaggtctactatctgactctt
ccccaccccatacctccatccagaccccgtctccacctggatgttcccac
actatccacaacagtcaccacactagccctaccctcccttgggcctccag
tcttttaagggttaagtgcatcttctctgactgaacttagacctggtagt
cctttgctgtatatgtgtttgtgtcataaacactgatgaatgctgcctgg
ttggtggtccatggtctgagaggtctcctggatccaggttaattgtgtct
gctggtcctgctacagggtcaccctgcccctcagcatatgtgtctttggg
tccaagttacctcaatatggatgatagtaattccacccatttgcatgcaa
tctcagatgtccttgtgcttagtagctagtagtat
gaattcaagacactacaatttgaggagtatgggatattacacataagtga
gctcaaaaaaatccaggagagaactcctacagctgataaaccacttcagc
aaagtcaatggatacaaaattaactcaaacaatctaggaactttcctcta
ctcaaaggataattaggctgaggaagagtttttttaaacctacatacttc
acaatagtcacaaacaatatctcggtgtgactcgaacaaagcaagggaaa
gatctgaatgacaagaacattaagtctatgaacaaagaaatcaaagaaga
ccatagaagatggaaaaatatcccatggtcattgatgagcaggattaata
tactaaaaaaggtccatcttgccaaaagcaatctaaagattcaatgcaat
ccccatcacaattccaactcattccttcacagagatagaaaaagaaatgc
tcaaatttatctggaacaacataaatcccagtatatcaaaaactattcct
aacaataaaagaaaggctcgggaaatcaccattcctgatctccaaatata
acacagggcaatagtgataaaaatgtcatgtttctggtatagagagacaa
gtagaccgacagaatagaattgaagacctagaaatgaacctacactcaaa
tggtcacttgatctttgtcaaaggagccaaaaccatccagtggataaaag
acagcattttcaacaatttggtgctttttcaactggcagtctgcatatag
aagaatgcaaattgatgtattcttatctccttgtacaaagctctagtcta
agtcactcaaggacctccacataaaacaagatacattgaatctatacaag
agagagcagtaaagaacctcaacacattgtcacaggggaattgttcctgt
acaggacaccaatgactcatgctgtaggaccaaaacattgtcaatggacc
cataaaattgaaagtttgtaagtcaaggatgctgtcaaaggacaaatgcc
caccacatgtagggaaacttctgacatcttagtctgatagagggctaata
tcaaaattaaaaagactcagaagtacactcagaattccttatacctatag
atggtacgagcttaccaaattcacaggacttgatggctgaagtcctagag
gttccacctcgcacgaagtcaattaggacttagtttcatccgctcgtagt
gccggaaacaactcatcgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_42069016_42070013
seq2: B6Ng01-032P10.b_44_1028

seq1  GAATTCTATGAAATGCATTGATTGCATTTGTGACAATATTGCAATGTGCA  50
      |||||||||||||||||||| |||||||||||||||| ||||||||||||
seq2  GAATTCTATGAAATGCATTGTTTGCATTTGTGACAATGTTGCAATGTGCA  50

seq1  CATAATAGATGCTATAACAGCCTATGTAATAATACATGGCAGTACATAAT  100
      ||||||||||||||||||||||||||||||| |||||||||||| |||||
seq2  CATAATAGATGCTATAACAGCCTATGTAATATTACATGGCAGTAAATAAT  100

seq1  ATTATACAAAAGCTTGAGGCCTGAGTTCAGAGTCCTATCACCCCTATCTA  150
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ATTATACAAAAGCTTGAGGCCTGAGTTCAGAGTCCTATCACCTCTATCTA  150

seq1  AAGCTTCTCATGGAGTCATGCACCTGTAATAACAGCAGTGGGGGGACACC  200
      |||| |||||||||||||||||||||||||||||||||| ||| ||||||
seq2  AAGCATCTCATGGAGTCATGCACCTGTAATAACAGCAGT-GGGCGACACC  199

seq1  TAGGCAAATCCCTGCGTACACTGGGGAGTGTAGCCAATTGCTGAGGTCCC  250
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TAGGCAAATCCCTGAGTACACTGGGGAGTGTAGCCAATTGCTGAGGTCCC  249

seq1  TGATCAGTGAGAGATCTATTCTTCAAAATTACAATGTTACTGTGTTTGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCAGTGAGAGATCTATTCTTCAAAATTACAATGTTACTGTGTTTGAG  299

