BAC Information

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BAC

Clone NameB6Ng01-036A07
Chromosome14 (Build37)
Map Location 59,272,329 - 59,403,362
singlet/doubletdoublet
Overlap genenone
Upstream geneXpo4, Lats2, Sap18, F630043A04Rik, Mrp63, Zdhhc20, Efha1, LOC668160, Fgf9, LOC100043554
Downstream geneEG668177, EG668182, 1700129C05Rik, EG380907, Rcbtb1, EG628693, Phf11, EG236451, D14Ertd668e, EG628705, Setdb2, Cab39l, Cdadc1, Tmem46, Atp8a2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-036A07.bB6Ng01-036A07.g
ACCDH864329DH864330
length958835
definitionDH864329|Mus musculus domesticus DNA, BAC clone: B6Ng01-036A07, 5' end.DH864330|Mus musculus domesticus DNA, BAC clone: B6Ng01-036A07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(59,272,329 - 59,273,299)(59,402,525 - 59,403,362)
sequence
gaattcaagtgatttcagttaagaataagtcaatgcttaaatcattgatt
tattggtcaatgctaaaatcttatcccagtctatgtggttggagactgag
agacactgaggtgttcgtttgtgagaacagaggagaaaaatcgagcttat
tcagaccctttgccaagaccagagatagagcaggaagaagagtgtctgcc
cgaagctacggaccaggaaggcttctgacagttcaattttctttgtgcga
atcctgccatttaaatgaggaaagtcctaactagttgatgtttgagacta
ggcaggacctgggtatctaagctagctagctgtcataccaggtcatggtt
agtttgagtctatttagtctcattttcttcctccacaggagtcaactatt
tcctgttttaatttttatgtagatctatatttatctatttatctatttat
ttatgcatctgtacatgtttatatgtgtcatgtgcgtgtgcttgcaggca
cccaggaagtccaggagaagatggcagattccctggaggagcactgatag
gtgaatgtgagcagccggatgttggtgctgggaacaggattctggttctc
tgcagcagcagcgagtgctcttaatcactgatccttctttccagctttta
ttttttctcctccccccctcctcttcttcctcttcctcttcctcctcccc
ctccccctccctcctcctccatttcctctcctccttttctctctctcctt
tttttaaggggtggcttttctagacaggactttttctgtgtagctttggc
tgtcttggaactggcctgtagaccaggctgccctcaaactcacaagaatt
tcctgctctctggctcccaggtgctgggattaggttactgcaccctagca
acctgcttctcaatcaatttatgtataatgctaaaggaagctcagaccag
cctgcttt
gaattccagtgcaggcatgccactattttagatctgtatccccagttccc
agtctctcagtaggcaagagaggtttttatttgcattgatggggacaatg
tgtgccttttaaaattttccatacctcggcttcagcttgggaactggggg
tcaaagcatctggaagtacctgcatgtacagaagtcaggcttactgttgg
aaatgaagaaagccttccaataaagatcagagggtgaatggggtgatgct
gagtcttagcagtcatctaattacccacttggggaggcagagaaggctga
gcaaggggaggactggaggaggggcagagatatgccaagaaggaggagga
aatacaatcgaactcacccagcctctctaaggcccgtggcatatgagaag
gaaatctacagccaccactgaacttgctcaaattcttctgtgcaactcag
ttattaagaatactgctgataagtggatactagcccaaaagctccaaata
accaggatacaactcacagaccacatgaagctcgaaaagaaagaccaaag
tgtgggtgcttccatccttcttagaaggagaacaaaatgctcacaggagc
aaatatggagataagtgtagatcagaaggaaaggccatccagagaacaac
aatatcaaccaaccagaccctctacaactcccagggactaagccatcaac
aaagcagtacacatggctccagctgcatatgtagcagaggatggccttgt
caggcatcaatggaagggaggtccttggtcctaagaaggcttcattaagt
gtagggaatggagggcagggaggtgggaatggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_59272329_59273299
seq2: B6Ng01-036A07.b_48_1005

seq1  GAATTCAAGTGATTTCAGTTAAGAATAAGTCAATGCTTAAATCATTGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGTGATTTCAGTTAAGAATAAGTCAATGCTTAAATCATTGATT  50

seq1  TATTGGTCAATGCTAAAATCTTATCCCAGTCTATGTGGTTGGAGACTGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGTCAATGCTAAAATCTTATCCCAGTCTATGTGGTTGGAGACTGAG  100

