BAC Information

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BAC

Clone NameB6Ng01-033J21
Chromosome14 (Build37)
Map Location 4,422,372 - 4,423,484
singlet/doubletsinglet
Overlap geneLOC100041119
Upstream geneLOC100040779, LOC100038846, EG666890, LOC100040544, LOC100040797, LOC100040555, LOC100040565, LOC100040578, LOC100040807, LOC100040859, LOC100040870, LOC100040880, LOC100040615, LOC100040923, LOC100040621, LOC100040641, LOC100040652, LOC100040935, LOC100040852, LOC100040674, LOC100040906, LOC100040688, LOC100040701, LOC100040897, LOC100041012, LOC100041019, ENSMUSG00000068790, LOC100041054, LOC666442, LOC100040793, LOC100041076, LOC100040801, LOC666336, LOC100041100, LOC100040808
Downstream gene2610042L04Rik, LOC100041139, LOC100041151, LOC100041177, LOC100041162, LOC100040889, LOC100040900, LOC100040917, LOC100040928, EG666560, LOC666555, EG666549, LOC100041262, LOC665981, LOC100041283, LOC100040996, LOC673676, LOC100041007, LOC100041317, LOC100041306, LOC100041024, LOC100041336, EG666815, LOC666808, EG666800, LOC100041374, 4930555G01Rik, EG666772, LOC666765, LOC100041401, LOC100041105, EG666750, LOC666743, LOC100041447, LOC673138, LOC666740, LOC641258
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-033J21.b
ACCDH862614
length1,108
definitionDH862614|Mus musculus domesticus DNA, BAC clone: B6Ng01-033J21, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaacatcattaaatcacaacatgagaagacaatgttggatatgga
taaaatgacccagtccataattgcttccatgaagttctctgaggaactgt
taaaagataactattcctacaggtgagtcagtgacaccactgagaccccc
ataactaggcagggaatgcttctgtccttttacgactttgaaaaaacgca
agggctctggttctatgttatcttttttttatttaggaaccctgcctgag
gcaagggtcttggatttgtacctcttggactcagttgtcctaagtgtgaa
gagtgtccaagaccctccaatctttattcttccaaattcaaggtcctcta
catagaaaacttttccaccatgctgggaatatccaggaaccctgaacctc
tagggttctgaccacagattaaaagatctaggattcccgacaaaaatgga
aagagtgtacacttgttgggtcagctgacctctctcagaggagataagcc
ctctccctgctgaaggttttatggtaccacagacctataatcaaccatga
agaacatttcctcttctgtgatgtatagggtgcactcttggtgtcagggc
tttcagaagtttgttgagtcctgtggaatatggctggtatcttgatttga
cctgcctctgtttggtgctgctatgtatactgtagactcttctgggactg
tctggtgttcagggccctgtaggaccatgggacttgtaggagtggaaagc
caatggaatctggatgggaatcaccaattttttctttgtggatcagcatc
aagcagaaacaccgcctccgtgagtgcactcaactaaaggaaaaagtgag
gatattactgaatgagaacagaaaggtgctggtggagcaggctggaacgc
agtgtcccgtggggaagaaaagaggttctgtgaggaggccagcaagacat
ctgtgcttcagtgctaaggagcagcagtaggatgatgttgttcaaaggca
gattgccctcatgtcttaccaaaacatagacaatctattatcaagtcccc
caactttctccaggcattccctattgtctcctccaatgtttgttatgtga
aacatcta
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_4422372_4423484
seq2: B6Ng01-033J21.b_52_1159

seq1  GAATTCAACATCATTAAATCACAACATGAGAAGACAATGTTGGATATGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACATCATTAAATCACAACATGAGAAGACAATGTTGGATATGGA  50

seq1  TAAAATGACCCAGTCCATAATTGCTTCCATGAAGTTCTCTGAGGAACTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATGACCCAGTCCATAATTGCTTCCATGAAGTTCTCTGAGGAACTGT  100

seq1  TAAAAGATAACTATTCCTACAGGTGAGTCAGTGACACCACTGAGACCCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGATAACTATTCCTACAGGTGAGTCAGTGACACCACTGAGACCCCC  150

seq1  ATAACTAGGCAGGGAATGCTTCTGTCCTTTTACGACTTTGAAAAAACGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTAGGCAGGGAATGCTTCTGTCCTTTTACGACTTTGAAAAAACGCA  200

seq1  AGGGCTCTGGTTCTATGTTATCTTTTTTTTATTTAGGAACCCTGCCTGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTCTGGTTCTATGTTATCTTTTTTTTATTTAGGAACCCTGCCTGAG  250