seq1  GCAGATTCCCAGTAGTGACCTCTGACCTCAACTTGTATGCACAACCCCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GCAGATTCCCAGTAGTGACCTCTGACCTCAACTTGTATGCACAACCCCAC  349

seq1  ACCCCCTAAAAGAATATTGTCATGAAGCATTACTGACTAATGTATTGATG  400
      ||||| |||||||| | |||||||||||||||||||||||||||||||||
seq2  ACCCCTTAAAAGAACACTGTCATGAAGCATTACTGACTAATGTATTGATG  399

seq1  TCATCCCTTGTAAACTTGGTATGCTTCATTATGTCTTCGGCTTCCACTCT  450
      ||||||||||||||||| ||||||||||| |||||| ||||||  |||||
seq2  TCATCCCTTGTAAACTTAGTATGCTTCATCATGTCTGCGGCTT--ACTCT  447

seq1  GTTCAAACAACTTTCTGACAGTTCATTGCTTGGTGTCTTCTCTCTAAAAG  500
      |||||| ||||||||||||||||||||||||||||||||||||| |||||
seq2  GTTCAATCAACTTTCTGACAGTTCATTGCTTGGTGTCTTCTCTCCAAAAG  497

seq1  TTGGTTTCTGTAGAGTAAATTGAATTATTTC-ATTATGGGTTTTTTTTAT  549
      |||| ||||| |||||| |||||||||||||  |  |   ||||||||||
seq2  TTGGATTCTGCAGAGTATATTGAATTATTTCTGTGTTTTTTTTTTTTTAT  547

seq1  CATCTTCTTACACTCCAGGTTTTATTCCCCTCCAGGTCTACTATCTAACT  599
      ||||||||||||||||||||||||| | |||||||||||||||||| |||
seq2  CATCTTCTTACACTCCAGGTTTTATCCTCCTCCAGGTCTACTATCTGACT  597

seq1  CTTCCCCACCCCATACCTCTATCCAGACCCCATCTCTACCTGGATGTTCC  649
      ||||||||||||||||||| ||||||||||| |||| |||||||||||||
seq2  CTTCCCCACCCCATACCTCCATCCAGACCCCGTCTCCACCTGGATGTTCC  647

seq1  CACGATATCCACAACTGTCACCACACTAGCCCTACCCTTCCTTGGGCCTC  699
      |||  |||||||||| |||||||||||||||||||||| |||||||||||
seq2  CACACTATCCACAACAGTCACCACACTAGCCCTACCCTCCCTTGGGCCTC  697

seq1  CAGTCTTTTAAGGGTTAGGTGCATCTTCTCTGACTGAACTTAGACCTGGT  749
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CAGTCTTTTAAGGGTTAAGTGCATCTTCTCTGACTGAACTTAGACCTGGT  747

seq1  AGTCCTTTGCTGTATATGTGTTTGGGGCCTCATAAACGCTGATGTATGCT  799
      |||||||||||||||||||||||| |   |||||||| |||||| |||||
seq2  AGTCCTTTGCTGTATATGTGTTTGTG---TCATAAACACTGATGAATGCT  794

seq1  GCCTGGTTGGTGGTTCAGGGTCTGACAGGTCTCTGGGATCCAGGTTAATT  849
      |||||||||||||| || ||||||| |||||||  |||||||||||||||
seq2  GCCTGGTTGGTGGTCCATGGTCTGAGAGGTCTCCTGGATCCAGGTTAATT  844

seq1  GTGTCTGCTGGTCCTGCCACAGGGTCATCCTGCCCCTCAGCATACATGTC  899
      ||||||||||||||||| ||||||||| ||||||||||||||||  ||||
seq2  GTGTCTGCTGGTCCTGCTACAGGGTCACCCTGCCCCTCAGCATATGTGTC  894

seq1  TTTTGGGTTTGAGTTACATCACTCAGTATGATAGTTTGTAATTCGACCCA  949
       |||||||   |||||| ||| |  | ||||||    ||||||| |||||
seq2  -TTTGGGTCCAAGTTACCTCAATATGGATGATA----GTAATTCCACCCA  939

seq1  TTTGCATGCAAATCTCAGGAGGTTCTTGTGCTTAGTAGCTTAGTAGTAT  998
      ||||||||| ||||||| || || ||||||||||||||| |||||||||
seq2  TTTGCATGC-AATCTCA-GATGTCCTTGTGCTTAGTAGC-TAGTAGTAT  985