seq1  AGACACTGAGGTGTTCGTTTGTGAGAACAGAGGAGAAAAATCGAGCTTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACTGAGGTGTTCGTTTGTGAGAACAGAGGAGAAAAATCGAGCTTAT  150

seq1  TCAGACCCTTTGCCAAGACCAGAGATAGAGCAGGAAGAAGAGTGTCTGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGACCCTTTGCCAAGACCAGAGATAGAGCAGGAAGAAGAGTGTCTGCC  200

seq1  CGAAGCTACGGACCAGGAAGGCTTCTGACAGTTCAATTTTCTTTGTGCGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAGCTACGGACCAGGAAGGCTTCTGACAGTTCAATTTTCTTTGTGCGA  250

seq1  ATCCTGCCATTTAAATGAGGAAAGTCCTAACTAGTTGATGTTTGAGACTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGCCATTTAAATGAGGAAAGTCCTAACTAGTTGATGTTTGAGACTA  300

seq1  GGCAGGACCTGGGTATCTAAGCTAGCTAGCTGTCATACCAGGTCATGGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGACCTGGGTATCTAAGCTAGCTAGCTGTCATACCAGGTCATGGTT  350

seq1  AGTTTGAGTCTATTTAGTCTCATTTTCTTCCTCCACAGGAGTCAACTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGAGTCTATTTAGTCTCATTTTCTTCCTCCACAGGAGTCAACTATT  400

seq1  TCCTGTTTTAATTTTTATGTAGATCTATATTTATCTATTTATCTATTTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTTTTAATTTTTATGTAGATCTATATTTATCTATTTATCTATTTAT  450

seq1  TTATGCATCTGTACATGTTTATATGTGTCATGTGCGTGTGCTTGCAGGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGCATCTGTACATGTTTATATGTGTCATGTGCGTGTGCTTGCAGGCA  500

seq1  CCCAGGAAGTCCAGGAGAAGATGGCAGATTCCCTGGAGGAGCACTGATAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGAAGTCCAGGAGAAGATGGCAGATTCCCTGGAGGAGCACTGATAG  550

seq1  GTGAATGTGAGCAGCCGGATGTTGGTGCTGGGAACAGGATTCTGGTTCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATGTGAGCAGCCGGATGTTGGTGCTGGGAACAGGATTCTGGTTCTC  600

seq1  TGCAGCAGCAGCGAGTGCTCTTAATCACTGATCCTTCTTTCCAGCTTTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCAGCAGCGAGTGCTCTTAATCACTGATCCTTCTTTCCAGCTTTTA  650

seq1  -TTTTTCTCCT-CCCCCCTCCTCTTCTTCCTCTTCCTCTTCCTCCTCCCC  698
       |||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCTCCTCCCCCCCTCCTCTTCTTCCTCTTCCTCTTCCTCCTCCCC  700

seq1  CTCCCCCTCCCTCCTCCTCCTTTTCCTCTTCCTCCTTTTCTCTCTCTCCT  748
      |||||||||||||||||||| ||||||| |||||||||||||||||||||
seq2  CTCCCCCTCCCTCCTCCTCCATTTCCTC-TCCTCCTTTTCTCTCTCTCCT  749

seq1  TTTTTT-AGGGGTGGCTTTTCTAGACAGGACTTTTTTCTGTGTAGCTTTG  797
      |||||| |||||||||||||||||||||||| ||||||||||||||||||
seq2  TTTTTTAAGGGGTGGCTTTTCTAGACAGGAC-TTTTTCTGTGTAGCTTTG  798

seq1  GCTGCCCTGGAACTTGGCCTGTAGACCAGGCTGGCCTC-AACTCACAAAG  846
      |||| | |||||| ||||||||||||||||||| |||| ||||||| |||
seq2  GCTGTCTTGGAAC-TGGCCTGTAGACCAGGCTGCCCTCAAACTCAC-AAG  846

seq1  AGTTTCCTGC-CTCTGGCCCCCAGGTGCTGGGATTAAGGTCACGTGCCAC  895
      | |||||||| ||||||| |||||||||||||||| |||| || || |||
seq2  AATTTCCTGCTCTCTGGCTCCCAGGTGCTGGGATT-AGGTTAC-TG-CAC  893

seq1  CACAGCCACCCTGCTCCTACGATTCGATTTTCTTTTATAATGCTATAAAG  945
      |  || || |||||| ||   | || ||||   | ||||||||  |||||
seq2  CCTAG-CAACCTGCTTCT--CAATCAATTT--ATGTATAATGC--TAAAG  936

