BAC Information

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BAC

Clone NameB6Ng01-033K08
Chromosome14 (Build37)
Map Location 77,401,665 - 77,605,302
singlet/doubletdoublet
Overlap gene9030625A04Rik, Ccdc122, D230005D02Rik
Upstream geneGtf2f2, 1200011I18Rik, Nufip1, LOC100043752, 2900040C04Rik, Tsc22d1, 2810032E02Rik, LOC100043753, LOC100043201
Downstream geneLOC100043755, LOC676171, EG629678, Gm1587, Dnajc15, Epsti1, AU021034
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-033K08.bB6Ng01-033K08.g
ACCDH862634DH862635
length1,036740
definitionDH862634|Mus musculus domesticus DNA, BAC clone: B6Ng01-033K08, 5' end.DH862635|Mus musculus domesticus DNA, BAC clone: B6Ng01-033K08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(77,604,256 - 77,605,302)(77,401,665 - 77,402,404)
sequence
gaattcaacctggcaatgcctgctttggaggcttcccctgtcttcccagt
cagtgctcctctgcccctgggcctgctattgatcttcagtgcagctccat
ggcccttctgtctggtgtatctcatcctggggccgtgactcgcctgtttg
cccagttcttagcatagtgctttaacacagtatgcctcctgggtgaatag
aaggagccatcagagatgacaaacccattctctctgggttcctctccatg
ccactgaactcagccaagttctaggtaatggtcctggataatcacatcaa
attactatacactctaaattactctgatttcaacttcattaatttggctg
gcctttccaagtttgtcttaaataaagaggtttttctctgctgagatatt
taaaaaagagtggagtatttttgtttttgttttttgactgaattatctta
gtatgtgccttacttctaggtcatgttccatgtattgaactttctatact
aaattactgagtttttaatttttaaaaaaatctgctaaagatatttttaa
gcagaatattatagacacctgtgttccttcatcatgaatccattttaaga
tggacaccagtcctgtttgtctccctttctttggaagtaatgtaggggcc
cggtgtggggaggcacctagctattctggagattagaaatgactaaaata
aactttctctgaaagatgcaactgcttttggctctgaataaccaacataa
ttcaaactccactttcacttaggatctcactccatgttccttatgaagcc
actgtctaaccagcttaaagcaaaacaaatattttccagcttaaaataaa
aaaatataataataaaacaaaactccaacctgagctgttcactttctttg
taacagcatgagcagagcaccctacagagcatctgggctgttacagtgca
caagaacacaagcactccatccttcggggcctcgtactggaaaggaaaaa
agaacttgcccttgggcttgcaatctaaattaaaca
gaattccattccaagagttcctgattcagtggaccacctggatgtgaaaa
tgtactcttattaagttctcaggtgatatcgatgaccacaaaagcatgcg
tgagtatggacggatgacatgcctgagtgtcagcatgataaagcccctgc
ccattttgttgtatgaataaggaagtagagacaagtggttaactgtttaa
gacagttaaatagcttttgtttttaaggtccactttgcaccacacagtgg
ctctaaattttagatgagattatgaatttagagtgactggcactatgctt
gggacctagaaatagtaaatattatcataatgtttttaattgtaataaaa
ctacccttaatagttccaagtcacatatgcatcatttttaaaagagttat
ttatttttacttgatgtgtgtgtttgcaagtaagtatgtatgtgtactag
gtatgtgcaatacacatagagacagaaagagggcatcacaacccctcaaa
ctgaagttacagatggttgtgagccaccctgtggatgctgggaaccaaac
tcagtcctcatcaagggcaggaagtgctcttaaccactgagccttccctc
tagcacatctctgcttctgtataagaactatttgtaagagcttggtcatt
tgtaagataaatggctgggaaagagaaatctctaatgtctttttttttag
atccagaaagctctgtttttcattagtaagagtatatccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_77604256_77605302
seq2: B6Ng01-033K08.b_45_1080 (reverse)

seq1  TGTTTAATTTAGATTACAAGCCCATGGGGCAAGCTTCTTTTCTTTCCTCT  50
      ||||||||||||||| ||||||||  ||||||| ||||||  |||||| |
seq2  TGTTTAATTTAGATTGCAAGCCCA-AGGGCAAG-TTCTTT--TTTCCTTT  46

