BAC Information

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BAC

Clone NameB6Ng01-034L13
Chromosome14 (Build37)
Map Location 19,714,626 - 19,715,523
singlet/doubletsinglet
Overlap geneUbe2e2
Upstream geneThrb, LOC627608, Nr1d2, LOC632287, Rpl15, Nkiras1, Ube2e1, LOC627717, LOC238963
Downstream geneLOC627741, LOC100042299, LOC675069, LOC100042322, LOC632470, EG632477, EG632498, EG667341, LOC667344, LOC619996, EG434616, LOC675165, 1700110I01Rik, EG664814, LOC100039452, LOC100038983, LOC100039441, EG432825, LOC673583, EG664855, Nid2, 2700060E02Rik, LOC100039534, Gng2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-034L13.bB6Ng01-034L13.g
ACCDH863391DH863392
length9521,107
definitionDH863391|Mus musculus domesticus DNA, BAC clone: B6Ng01-034L13, 5' end.DH863392|Mus musculus domesticus DNA, BAC clone: B6Ng01-034L13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccccaaaagaacccacacttctctcccagccactatggttacaaa
ttactcatttcaaaaagtaatttcctgataaactcaacaactctaagcaa
taagccaatatattacaatatattttgaactactgttaccttatcaaggc
tgtttctctagacagaaaggattatagaaagaattgccatttaaataatt
gtaaggtgtcctagtgaattaaatgacagcaattctaaaattctccaaaa
cctgtaatcgtggtatgtattacatttctgtcttgagtaaggaagacagc
tagtactgtccctaggctgaggaaaaaaaggaaaaagtatcaatacttca
cccttagagtgtacctgtcacatgatagtcttaggccactaagagtaaat
taagcccctcacaggctgtagcacttggagagtgggccccgtgccttgac
tgggcagcagagtggagctggctcttgaggtgtgggtgcaggcaagccag
cccagagtgcatgagaacctgagacctgaccctgactccagccaatggtg
gaactgcatggcctagccagagcagtgctggacagctcaccttggtgttg
tagataagggaggactggtacactgaccagttcagctaccatccaggccc
agatgtaggactctgagttgacccaccctaaaatctttatcatctgagaa
cagttgagatgcagaaagggccagtcctgctgttccaaagctgcaagatc
tccatgacacaggtcaacaacaagataaccaaaggagtcctggtcctcac
caatacatattgatggtgtcacagaagccagaaacctcaaaccagagacc
atgactcactgtatgacattggaaagtatgtggaagagggataagcatgg
gacacactgtgacatactaaagctttcatgatgagatgtttctatgcttt
gt
cggaatttttgatcttagccattctgactggtgtgaggtagaatctcagg
attggtttgatttgcatttcccttatgatcaatgatgttgaacatttttt
caggtgcttctttgtttcgctctgtgccccattttttaatagggttattt
gactttctggagtccaacttcttgagttctttatatatgttggatattag
tcccctatctgatctaggattggtaaagatcctttcccagtctgttggtg
gcctttttgtcttattgatagtgtcttttgccttacagaagccttgtaat
tttatgaggtcccatttgttgattctcgatcttacagcacaagctgttgc
tgttctattcaggaattttttcccctgtgcccatatcttcgagacttttc
ctcactttctcctctataagtttcagtgtttctggttttatgtggagttc
cttgatccacttagatttgaccttcgtacaaggagataagattatttcct
gccttctactcctcttgggtgaatttgcttccttttgttctagagctttt
aaatgtgctgtcaagctgctagtatgtgctctctctagtttcttttcgga
ggcactcagagctatgagtattcctcttaggaacgctttcattgtgtccc
acaagtttggatatgttgtggcttcattttcattaaactctaaaaagtct
tttatttctttctttatttctttcttgaccaaggtatcattgagtagagt
gttgttcagctaccacgttgaaatgttagctttctattatttatgttgtt
attgaagatcagccttagtcccatgatgatatgataggatgcatgggata
tttcaatagtttgtatctgttgaggacttttttgttgaccatttatatgg
tcaattttggagaagtaccatgaggtgctgagaagtatatcctttgttaa
gataaaacgttctgtagatatctgtgaaaccatatgtttctataaattcg
ttactttaaatagtccgtgtcattctgtttccaggatccctccatggata
aagggggggtttgaatttcccccatatatagtatggggtccaaggtatct
tgactca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_19714626_19715523
seq2: B6Ng01-034L13.b_51_943

