BAC Information

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BAC

Clone NameB6Ng01-034I19
Chromosome14 (Build37)
Map Location 123,791,859 - 123,792,832
singlet/doubletsinglet
Overlap geneVgcnl1
Upstream geneClybl, EG328479, EG432907, Zic5, Zic2, ENSMUSG00000075465, LOC668847, Pcca, BC006662, 4930594M22Rik, Tmtc4
Downstream geneItgbl1, LOC668700, Fgf14
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-034I19.bB6Ng01-034I19.g
ACCDH863270DH863271
length1,021976
definitionDH863270|Mus musculus domesticus DNA, BAC clone: B6Ng01-034I19, 5' end.DH863271|Mus musculus domesticus DNA, BAC clone: B6Ng01-034I19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttctttagctctctaccctgtttttttttatatagggttattt
gatttactggggtctatcttgttgtgttctttatatatattgcatattag
tcccctatctgacttaggattggtaaagatcctttcccaagctgttggtg
acctttttgttttatgaaagcgtcttttgtcttacagaagctttgcaatt
ttatgaggtcctatttgtcgatcctatttgtctccatcttacagcacaag
cctttgctgttctgttcaggaatttttcccctgtgcacatatctttgagg
tttttccccactttctcctctataagttttaatgtttctggttttatgtg
gacttccttgatccacttagacttgagctttgtttaaggagataagaatg
gatcaatttgcattcttctacatgataaccaccagttgtgccagcacaat
ttgtttaaaatgctgccttttttccattggatggttttagctcttttgtc
aaagatcaagtgaccataccagtatgggttaatttctgagtcttcaattc
tattccattgatctacctgtctgtctctgtaccagtaccatgcagttttt
atcataattgctctgtagtacaacttgagttcaggcatggtgattccacc
agagggttcttttattgttcacaatagtttttactatcctagattttttg
ttattccacacgaattttgcaaagttcactttctaacttggtgaagattt
gagttggaattttgatggggattgcattgaatctaatagattgctttcag
caagatagtgatttttactatactaatcctgccaatccgtgagcatggga
gatctttccatcttctgagatctttaatttctttcttcgagacttgaagt
tctcatcatacgatctttcacttccttagagtacacacacgtatttaata
ttatttcgtggctatgtgtaaagggaatggatcccttatatcttcctcag
cgcatattattgagagagagg
gaattcaactagagtcaatatagtttagatctttagaaatataggctttt
ggtccaaactacatcgtttccattcttagatttaaaatttgtttattgtt
taaccttcagccttttatgttccattccctcatctgttagatggatataa
tagtatctgtactgaagcagcagaattaaggaatgtgtaatttgaaatgt
taggaaagtaatcttttaacatatcttttctattctactctatctggggt
aaaatattttctgcaaatgatgcaacctcaaaggctaagatcactggaaa
aaggaaaaacaatgaatattttaaaatgatacaatgttttaaaaagctac
atttatttataactgtataattttgtgtgtgtctgtgcatgcatgtgtgt
gcttatgtatgcatgtgtgtacatatcttttcgagtttatgtatcacata
tttgcaagagcccacagagcagagaagagtgggttgaattccttggagca
ggagttataggagtttgtgagctgctacatgggtcatggtgcctatgtaa
gaacccaagtactcacaactacttgaccatctctctagtgctgtgtgata
cagttttaaaactaatgaaaacacaaaatattctttgtgcaaagaaagga
agaaaataaacaagaaacattttaatttagaatgataattttttgatcca
atggattttaaatatgaaactaaagggatttggggtgtgaaatttattag
atggattaatttaaatatgtagttttcagtccaatcatgaataaacaatc
ccctaaagccactatttaaaatggaatcactactttattttccttggagt
tttcagtgctgaaatgtctttaaatttataagaagatgctaaattgaggt
aagaacaattggataataaatcagatgtacagagttcaaaaaaaaaaaaa
aatccatggtctttatttattaactt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_123791859_123792832
seq2: B6Ng01-034I19.g_69_1044

seq1  GAATTCAACTAGAGTCAATATAGTTTAGATCTTTAGAAATATAGGCTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACTAGAGTCAATATAGTTTAGATCTTTAGAAATATAGGCTTTT  50

seq1  GGTCCAAACTACATCGTTTCCATTCTTAGATTTAAAATTTGTTTATTGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCAAACTACATCGTTTCCATTCTTAGATTTAAAATTTGTTTATTGTT  100