seq1  GCAGTACTGAGGGCCCCGAAGGCTGGAGTGCTTGTGTTCTTGTGCACTGT  100
       |||||| || ||||||||||| |||||||||||||||||||||||||||
seq2  CCAGTAC-GA-GGCCCCGAAGGATGGAGTGCTTGTGTTCTTGTGCACTGT  94

seq1  TACAGCCCAGCTGCTCTGCTAGGGTGCTCTGCTCATGCTGTTTACAAAG-  149
       ||||||||| ||||||| ||||||||||||||||||||| |||||||| 
seq2  AACAGCCCAGATGCTCTG-TAGGGTGCTCTGCTCATGCTG-TTACAAAGA  142

seq1  AAGTGAACAGCTCAGGTTGGTGTTTTGTTTTATTATTATTATTCTTTTTT  199
      |||||||||||||||||||| ||||||||||||||||| |||  ||||||
seq2  AAGTGAACAGCTCAGGTTGGAGTTTTGTTTTATTATTA-TAT--TTTTTT  189

seq1  ATTTTAAGCTGGAAAATATTTTGTTTTGCTTTAAGCTGGTTAGACAGTGG  249
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  ATTTTAAGCTGGAAAATA-TTTGTTTTGCTTTAAGCTGGTTAGACAGTGG  238

seq1  CTTCATAAGGAACATGGAGTGAGATCCTAAGTGGAAGTGGAGTTTGAATT  299
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CTTCATAAGGAACATGGAGTGAGATCCTAAGTGAAAGTGGAGTTTGAATT  288

seq1  ATGTTGGTTATTCAGAGCCAAAAGCAGTTGCATCTTTCAGAGAAAGTTTA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGGTTATTCAGAGCCAAAAGCAGTTGCATCTTTCAGAGAAAGTTTA  338

seq1  TTTTAGTCATTTCTAATCTCCAGAATAGCTAGGTGCCTCCCCACACCGGG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGTCATTTCTAATCTCCAGAATAGCTAGGTGCCTCCCCACACCGGG  388

seq1  CCCCTACATTACTTCCAAAGAAAGGGAGACAAACAGGACTGGTGTCCATC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTACATTACTTCCAAAGAAAGGGAGACAAACAGGACTGGTGTCCATC  438

seq1  TTAAAATGGATTCATGATGAAGGAACACAGGTGTCTATAATATTCTGCTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATGGATTCATGATGAAGGAACACAGGTGTCTATAATATTCTGCTT  488

seq1  AAAAATATCTTTAGCAGATTTTTTTAAAAATTAAAAACTCAGTAATTTAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATATCTTTAGCAGATTTTTTTAAAAATTAAAAACTCAGTAATTTAG  538

seq1  TATAGAAAGTTCAATACATGGAACATGACCTAGAAGTAAGGCACATACTA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGAAAGTTCAATACATGGAACATGACCTAGAAGTAAGGCACATACTA  588

seq1  AGATAATTCAGTCAAAAAACAAAAACAAAAATACTCCACTCTTTTTTAAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAATTCAGTCAAAAAACAAAAACAAAAATACTCCACTCTTTTTTAAA  638

seq1  TATCTCAGCAGAGAAAAACCTCTTTATTTAAGACAAACTTGGAAAGGCCA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCAGCAGAGAAAAACCTCTTTATTTAAGACAAACTTGGAAAGGCCA  688

seq1  GCCAAATTAATGAAGTTGAAATCAGAGTAATTTAGAGTGTATAGTAATTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAATTAATGAAGTTGAAATCAGAGTAATTTAGAGTGTATAGTAATTT  738

seq1  GATGTGATTATCCAGGACCATTACCTAGAACTTGGCTGAGTTCAGTGGCA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGATTATCCAGGACCATTACCTAGAACTTGGCTGAGTTCAGTGGCA  788

seq1  TGGAGAGGAACCCAGAGAGAATGGGTTTGTCATCTCTGATGGCTCCTTCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAGGAACCCAGAGAGAATGGGTTTGTCATCTCTGATGGCTCCTTCT  838

seq1  ATTCACCCAGGAGGCATACTGTGTTAAAGCACTATGCTAAGAACTGGGCA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACCCAGGAGGCATACTGTGTTAAAGCACTATGCTAAGAACTGGGCA  888