seq1  GAATTCCCCAAAAGAACCCACACTTCTCTCCCAGCCACTATGGTTACAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCCAAAAGAACCCACACTTCTCTCCCAGCCACTATGGTTACAAA  50

seq1  TTACTCATTTCAAAAAGTAATTTCCTGATAAACTCAACAACTCTAAGCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTCATTTCAAAAAGTAATTTCCTGATAAACTCAACAACTCTAAGCAA  100

seq1  TAAGCCAATATATTACAATATATTTTGAACTACTGTTACCTTATCAAGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCCAATATATTACAATATATTTTGAACTACTGTTACCTTATCAAGGC  150

seq1  TGTTTCTCTAGACAGAAAGGATTATAGAAAGAATTGCCATTTAAATAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCTCTAGACAGAAAGGATTATAGAAAGAATTGCCATTTAAATAATT  200

seq1  GTAAGGTGTCCTAGTGAATTAAATGACAGCAATTCTAAAATTCTCCAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGGTGTCCTAGTGAATTAAATGACAGCAATTCTAAAATTCTCCAAAA  250

seq1  CCTGTAATCGTGGTATGTATTACATTTCTGTCTTGAGTAAGGAAGACAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTAATCGTGGTATGTATTACATTTCTGTCTTGAGTAAGGAAGACAGC  300

seq1  TAGTACTGTCCCTAGGCTGAGGAAAAAAAGGAAAAAGTATCAATACTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTACTGTCCCTAGGCTGAGGAAAAAAAGGAAAAAGTATCAATACTTCA  350

seq1  CCCTTAGAGTGTACCTGTCACATGATAGTCTTAGGCCACTAAGAGTAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTAGAGTGTACCTGTCACATGATAGTCTTAGGCCACTAAGAGTAAAT  400

seq1  TAAGCCCCTCACAGGCTGTAGCACTTGGAGAGTGGGCCCCGTGCCTTGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCCCCTCACAGGCTGTAGCACTTGGAGAGTGGGCCCCGTGCCTTGAC  450

seq1  TGGGCAGCAGAGTGGAGCTGGCTCTTGAGGTGTGGGTGCAGGCAAGCCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCAGCAGAGTGGAGCTGGCTCTTGAGGTGTGGGTGCAGGCAAGCCAG  500

seq1  CCCAGAGTGCATGAGAACCTGAGACCTGACCCTGACTCCAGCCAATGGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGAGTGCATGAGAACCTGAGACCTGACCCTGACTCCAGCCAATGGTG  550

seq1  GAACTGCATGGCCTAGCCAGAGCAGTGCTGGACAGCTCACCTTGGTGTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGCATGGCCTAGCCAGAGCAGTGCTGGACAGCTCACCTTGGTGTTG  600

seq1  TAGATAAGGGAGGACTGGTACACTGACCAGTTCAGCTACCATCCAGGCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATAAGGGAGGACTGGTACACTGACCAGTTCAGCTACCATCCAGGCCC  650

seq1  AGATGTAGGACTCTGAGTTGACCCACCCTAAAATCTTTATCATCTGAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTAGGACTCTGAGTTGACCCACCCTAAAATCTTTATCATCTGAGAA  700

seq1  CAGTTGAGATGCAGGAAAGGGCCAGTCCTGCTGTTCCAAAGCTGCAAGAT  750
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CAGTTGAGATGCA-GAAAGGGCCAGTCCTGCTGTTCCAAAGCTGCAAGAT  749

seq1  CTCCATGACACAGGTCAACAACAAGATAACCAAAGGAGTCCTGGTCCTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATGACACAGGTCAACAACAAGATAACCAAAGGAGTCCTGGTCCTCA  799

seq1  CCAATACAATATTGATGGTGTCACAGAAGCCAGAAACCTCAAACCAGAGA  850
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATAC-ATATTGATGGTGTCACAGAAGCCAGAAACCTCAAACCAGAGA  848

seq1  CCAATGACTCACTGTAATGACATTGGAAAGTATGTGGACAGAGGGATA  898
      || |||||||||||| |||||||||||||||||||||| |||||||||
seq2  CC-ATGACTCACTGT-ATGACATTGGAAAGTATGTGGA-AGAGGGATA  893