seq1  TAACCTTCAGCCTTTTATGTTCCATTCCCTCATCTGTTAGATGGATATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTTCAGCCTTTTATGTTCCATTCCCTCATCTGTTAGATGGATATAA  150

seq1  TAGTATCTGTACTGAAGCAGCAGAATTAAGGAATGTGTAATTTGAAATGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTATCTGTACTGAAGCAGCAGAATTAAGGAATGTGTAATTTGAAATGT  200

seq1  TAGGAAAGTAATCTTTTAACATATCTTTTCTATTCTACTCTATCTGGGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAAAGTAATCTTTTAACATATCTTTTCTATTCTACTCTATCTGGGGT  250

seq1  AAAATATTTTCTGCAAATGATGCAACCTCAAAGGCTAAGATCACTGGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATTTTCTGCAAATGATGCAACCTCAAAGGCTAAGATCACTGGAAA  300

seq1  AAGGAAAAACAATGAATATTTTAAAATGATACAATGTTTTAAAAAGCTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAAAACAATGAATATTTTAAAATGATACAATGTTTTAAAAAGCTAC  350

seq1  ATTTATTTATAACTGTATAATTTTGTGTGTGTCTGTGCATGCATGTGTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTTATAACTGTATAATTTTGTGTGTGTCTGTGCATGCATGTGTGT  400

seq1  GCTTATGTATGCATGTGTGTACATATCTTTTCGAGTTTATGTATCACATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTATGTATGCATGTGTGTACATATCTTTTCGAGTTTATGTATCACATA  450

seq1  TTTGCAAGAGCCCACAGAGCAGAGAAGAGTGGGTTGAATTCCTTGGAGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCAAGAGCCCACAGAGCAGAGAAGAGTGGGTTGAATTCCTTGGAGCA  500

seq1  GGAGTTATAGGAGTTTGTGAGCTGCTACATGGGTCATGGTGCCTATGTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTATAGGAGTTTGTGAGCTGCTACATGGGTCATGGTGCCTATGTAA  550

seq1  GAACCCAAGTACTCACAACTACTTGACCATCTCTCTAGTGCTGTGTGATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCCAAGTACTCACAACTACTTGACCATCTCTCTAGTGCTGTGTGATA  600

seq1  CAGTTTTAAAACTAATGAAAACACAAAATATTC-TTGTGC-AAGAAAGGA  648
      ||||||||||||||||||||||||||||||||| |||||| |||||||||
seq2  CAGTTTTAAAACTAATGAAAACACAAAATATTCTTTGTGCAAAGAAAGGA  650

seq1  AGAAAATAAACAAGAAACATTTTAATTTAGAATGATAA-TTTTTGATCCA  697
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AGAAAATAAACAAGAAACATTTTAATTTAGAATGATAATTTTTTGATCCA  700

seq1  ATGGATTTTAAATATGAAACTAAAGGGATTTGGGGTGTGAAA-TTAATAG  746
      |||||||||||||||||||||||||||||||||||||||||| ||| |||
seq2  ATGGATTTTAAATATGAAACTAAAGGGATTTGGGGTGTGAAATTTATTAG  750

seq1  ATGGATTAA-TTAAATATGTAG-TTTCAGTCCAATCATGAATAAACAATC  794
      ||||||||| |||||||||||| |||||||||||||||||||||||||||
seq2  ATGGATTAATTTAAATATGTAGTTTTCAGTCCAATCATGAATAAACAATC  800

seq1  CCCTAAAGCCACTA-TTAAAATGGAATCACTACTTTATTTTCCTTGGAGT  843
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CCCTAAAGCCACTATTTAAAATGGAATCACTACTTTATTTTCCTTGGAGT  850

seq1  TTTCAGTGCTGAAAATGTCTTTAAATTTATAAAGAAGATGCCTAAATTGG  893
      ||||||||||| |||||||||||||||||| ||||||||| ||||||| |
seq2  TTTCAGTGCTG-AAATGTCTTTAAATTTAT-AAGAAGATG-CTAAATT-G  896

seq1  AGGTAAGAACAATTGGATAATAAATCAGATGTACAGAGTTTCAAAAAATA  943
      |||||||||||||||||||||||||||||||||||||| ||||||||| |
seq2  AGGTAAGAACAATTGGATAATAAATCAGATGTACAGAG-TTCAAAAAAAA  945

seq1  AAAAAAAATCATGTTCTTTATTTATCAACTT  974
      |||||||  |||| ||||||||||| |||||
seq2  AAAAAAATCCATGGTCTTTATTTATTAACTT  976