BAC Information

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BAC

Clone NameB6Ng01-034H19
Chromosome14 (Build37)
Map Location 120,737,675 - 120,869,093
singlet/doubletdoublet
Overlap geneMbnl2
Upstream geneHs6st3, EG621324, LOC100043830, Oxgr1, Gabarapl2-ps, LOC100043831
Downstream geneRap2a, LOC668835, LOC668837, Ranbp5, Farp1, LOC100043837, Stk24, Slc15a1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-034H19.bB6Ng01-034H19.g
ACCDH863224DH863225
length804120
definitionDH863224|Mus musculus domesticus DNA, BAC clone: B6Ng01-034H19, 5' end.DH863225|Mus musculus domesticus DNA, BAC clone: B6Ng01-034H19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(120,868,293 - 120,869,093)(120,737,675 - 120,737,794)
sequence
gaattcagttcccaggacctgaagggcagaatagaaaggattcccacagg
ctgtcctttgactctcacacaagcttcatggtattccataccatggacaa
ataaaaatgaacaaattttaaaaagtagtgtatattaaaatttaaaaacc
tggtggtagcttttaactgctgtgtgttgagtcaccccaccttgacattt
gcccccttctagggagtagccgcagaagctgccagactcgcagaagaatc
ctggacaggatgcggtgactcaggatgcgacacagccagacagctgcctg
gtagcacttcttcttaagctcgcaagccccttagaaacaaatctgagtgt
ataggtataagaatatgtgagaagaaagtctgtgggaagatataaaagat
gggactttacacgacctcagcggctaccgcagtttggcttaatgccaaag
aggtgatgtgtcaagttctggccacaccgtgatgagggcacaggacccag
aaacacagtgaccagagtgtgagggaacacgggtcgcatgctttcttggt
gggggttctgtagctaagctagggaagggtcccactagagccgactgggc
aagttagagctgactaggcgagctggctgtttcccttagacagttgttca
tgaaattcaggatctgttgtgtctgggtgtagtcaacgacttgttttcct
gcagttcctgagtagctgacttcctggaaccactgagctccatgtagggc
cttggattgtgggggcagaagttttgaatagatatatagcatgggttctc
taaa
caatggaaataatatccttagggacagtgttatgcagaagtgattgctag
ggagggagctgccttcaatgtgttgctttcagggctgagaccttgaggag
ggggagtgggaggaggaaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_120868293_120869093
seq2: B6Ng01-034H19.b_41_844 (reverse)

seq1  TTTAGAG-ACCCATGCTATATATCTATTCAAAAC-TCTG-CCCCACAATC  47
      ||||||| |||||||||||||||||||||||||| |||| ||||||||||
seq2  TTTAGAGAACCCATGCTATATATCTATTCAAAACTTCTGCCCCCACAATC  50

seq1  CAAGGCCCTACATGGAGCTCAGT-GTTCCAGGAAGTCAGCTACTCAGGAA  96
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CAAGGCCCTACATGGAGCTCAGTGGTTCCAGGAAGTCAGCTACTCAGGAA  100

seq1  CTGCA-GAAAACAAGTCGTTGACCTACACCCAGACAACAACAGATCCTGA  145
      ||||| |||||||||||||||| |||||||||||| ||||||||||||||
seq2  CTGCAGGAAAACAAGTCGTTGA-CTACACCCAGAC-ACAACAGATCCTGA  148

seq1  ATTTCATGAACAACTGTCTAAGGGAAACAGCCAGCTCGCCTAGTCAGCTC  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCATGAACAACTGTCTAAGGGAAACAGCCAGCTCGCCTAGTCAGCTC  198

seq1  TAACTTGCCCAGTCGGCTCTAGTGGGACCCTTCCCTAGCCTTAGCTACAG  245
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TAACTTGCCCAGTCGGCTCTAGTGGGACCCTTCCCTAG-CTTAGCTACAG  247

seq1  AACCCCCACCAAG-AAGCATGCGACCCGTGTTCCCTCACACTCTGGTCAC  294
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  AACCCCCACCAAGAAAGCATGCGACCCGTGTTCCCTCACACTCTGGTCAC  297

seq1  TGTGTTTCTGGGTCCTGTGCCCTCATCACGGTGTGGCCAGAACTTGACAC  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTCTGGGTCCTGTGCCCTCATCACGGTGTGGCCAGAACTTGACAC  347

seq1  ATCACCTCTTTGGCATTAAGCCAAACTGCGGTAGCCGCTGAGGTCGTGTA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACCTCTTTGGCATTAAGCCAAACTGCGGTAGCCGCTGAGGTCGTGTA  397

seq1  AAGTCCCATCTTTTATATCTTCCCACAGACTTTCTTCTCACATATTCTTA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCCCATCTTTTATATCTTCCCACAGACTTTCTTCTCACATATTCTTA  447

seq1  TACCTATACACTCAGATTTGTTTCTAAGGGGCTTGCGAGCTTAAGAAGAA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTATACACTCAGATTTGTTTCTAAGGGGCTTGCGAGCTTAAGAAGAA  497

seq1  GTGCTACCAGGCAGCTGTCTGGCTGTGTCGCATCCTGAGTCACCGCATCC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTACCAGGCAGCTGTCTGGCTGTGTCGCATCCTGAGTCACCGCATCC  547

seq1  TGTCCAGGATTCTTCTGCGAGTCTGGCAGCTTCTGCGGCTACTCCCTAGA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCAGGATTCTTCTGCGAGTCTGGCAGCTTCTGCGGCTACTCCCTAGA  597

seq1  AGGGGGCAAATGTCAAGGTGGGGTGACTCAACACACAGCAGTTAAAAGCT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGGCAAATGTCAAGGTGGGGTGACTCAACACACAGCAGTTAAAAGCT  647

seq1  ACCACCAGGTTTTTAAATTTTAATATACACTACTTTTTAAAATTTGTTCA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCAGGTTTTTAAATTTTAATATACACTACTTTTTAAAATTTGTTCA  697

seq1  TTTTTATTTGTCCATGGTATGGAATACCATGAAGCTTGTGTGAGAGTCAA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATTTGTCCATGGTATGGAATACCATGAAGCTTGTGTGAGAGTCAA  747

seq1  AGGACAGCCTGTGGGAATCCTTTCTATTCTGCCCTTCAGGTCCTGGGAAC  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACAGCCTGTGGGAATCCTTTCTATTCTGCCCTTCAGGTCCTGGGAAC  797

seq1  TGAATTC  801
      |||||||
seq2  TGAATTC  804

seq1: chr14_120737675_120737794
seq2: B6Ng01-034H19.g_76_195

seq1  CAATGGAAATAATATCCTTAGGGACAGTGTTATGCAGAAGTGATTGCTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGAAATAATATCCTTAGGGACAGTGTTATGCAGAAGTGATTGCTAG  50

seq1  GGAGGGAGCTGCCTTCAATGTGTTGCTTTCAGGGCTGAGACCTTGAGGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGAGCTGCCTTCAATGTGTTGCTTTCAGGGCTGAGACCTTGAGGAG  100

seq1  GGGGAGTGGGAGGAGGAAGA  120
      ||||||||||||||||||||
seq2  GGGGAGTGGGAGGAGGAAGA  120