BAC Information

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BAC

Clone NameB6Ng01-035H01
Chromosome14 (Build37)
Map Location 113,927,076 - 113,928,104
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043509, Tpm3-rs7, LOC100043510
Downstream geneLOC382947, LOC668791, LOC100043821
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-035H01.bB6Ng01-035H01.g
ACCDH863901DH863902
length1,0121,013
definitionDH863901|Mus musculus domesticus DNA, BAC clone: B6Ng01-035H01, 5' end.DH863902|Mus musculus domesticus DNA, BAC clone: B6Ng01-035H01, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatttatttgtaatgtatttcttggagcagaatttattctcctag
tactatactcagttttatataagccaaaactattttcctaaaataatgat
gacattttatgtacataggcataaatcccatgaattgtattggtaatatt
ttatttacttatgagatttaatatagttagtcataaaatcaatgttaaaa
tatttatgtagaatttaaagtaaatagaatataaatgtgatgatagatca
cagtttaattattctgtctatgtgcataatgtatttattttattgagttg
gcagtaatttacgtttctggcataaacatgtaatttaaacactgcatcag
tgtttttttccccaatttttgattacttagaaaggaaaaaagtgcattaa
gggttacacattcccatcacgagtctttgctgacatgatctatttacgtt
caataattcacctcttctgtgtcactcacaccaacttggcatttgtgtct
cttagttacttgacattcatcaagccttgttctcttcttgggcagagatt
gaagaaagaaaatactcataaatacttgacactgtggtgtgaatactcaa
agatctgcattactataaggaaaatgctgcgtgcctcagacatcagatgc
aaagctcttacacaaatcataggtgaggaaatacgtagggaaagtctggg
atataaccatggagatggtaacacagggaccagtgaaaagaagcattctc
tgggagtgctgtatttggctttacttgtctaaccattctcatgttaaaac
ctccgttgtctttatacttgatctcatggagaaatgaaaatgcaaacttt
tcactgtaaagaatcctcacagctgcctttttgatctacattagcccagt
gactacagcagtgataccctcacacatacacacaatacacactcacacca
ataagatcttactacagagacattcaaactgatgttacagcactgaattg
tcaggagagaac
gaattctcacccgaggaataccaaaaggctgagaaacacctgaaaaaata
ttcaacatccttaatcatcagagaaatgcaaatcaaacaaccctgagatt
ccatctcacaccagtcagaatggctaagatcaaaaattcaggtgacagca
gatgctggcgaggatgtggagaaagaggaacactcctcagttgttggtgg
gattgcaagcttgtacaaccactctggaaatcagtctggcggttcctcag
aaaattggacatagtactacaggaggatcccgcaatacctctcctggcca
tatatccggaagatgtcccaaccggtaagaaggacacatgctccactatg
ttcatagcagccttatttataatagccagaagctggaaagaacccagatg
tccctcaacagaggaatggatacaaaaattgtggtacatttacacaatgg
agttctactcagctattaaaaagaatgaattcatgaaattcctaggcaaa
tggttggacctggagggcatcatcctgagtgaggtaacccaatcacaaaa
gaactcaaatgaaatatactcactgataagtggatattaacccagaaact
tagtatagcgagatataaggtacaatatgtaaaacatatgaaactgaaga
agaacgaagaccaaagtgtgggacacttttgctcattcttagaattggaa
acaatcaccccatggaaggagttacagagacagagtttggagctcataca
aagggttgttccatctagagactgccatatccaggatccatcctataatt
agcctccaagcaaatgacaccattgcatacactacagcctttggtgcaag
ggaggtgatattgctgttccttgggagacttaggtcgggcctagcaccca
gagtggatgctctacagtccactattggatggatcacaaggcccccatgg
aggactagaaagttcccagggactaaagattctgcacccgtattgagagg
aacactttatgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_113927076_113928104
seq2: B6Ng01-035H01.b_37_1048 (reverse)

seq1  GTTCTCTCCCTGACAATTCAGTGCTGTAAACATCAGTTTTGAAATGTCTT  50
      ||||||| ||||||||||||||||||| |||||||||||   |||||| |
seq2  GTTCTCT-CCTGACAATTCAGTGCTGT-AACATCAGTTT--GAATGTC-T  45

seq1  CTGTAAGTAAAGATCTTTATTGGTGTGAGTGTGTATTTGTGTGTATGTGT  100
      |||| ||| |||||| ||||||||||||||||||| ||||||||||||||
seq2  CTGT-AGT-AAGATC-TTATTGGTGTGAGTGTGTA-TTGTGTGTATGTGT  91

