BAC Information

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BAC

Clone NameB6Ng01-033K22
Chromosome14 (Build37)
Map Location 35,495,840 - 35,678,388
singlet/doubletdoublet
Overlap geneWapal, LOC100041341, Grid1
Upstream geneGdf10, Gdf2, Rbp3, Zfp488, EG665754, EG432838, Antxrl, Anxa8, LOC100041131, LOC665768, Ppyr1, LOC100041163, Gprin2, Syt15, 3110001K24Rik, LOC623142, Glud1, LOC100041231, 2200001I15Rik, Sncg, Mmrn2, Bmpr1a, 9230112D13Rik, LOC665834, Ldb3, Opn4, 5830448L01Rik
Downstream gene4930596D02Rik, LOC100040277
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-033K22.bB6Ng01-033K22.g
ACCDH862662DH862663
length887699
definitionDH862662|Mus musculus domesticus DNA, BAC clone: B6Ng01-033K22, 5' end.DH862663|Mus musculus domesticus DNA, BAC clone: B6Ng01-033K22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(35,495,840 - 35,496,722)(35,677,691 - 35,678,388)
sequence
gaattcagtctacatatcctgccaaatattgagataaccatagcataggc
tcttaatttgcatggttggtttcatagccaataaatttttttcgtttgct
taaagctgtattgagtgtgtgagctttctggggggtattatcaggacatt
ctgagatttgattttagaaccaaaggtgtttttcaggaaaggggaatgaa
tagttctacttttgacagttttaaagtgggctgaagaggtggctcagggg
ttaaggatgcatatggctcttggagaagacctgtgtagcttccagcacct
accagtgattacagtcccaggggaaccaaacatctctggcctctgtgagc
acctgcactcttgtttatttacccacacagaaggatataatatgaacata
tttttttaaagaaacatgagctacaaacttatctgaggtgatagtcttaa
taatatcaggaagttagttatttgcctataggtagtgagtgtttgtataa
aatgtacttgtcatttttcaagttttatgaaaagtagttaagaaatctgt
ttctagttccagctttgtgctaagccttttatatttcatagccttgtaaa
gctggcttaattcatattatataaagtgtaaagcatcattcagaagttgg
ataacttgaattaaatggaatagttgtgaaacacccaaattgctcttttc
atattatagtctggtattgttatatttctggtagggatgaactttaacag
gatttttagaataaaacagctgtcataagatagatttttaatttaaaatt
tattttttattttttattttttggtttttaagacagggtttctgtgtgta
gccctgggtgtcctggaactcacttttgtagacgagg
gaattccctgatccttgaccccaaccccagagccacttcaattagaaatt
caaccgtggctcctatacaatgtcctggaaagttggcacagaggggcatg
tacctttgcccaaatgaattggtgaggcagaaaccttacacacctggcct
cagagtgaccttgggtagcaacccaaaaatgtgttctgtgtggtggtgtg
gatcaaaagaactgtgccatgccgcagaaggaaaaggaaggaggtccaac
tgttaagtatataaaaccacctggttggaaggtctctaaaagcaccatta
ttccattatttatgataggaaatagtctatgtcagtagggagatgatata
gtaaatggtagatttaggagagcttgtcttagcctctgggatttataaag
tcgcagtggagataaggggatagaaagctgcagagaattaattttcttgg
gaccgaaagactaaggtgagtcctgaacacagttggaattgagcaaagag
aaaaataacatccagatgggactagaccctagggtagaattctcaaccac
ccagtaaggggccccttgtcacatgagtggcatgaccattaacaaaaagc
acagcacatcaagtgatctagcagcacttgttctaagaactgtaccgcag
ggaggactttgtaggagagcctggaggagaaagaggaaaagagaacata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_35495840_35496722
seq2: B6Ng01-033K22.b_45_931

seq1  GAATTCAGTCTACATATCCTGCCAAATATTGAGATAACCATAGCATAGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTCTACATATCCTGCCAAATATTGAGATAACCATAGCATAGGC  50

seq1  TCTTAATTTGCATGGTTGGTTTCATAGCCAATAAATTTTTTTCGTTTGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAATTTGCATGGTTGGTTTCATAGCCAATAAATTTTTTTCGTTTGCT  100

seq1  TAAAGCTGTATTGAGTGTGTGAGCTTTCTGGGGGGTATTATCAGGACATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCTGTATTGAGTGTGTGAGCTTTCTGGGGGGTATTATCAGGACATT  150

seq1  CTGAGATTTGATTTTAGAACCAAAGGTGTTTTTCAGGAAAGGGGAATGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGATTTGATTTTAGAACCAAAGGTGTTTTTCAGGAAAGGGGAATGAA  200

seq1  TAGTTCTACTTTTGACAGTTTTAAAGTGGGCTGAAGAGGTGGCTCAGGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCTACTTTTGACAGTTTTAAAGTGGGCTGAAGAGGTGGCTCAGGGG  250

seq1  TTAAGGATGCATATGGCTCTTGGAGAAGACCTGTGTAGCTTCCAGCACCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGGATGCATATGGCTCTTGGAGAAGACCTGTGTAGCTTCCAGCACCT  300

seq1  ACCAGTGATTACAGTCCCAGGGGAACCAAACATCTCTGGCCTCTGTGAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGTGATTACAGTCCCAGGGGAACCAAACATCTCTGGCCTCTGTGAGC  350

seq1  ACCTGCACTCTTGTTTATTTACCCACACAGAAGGATATAATATGAACATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGCACTCTTGTTTATTTACCCACACAGAAGGATATAATATGAACATA  400

seq1  TTTTTTTAAAGAAACATGAGCTACAAACTTATCTGAGGTGATAGTCTTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTAAAGAAACATGAGCTACAAACTTATCTGAGGTGATAGTCTTAA  450

