BAC Information

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BAC

Clone NameB6Ng01-034A14
Chromosome18 (Build37)14 (Build37)
Map Location 55,387,421 - 55,387,592112,970,455 - 112,971,499
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG545257, LOC100042489, Zfp608, LOC100043089
Downstream geneLOC667401, LOC667409, LOC629043, LOC100043099, LOC629057, LOC100043104
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-034A14.bB6Ng01-034A14.g
ACCDH862912DH862913
length3141,046
definitionDH862912|Mus musculus domesticus DNA, BAC clone: B6Ng01-034A14, 5' end.DH862913|Mus musculus domesticus DNA, BAC clone: B6Ng01-034A14, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(55,387,421 - 55,387,592)(112,970,455 - 112,971,499)
sequence
agaatgtgagtcacataccttaaattcatccaggtggagtagagacatat
cctgagtacataccttcaattccaaacaatgaaggtaaaattagcttgta
gaaggaagtagccatgtttgaaagtgacatttaattgagggttaggaaat
gtgataaatcagagacagatctaacagatgagtcagggataagatacacc
taactctcataataacagaacaggaaaggcaacttaaggaagcagaaaca
attccagacaaagagggagagagagagagagagagagagagagagagaaa
gagagagagagaga
gaattcatataacattgtacttggtctgaactaacttcctattagttatg
tttctccttcaccctcaatattatcaagagccacatttattaatttacat
ttgaagacttgctgatgttcacttagacagtacaagtctgtaaatggata
ctcaaaagaagtaggtctctttctatgaaacagtaagagaagaaacaact
ttatttaacaaagtgttaatttcttaagagatttgtaaaacaatttcttc
tgtactctttactgacactcaagcattttttattccattttcaggatccc
atttcttcctatgcttcattttaacagcagacacattatcttgtggatat
aacactcgtgctgcaacttcactattcaaggaacaaggcttctgtgttga
gcaaagccagctgtggagctttgagagataaggatgtcttagacgaaata
aaacctttcaagtgcttgaattctgttttaatccttgaaatacattttca
ctctcatctttgtccattacacttagaaaaatttacaaatcttacaatag
ttgttagttggacaaaaaatatctattaaatagtcaccagaacctaatca
cttaaaataataccgtaagagagcctgcagtgactgttagtgtgaactgc
tgtcacattgtgtcctactgttagtgttctcatttatactgtaacattat
cactaaccttattcattatgagcttagatattttagaatttcgagaaccc
acccacaaatgtcacttgcagatcatacatctagaacttcttttgaatat
acattatatatgtaaatgtatattattgaatatgtattataaaactatat
atttgtagtttatattattaaatatatattataaaactatatatatatta
cacatatagtatatatagtatatatgcatatatacatatacatatatata
tgtcttcacagaaggcaaccaatgaacctaaaggcagaaagtcaatgttc
atttgaacaaaaggaatgaaagctgtgtggttctggagagacagac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_55387421_55387592
seq2: B6Ng01-034A14.b_261_368 (reverse)

seq1  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCC  50
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCC  50

seq1  TCTCTCTCTCTGTTTGTTCTTTCTGTCTTCCATTCTTTCTTGCTTTTTGT  100
      ||| | |||    |||   |||||| |||||    |   |||| |||  |
seq2  TCTTTGTCTGGAATTG---TTTCTG-CTTCC---TTAAGTTGCCTTTCCT  93

seq1  GCATGCAGGGAACTTTATTATTGGTATTCAAGAGAGTAGGGAGGGCTCCC  150
      |  | | |  |   |||| |                              
seq2  G--TTCTGTTA---TTATGA------------------------------  108

seq1  TAGGCCCCTCCTGTTATTATGA  172
                            
seq2  ----------------------  108

seq1: chr14_112970455_112971499
seq2: B6Ng01-034A14.g_68_1113

seq1  GAATTCATATAACATTGTACTTGGTCTGAACTAACTTCCTATTAGTTATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATATAACATTGTACTTGGTCTGAACTAACTTCCTATTAGTTATG  50

seq1  TTTCTCCTTCACCCTCAATATTATCAAGAGCCACATTTATTAATTTACAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCCTTCACCCTCAATATTATCAAGAGCCACATTTATTAATTTACAT  100