seq1  GCAAGGGTCTTGGATTTGTACCTCTTGGACTCAGTTGTCCTAAGTGTGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGGGTCTTGGATTTGTACCTCTTGGACTCAGTTGTCCTAAGTGTGAA  300

seq1  GAGTGTCCAAGACCCTCCAATCTTTATTCTTCCAAATTCAAGGTCCTCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTCCAAGACCCTCCAATCTTTATTCTTCCAAATTCAAGGTCCTCTA  350

seq1  CATAGAAAACTTTTCCACCATGCTGGGAATATCCAGGAACCCTGAACCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGAAAACTTTTCCACCATGCTGGGAATATCCAGGAACCCTGAACCTC  400

seq1  TAGGGTTCTGACCACAGATTAAAAGATCTAGGATTCCCGACAAAAATGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGTTCTGACCACAGATTAAAAGATCTAGGATTCCCGACAAAAATGGA  450

seq1  AAGAGTGTACACTTGTTGGGTCAGCTGACCTCTCTCAGAGGAGATAAGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTGTACACTTGTTGGGTCAGCTGACCTCTCTCAGAGGAGATAAGCC  500

seq1  CTCTCCCTGCTGAAGGTTTTATGGTACCACAGACCTATAATCAACCATGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCCTGCTGAAGGTTTTATGGTACCACAGACCTATAATCAACCATGA  550

seq1  AGAACATTTCCTCTTCTGTGATGTATAGGGTGCACTCTTGGTGTCAGGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACATTTCCTCTTCTGTGATGTATAGGGTGCACTCTTGGTGTCAGGGC  600

seq1  TTTCAGAAGTTTGTTGAGTCCTGTGGAATATGGCTGGTATCTTGATTTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGAAGTTTGTTGAGTCCTGTGGAATATGGCTGGTATCTTGATTTGA  650

seq1  CCTGCCTCTGTTTGGTGCTGCTATGTATACTGTAGACTCTTCTGGGACTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCTCTGTTTGGTGCTGCTATGTATACTGTAGACTCTTCTGGGACTG  700

seq1  TCTGGTGTTCAGGGCCCTGTAGGACCATGGGACTTGTAGGAGTGGAAAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTGTTCAGGGCCCTGTAGGACCATGGGACTTGTAGGAGTGGAAAGC  750

seq1  CAATGGAATCTGGATGGGAATCACCAA-TTTTTCTTTGTGGATCAGCATC  799
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CAATGGAATCTGGATGGGAATCACCAATTTTTTCTTTGTGGATCAGCATC  800

seq1  AAGCAGAAACACCGCCTCCGTGAGTGCACTCAACTAAAGGAAAAAGTGAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGAAACACCGCCTCCGTGAGTGCACTCAACTAAAGGAAAAAGTGAG  850

seq1  GATATTACTGAATGAGAACAGAAAGGTGCTGGTGGAGCAGGCTGGAACGC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTACTGAATGAGAACAGAAAGGTGCTGGTGGAGCAGGCTGGAACGC  900

seq1  AAGTGTCCCGTGGGGAAGAAAAGAGGTTCTGTGAGGAGGCCAGCAAGAAC  949
       |||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  -AGTGTCCCGTGGGGAAGAAAAGAGGTTCTGTGAGGAGGCCAGCAAG-AC  948

seq1  ATCTGTGCCTCAAGTGCCAAGGAGCAGCAGGTAGGATGATGTGTATCAGA  999
      |||||||| || ||||| ||||||||||| ||||||||||||   ||| |
seq2  ATCTGTGCTTC-AGTGCTAAGGAGCAGCA-GTAGGATGATGTTGTTCAAA  996

seq1  GGCAGATTGCCCTCATGTCTAACCATAAACATAGACAATCCAATATCACA  1049
      |||||||||||||||||||| |||| |||||||||||||| | ||||| |
seq2  GGCAGATTGCCCTCATGTCTTACCA-AAACATAGACAATCTATTATCA-A  1044

seq1  GTCCACCAAC-TTCTCCAGGCACTCACCTA-TGTCTCCTCCAAGTGTTTG  1097
      |||| ||||| ||||||||||| || |||| |||||||||||| ||||||
seq2  GTCCCCCAACTTTCTCCAGGCATTC-CCTATTGTCTCCTCCAA-TGTTTG  1092

seq1  TTTATGTG-ATCATCTA  1113
       ||||||| | ||||||
seq2  -TTATGTGAAACATCTA  1108