seq1  AACAGGCGAGTCACGGCCCCAGGATGAGATACACCAGACAGAAGGGCCAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGCGAGTCACGGCCCCAGGATGAGATACACCAGACAGAAGGGCCAT  938

seq1  GGAGCTGCACTGAAGATCAATAGCAGGCCCAGGGGCAGAGGAGCACTGAC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTGCACTGAAGATCAATAGCAGGCCCAGGGGCAGAGGAGCACTGAC  988

seq1  TGGGAAGACAGGGGAAGCCTCCAAAGCAGGCATTGCCAGGTTGAATTC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAGACAGGGGAAGCCTCCAAAGCAGGCATTGCCAGGTTGAATTC  1036

seq1: chr14_77401665_77402404
seq2: B6Ng01-033K08.g_67_806

seq1  GAATTCCATTCCAAGAGTTCCTGATTCAGTGGACCACCTGGATGTGAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTCCAAGAGTTCCTGATTCAGTGGACCACCTGGATGTGAAAA  50

seq1  TGTACACTTATTAAGTTCTCAGGTGATATCGATGACCACAAAAGCATGCG  100
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTCTTATTAAGTTCTCAGGTGATATCGATGACCACAAAAGCATGCG  100

seq1  TGAGTATGGACGGATGACATGCCTGAGTGTCAGCATGATAAAGCCCCTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTATGGACGGATGACATGCCTGAGTGTCAGCATGATAAAGCCCCTGC  150

seq1  CCATTTTGTTGTATGAATAAGGAAGTAGAGACAAGTGGTTAACTGTTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTTGTTGTATGAATAAGGAAGTAGAGACAAGTGGTTAACTGTTTAA  200

seq1  GACAGTTAAATAGCTTTTGTTTTTAAGGTCCACTTTGCACCACACAGTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGTTAAATAGCTTTTGTTTTTAAGGTCCACTTTGCACCACACAGTGG  250

seq1  CTCTAAATTTTAGATGAGATTATGAATTTAGAGTGACTGGCACTATGCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAAATTTTAGATGAGATTATGAATTTAGAGTGACTGGCACTATGCTT  300

seq1  GGGACCTAGAAATAGTAAATATTATCATAATGTTTTTAATTGTAATAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACCTAGAAATAGTAAATATTATCATAATGTTTTTAATTGTAATAAAA  350

seq1  CTACCCTTAATAGTTCCAAGTCACATATGCATCATTTTTAAAAGAGTTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCCTTAATAGTTCCAAGTCACATATGCATCATTTTTAAAAGAGTTAT  400

seq1  TTATTTTTACTTGATGTGTGTGTTTGCAAGTAAGTATGTATGTGTACTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTTACTTGATGTGTGTGTTTGCAAGTAAGTATGTATGTGTACTAG  450

seq1  GTATGTGCAATACACATAGAGACAGAAAGAGGGCATCACAACCCCTCAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTGCAATACACATAGAGACAGAAAGAGGGCATCACAACCCCTCAAA  500

seq1  CTGAAGTTACAGATGGTTGTGAGCCACCCTGTGGATGCTGGGAACCAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGTTACAGATGGTTGTGAGCCACCCTGTGGATGCTGGGAACCAAAC  550

seq1  TCAGTCCTCATCAAGGGCAGGAAGTGCTCTTAACCACTGAGCCTTCCCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCCTCATCAAGGGCAGGAAGTGCTCTTAACCACTGAGCCTTCCCTC  600

seq1  TAGCACATCTCTGCTTCTGTATAAGAACTATTTGTAAGAGCTTGGTCATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCACATCTCTGCTTCTGTATAAGAACTATTTGTAAGAGCTTGGTCATT  650

seq1  TGTAAGATAAATGGCT-GGAAAGAGAAATCTCTAATGTCTTCTTTTTTAG  699
      |||||||||||||||| |||||||||||||||||||||||| ||||||||
seq2  TGTAAGATAAATGGCTGGGAAAGAGAAATCTCTAATGTCTTTTTTTTTAG  700

seq1  ATCCAGAAAGCTCTGTTTTTACATTAGTAAGAGTATATCCC  740
      |||||||||||||||||||| ||||||||||||||||||||
seq2  ATCCAGAAAGCTCTGTTTTT-CATTAGTAAGAGTATATCCC  740