seq1  GGAGGGGTATTCACTGCTGTAGTCACTGGGGCCTAATGTTAGATCAAAGA  150
      |   ||||| ||||||||||||||||||||  |||||| ||||||||| |
seq2  G--AGGGTA-TCACTGCTGTAGTCACTGGG--CTAATG-TAGATCAAAAA  135

seq1  GGCAGCTGTGAGGATTCTTTTACAGTGGAAAAGTTTGCATTTTCATTTCT  200
      ||||||||||||||||| |||||||| |||||||||||||||||||||||
seq2  GGCAGCTGTGAGGATTC-TTTACAGT-GAAAAGTTTGCATTTTCATTTCT  183

seq1  CCATGAGATCAAGTATAAAGACAACGGAGGTTTTAACATGAGAATGGTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGAGATCAAGTATAAAGACAACGGAGGTTTTAACATGAGAATGGTTA  233

seq1  GACAAGTAAAGCCAAATACAGCACTCCCAGAGAATGCTTCTTTTCACTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAGTAAAGCCAAATACAGCACTCCCAGAGAATGCTTCTTTTCACTGG  283

seq1  TCCCTGTGTTACCATCTCCATGGTTATATCCCAGACTTTCCCTACGTATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGTGTTACCATCTCCATGGTTATATCCCAGACTTTCCCTACGTATT  333

seq1  TCCTCACCTATGATTTGTGTAAGAGCTTTGCATCTGATGTCTGAGGCACG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCACCTATGATTTGTGTAAGAGCTTTGCATCTGATGTCTGAGGCACG  383

seq1  CAGCATTTTCCTTATAGTAATGCAGATCTTTGAGTATTCACACCACAGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATTTTCCTTATAGTAATGCAGATCTTTGAGTATTCACACCACAGTG  433

seq1  TCAAGTATTTATGAGTATTTTCTTTCTTCAATCTCTGCCCAAGAAGAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTATTTATGAGTATTTTCTTTCTTCAATCTCTGCCCAAGAAGAGAA  483

seq1  CAAGGCTTGATGAATGTCAAGTAACTAAGAGACACAAATGCCAAGTTGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCTTGATGAATGTCAAGTAACTAAGAGACACAAATGCCAAGTTGGT  533

seq1  GTGAGTGACACAGAAGAGGTGAATTATTGAACGTAAATAGATCATGTCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTGACACAGAAGAGGTGAATTATTGAACGTAAATAGATCATGTCAG  583

seq1  CAAAGACTCGTGATGGGAATGTGTAACCCTTAATGCACTTTTTTCCTTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGACTCGTGATGGGAATGTGTAACCCTTAATGCACTTTTTTCCTTTC  633

seq1  TAAGTAATCAAAAATTGGGGAAAAAAACACTGATGCAGTGTTTAAATTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTAATCAAAAATTGGGGAAAAAAACACTGATGCAGTGTTTAAATTAC  683

seq1  ATGTTTATGCCAGAAACGTAAATTACTGCCAACTCAATAAAATAAATACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTATGCCAGAAACGTAAATTACTGCCAACTCAATAAAATAAATACA  733

seq1  TTATGCACATAGACAGAATAATTAAACTGTGATCTATCATCACATTTATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGCACATAGACAGAATAATTAAACTGTGATCTATCATCACATTTATA  783

seq1  TTCTATTTACTTTAAATTCTACATAAATATTTTAACATTGATTTTATGAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATTTACTTTAAATTCTACATAAATATTTTAACATTGATTTTATGAC  833

seq1  TAACTATATTAAATCTCATAAGTAAATAAAATATTACCAATACAATTCAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTATATTAAATCTCATAAGTAAATAAAATATTACCAATACAATTCAT  883

seq1  GGGATTTATGCCTATGTACATAAAATGTCATCATTATTTTAGGAAAATAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATTTATGCCTATGTACATAAAATGTCATCATTATTTTAGGAAAATAG  933

seq1  TTTTGGCTTATATAAAACTGAGTATAGTACTAGGAGAATAAATTCTGCTC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGCTTATATAAAACTGAGTATAGTACTAGGAGAATAAATTCTGCTC  983

seq1  CAAGAAATACATTACAAATAAATGAATTC  1029
      |||||||||||||||||||||||||||||
seq2  CAAGAAATACATTACAAATAAATGAATTC  1012