seq1  TAATATCAGGAAGTTAGTTATTTGCCTATAGGTAGTGAGTGTTTGTATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATCAGGAAGTTAGTTATTTGCCTATAGGTAGTGAGTGTTTGTATAA  500

seq1  AATGTACTTGTCATTTTTCAAGTTTTATGAAAAGTAGTTAAGAAATCTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTACTTGTCATTTTTCAAGTTTTATGAAAAGTAGTTAAGAAATCTGT  550

seq1  TTCTAGTTCCAGCTTTGTGCTAAGCCTTTTATATTTCATAGCCTTGTAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGTTCCAGCTTTGTGCTAAGCCTTTTATATTTCATAGCCTTGTAAA  600

seq1  GCTGGCTTAATTCATATTATATAAAGTGTAAAGCATCATTCAGAAGTTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCTTAATTCATATTATATAAAGTGTAAAGCATCATTCAGAAGTTGG  650

seq1  ATAACTTGAATTAAATGGAATAGTTGTGAAACACCCAAATTGCTCTTTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTTGAATTAAATGGAATAGTTGTGAAACACCCAAATTGCTCTTTTC  700

seq1  ATATTATAGTCTGGTATTGTTATA-TTCTGGTAGGGATGAAC-TTAACAG  748
      |||||||||||||||||||||||| ||||||||||||||||| |||||||
seq2  ATATTATAGTCTGGTATTGTTATATTTCTGGTAGGGATGAACTTTAACAG  750

seq1  GA-TTTTAGAATAAAACAGCTGTCATAAGATAGATTTTTAATTTAAAATT  797
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTTAGAATAAAACAGCTGTCATAAGATAGATTTTTAATTTAAAATT  800

seq1  TATTTTTTATTTTTTATTTTTGGTTTTTCAAGACAGGGTTTCTGTGTGTA  847
      ||||||||||||||||||||| | |||| |||||||||||||||||||||
seq2  TATTTTTTATTTTTTATTTTTTGGTTTTTAAGACAGGGTTTCTGTGTGTA  850

seq1  GCCCTGGGTGTCCTGGAACTCAC-TTTGTAGACGAGG  883
      ||||||||||||||||||||||| |||||||||||||
seq2  GCCCTGGGTGTCCTGGAACTCACTTTTGTAGACGAGG  887

seq1: chr14_35677691_35678388
seq2: B6Ng01-033K22.g_70_768 (reverse)

seq1  TTTGTTCTCTTTTCCTCTTTCTCCTCCAGGCTCTCCTAC-AAGTCCTCCC  49
      | ||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TATGTTCTCTTTTCCTCTTTCTCCTCCAGGCTCTCCTACAAAGTCCTCCC  50

seq1  TGCGGTACAGTTCTTAGAACAAGTGCTGCTAGATCACTTGATGTGCTGTG  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGGTACAGTTCTTAGAACAAGTGCTGCTAGATCACTTGATGTGCTGTG  100

seq1  CTTTTTGTTAATGGTCATGCCACTCATGTGACAAGGGGCCCCTTACTGGG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTGTTAATGGTCATGCCACTCATGTGACAAGGGGCCCCTTACTGGG  150

seq1  TGGTTGAGAATTCTACCCTAGGGTCTAGTCCCATCTGGATGTTATTTTTC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGAGAATTCTACCCTAGGGTCTAGTCCCATCTGGATGTTATTTTTC  200

seq1  TCTTTGCTCAATTCCAACTGTGTTCAGGACTCACCTTAGTCTTTCGGTCC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGCTCAATTCCAACTGTGTTCAGGACTCACCTTAGTCTTTCGGTCC  250

seq1  CAAGAAAATTAATTCTCTGCAGCTTTCTATCCCCTTATCTCCACTGCGAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAAAATTAATTCTCTGCAGCTTTCTATCCCCTTATCTCCACTGCGAC  300

seq1  TTTATAAATCCCAGAGGCTAAGACAAGCTCTCCTAAATCTACCATTTACT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAAATCCCAGAGGCTAAGACAAGCTCTCCTAAATCTACCATTTACT  350

seq1  ATATCATCTCCCTACTGACATAGACTATTTCCTATCATAAATAATGGAAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCATCTCCCTACTGACATAGACTATTTCCTATCATAAATAATGGAAT  400

seq1  AATGGTGCTTTTAGAGACCTTCCAACCAGGTGGTTTTATATACTTAACAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGTGCTTTTAGAGACCTTCCAACCAGGTGGTTTTATATACTTAACAG  450

seq1  TTGGACCTCCTTCCTTTTCCTTCTGCGGCATGGCACAGTTCTTTTGATCC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGACCTCCTTCCTTTTCCTTCTGCGGCATGGCACAGTTCTTTTGATCC  500

seq1  ACACCACCACACAGAACACATTTTTGGGTTGCTACCCAAGGTCACTCTGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCACCACACAGAACACATTTTTGGGTTGCTACCCAAGGTCACTCTGA  550

seq1  GGCCAGGTGTGTAAGGTTTCTGCCTCACCAATTCATTTGGGCAAAGGTAC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGGTGTGTAAGGTTTCTGCCTCACCAATTCATTTGGGCAAAGGTAC  600

seq1  ATGCCCCTCTGTGCCAACTTTCCAGGACATTGTATAGGAGCCACGGTTGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCCCTCTGTGCCAACTTTCCAGGACATTGTATAGGAGCCACGGTTGA  650

seq1  ATTTCTAATTGAAGTGGCTCTGGGGTTGGGGTCAAGGATCAGGGAATTC  698
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTAATTGAAGTGGCTCTGGGGTTGGGGTCAAGGATCAGGGAATTC  699