seq1  GATGCCTTCCAGAGCCAGCCTGCATT  971
      || ||    |||| ||||||||| ||
seq2  GAAGC---TCAGA-CCAGCCTGCTTT  958

seq1: chr14_59402525_59403362
seq2: B6Ng01-036A07.g_67_901 (reverse)

seq1  CACCCATTCCCACCTCCCTGCCCTCAATTCCCCTACACTTAATGAGGCCT  50
      | ||||||||||||||||||||||| ||| ||||||||||||||| ||||
seq2  CCCCCATTCCCACCTCCCTGCCCTCCATT-CCCTACACTTAATGAAGCCT  49

seq1  TCTTAGGACCAAGGACCTCTCCTTCCATTGATGCCTGACAAGGCCATCCT  100
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TCTTAGGACCAAGGACCTC-CCTTCCATTGATGCCTGACAAGGCCATCCT  98

seq1  CTGCTACATATGCAGCTGGAGCCATGTGTACTGCTTTGTTGATGGCTTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTACATATGCAGCTGGAGCCATGTGTACTGCTTTGTTGATGGCTTAG  148

seq1  TCCCTGGGAGTTGTAGAGGGTCTGGTTGGTTGATATTGTTGTTCTCTGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGGGAGTTGTAGAGGGTCTGGTTGGTTGATATTGTTGTTCTCTGGA  198

seq1  TGGCCTTTCCTTCTGATCTACACCTTATCTCCATATTTGCTCCTGTGAGC  250
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TGGCCTTTCCTTCTGATCTACA-CTTATCTCCATATTTGCTCCTGTGAGC  247

seq1  ATTTTGTTCTCCTTCTAAGAAGGATGGAAGCACCCACACTTTGGTCTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGTTCTCCTTCTAAGAAGGATGGAAGCACCCACACTTTGGTCTTTC  297

seq1  TTTTCGAGCTTCATGTGGTCTGTGAGTTGTATCCTGGTTATTTGGAGCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCGAGCTTCATGTGGTCTGTGAGTTGTATCCTGGTTATTTGGAGCTT  347

seq1  TTGGGCTAGTATCCACTTATCAGCAGTATTCTTAATAACTGAGTTGCACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGCTAGTATCCACTTATCAGCAGTATTCTTAATAACTGAGTTGCACA  397

seq1  GAAGAATTTGAGCAAGTTCAGTGGTGGCTGTAGATTTCCTTCTCATATGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAATTTGAGCAAGTTCAGTGGTGGCTGTAGATTTCCTTCTCATATGC  447

seq1  CACGGGCCTTAGAGAGGCTGGGTGAGTTCGATTGTATTTCCTCCTCCTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGGGCCTTAGAGAGGCTGGGTGAGTTCGATTGTATTTCCTCCTCCTTC  497

seq1  TTGGCATATCTCTGCCCCTCCTCCAGTCCTCCCCTTGCTCAGCCTTCTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCATATCTCTGCCCCTCCTCCAGTCCTCCCCTTGCTCAGCCTTCTCT  547

seq1  GCCTCCCCAAGTGGGTAATTAGATGACTGCTAAGACTCAGCATCACCCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCCCCAAGTGGGTAATTAGATGACTGCTAAGACTCAGCATCACCCCA  597

seq1  TTCACCCTCTGATCTTTATTGGAAGGCTTTCTTCATTTCCAACAGTAAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACCCTCTGATCTTTATTGGAAGGCTTTCTTCATTTCCAACAGTAAGC  647

seq1  CTGACTTCTGTACATGCAGGTACTTCCAGATGCTTTGACCCCCAGTTCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTTCTGTACATGCAGGTACTTCCAGATGCTTTGACCCCCAGTTCCC  697

seq1  AAGCTGAAGCCGAGGTATGGAAAATTTTAAAAGGCACACATTGTCCCCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGAAGCCGAGGTATGGAAAATTTTAAAAGGCACACATTGTCCCCAT  747

seq1  CAATGCAAATAAAAACCTCTCTTGCCTACTGAGAGACTGGGAACTGGGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGCAAATAAAAACCTCTCTTGCCTACTGAGAGACTGGGAACTGGGGA  797

seq1  TACAGATCTAAAATAGTGGCATGCCTGCACTGGAATTC  838
      ||||||||||||||||||||||||||||||||||||||
seq2  TACAGATCTAAAATAGTGGCATGCCTGCACTGGAATTC  835