seq1  TTGAAGACTTGCTGATGTTCACTTAGACAGTACAAGTCTGTAAATGGATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGACTTGCTGATGTTCACTTAGACAGTACAAGTCTGTAAATGGATA  150

seq1  CTCAAAAGAAGTAGGTCTCTTTCTATGAAACAGTAAGAGAAGAAACAACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAAGAAGTAGGTCTCTTTCTATGAAACAGTAAGAGAAGAAACAACT  200

seq1  TTATTTAACAAAGTGTTAATTTCTTAAGAGATTTGTAAAACAATTTCTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTAACAAAGTGTTAATTTCTTAAGAGATTTGTAAAACAATTTCTTC  250

seq1  TGTACTCTTTACTGACACTCAAGCATTTTTTATTCCATTTTCAGGATCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTCTTTACTGACACTCAAGCATTTTTTATTCCATTTTCAGGATCCC  300

seq1  ATTTCTTCCTATGCTTCATTTTAACAGCAGACACATTATCTTGTGGATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTCCTATGCTTCATTTTAACAGCAGACACATTATCTTGTGGATAT  350

seq1  AACACTCGTGCTGCAACTTCACTATTCAAGGAACAAGGCTTCTGTGTTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTCGTGCTGCAACTTCACTATTCAAGGAACAAGGCTTCTGTGTTGA  400

seq1  GCAAAGCCAGCTGTGGAGCTTTGAGAGATAAGGATGTCTTAGACGAAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGCCAGCTGTGGAGCTTTGAGAGATAAGGATGTCTTAGACGAAATA  450

seq1  AAACCTTTCAAGTGCTTGAATTCTGTTTTAATCCTTGAAATACATTTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTTTCAAGTGCTTGAATTCTGTTTTAATCCTTGAAATACATTTTCA  500

seq1  CTCTCATCTTTGTCCATTACACTTAGAAAAATTTACAAATCTTACAATAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCATCTTTGTCCATTACACTTAGAAAAATTTACAAATCTTACAATAG  550

seq1  TTGTTAGTTGGACAAAAAATATCTATTAAATAGTCACCAGAACCTAATCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTAGTTGGACAAAAAATATCTATTAAATAGTCACCAGAACCTAATCA  600

seq1  CTTAAAATAATACCGTAAGAGAGCCTGCAGTGACTGTTAGTGTGAACTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAATAATACCGTAAGAGAGCCTGCAGTGACTGTTAGTGTGAACTGC  650

seq1  TGTCACATTGTGTCCTACTGTTAGTGTTCTCATTTATACTGTAACATTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACATTGTGTCCTACTGTTAGTGTTCTCATTTATACTGTAACATTAT  700

seq1  CACTAACCTTATTCATTATGAGCTTAGATATTTTAGAATTTCGAGAACCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAACCTTATTCATTATGAGCTTAGATATTTTAGAATTTCGAGAACCC  750

seq1  ACCCACAAATGTCACTTGCAGATCATACATCTAGAACTTCTTTTGAATAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACAAATGTCACTTGCAGATCATACATCTAGAACTTCTTTTGAATAT  800

seq1  ACATTATATATGTAAATGTATATTATTGAATATGTATTATAAAACTATAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTATATATGTAAATGTATATTATTGAATATGTATTATAAAACTATAT  850

seq1  ATTTGTAAGTTTATATTATTAAATATATATTATAAAACTATATATATATT  900
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGT-AGTTTATATTATTAAATATATATTATAAAACTATATATATATT  899

seq1  ACACATATAGTATATATAGTATATATGCATATATACATATACATATATAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATATAGTATATATAGTATATATGCATATATACATATACATATATAT  949

seq1  ATGTCTTCACAG-AGGCAACCAATGAACCTACAGGCAGATAGTCAATGTT  999
      |||||||||||| |||||||||||||||||| ||||||| ||||||||||
seq2  ATGTCTTCACAGAAGGCAACCAATGAACCTAAAGGCAGAAAGTCAATGTT  999

seq1  CATGTGAAC-AAAGGAATGAAAGCTGTGT-GTTCTGGAAGAGACAGAC  1045
      ||| ||||| ||||||||||||||||||| ||||||| ||||||||||
seq2  CATTTGAACAAAAGGAATGAAAGCTGTGTGGTTCTGG-AGAGACAGAC  1046