BAC Information

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BAC

Clone NameB6Ng01-036G17
Chromosome14 (Build37)
Map Location 29,011,810 - 29,078,797
singlet/doubletdoublet
Overlap geneErc2
Upstream geneLOC665333, Arhgef3, LOC100040147, Ccdc66, LOC665370
Downstream geneLOC100040206, Wnt5a, LOC100040218, Cacna2d3, Lrtm1, Ppia-ps15
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-036G17.bB6Ng01-036G17.g
ACCDH864600DH864601
length439773
definitionDH864600|Mus musculus domesticus DNA, BAC clone: B6Ng01-036G17, 5' end.DH864601|Mus musculus domesticus DNA, BAC clone: B6Ng01-036G17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(29,078,353 - 29,078,797)(29,011,810 - 29,012,582)
sequence
tagtttaccatgtgacccatggaagcagctggtctaccttgttagttgct
tcaagtgcaaccgtgctgcaagctagctctcacacaggggcacctgtggc
accaagatggcaaaggccagcatgcttagtgttacacgtcaaaggaatgt
tgtgaatctgaagtttaaagatttccctacctgaacaaggttcaaggcca
gaagaagtgctagctccaccccaaatcatccaggcaatttctatcccttt
gataaattgaaaaagaggcaatgaagaagggtaggagggaatgttgtcta
tttgtttaagtcttggccgtggagtatgacagattactgtatgctagatc
gaaaagcaagtaactggggcaggggagggcaggggagagcaggggagggc
aggggagggcaggggagggcagaggaggaaggctgggta
gaattcatgtccatcattcagaggacccaaggagattcagaactcagtgg
tcactgtcctctctctccaggccacctccagggcacccccttctacttag
catcttccttctcttccactaggactgcatttctctgtgcagctgtgtta
tacacaaatcttcctcatctctatgtgagtaccacatggtttagagatac
atctctgaacgagtcatttgtagtgaagctcagaaaggcagacacacacc
atgaatgatccaggctgggtaaacacccacctgaagcagggaggaatggg
gacctggcacttacaatgttcacagagacagcaaggcatgagaggaaggc
ttgagccaaagtgtgaagggtctcagccaacaaatacaagaagcaccctc
cacaaagctgaagaatataattcgctttgggagaatgtgggaaactttct
aagagcattgcgtgtggctcatctttgaatgatgggaacttaaggctctg
gggcaggtgaagttgctgaggtcacttcaaatcactcaaatgggtgactg
cccatgaccggctttctcataaggcaagcttgactacaatggacataaag
tgtctcattaaaatggacccagtcttggtccactaactcagcacaaagga
gccaaatgattcctccgtgtcttttaaagtggaaatgaatgacattgcac
agtacctgacctccaagttgagccaaaaatgatcctggcaaaccattttg
attggagaatgaaagagggagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_29078353_29078797
seq2: B6Ng01-036G17.b_44_488 (reverse)

seq1  TACCCAGCCTTCCTCCTCTGCCCTCCCCTGCCCTCCCCTGCCCTCCCCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCAGCCTTCCTCCTCTGCCCTCCCCTGCCCTCCCCTGCCCTCCCCTG  50

seq1  CTCTCCCCTGCCCTCCCCTGCCCCAGTTACTTGCTTTTCGATCTAGCATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCCCTGCCCTCCCCTGCCCCAGTTACTTGCTTTTCGATCTAGCATA  100

seq1  CAGTAATCTGTCATACTCCACGGCCAAGACTTAAACAAATAGACAACATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAATCTGTCATACTCCACGGCCAAGACTTAAACAAATAGACAACATT  150

seq1  CCCTCCTACCCTTCTTCATTGCCTCTTTTTCAATTTATCAAAGGGATAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCTACCCTTCTTCATTGCCTCTTTTTCAATTTATCAAAGGGATAGA  200

seq1  AATTGCCTGGATGATTTGGGGTGGAGCTAGCACTTCTTCTGGCCTTGAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGCCTGGATGATTTGGGGTGGAGCTAGCACTTCTTCTGGCCTTGAAC  250

seq1  CTTGTTCAGGTAGGGAAATCTTTAAACTTCAGATTCACAACATTCCTTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTCAGGTAGGGAAATCTTTAAACTTCAGATTCACAACATTCCTTTG  300

seq1  ACGTGTAACACTAAGCATGCTGGCCTTTGCCATCTTGGTGCCACAGGTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTGTAACACTAAGCATGCTGGCCTTTGCCATCTTGGTGCCACAGGTGC  350

seq1  CCCTGTGTGAGAGCTAGCTTGCAGCACGGTTGCACTTGAAGCAACTAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTGTGAGAGCTAGCTTGCAGCACGGTTGCACTTGAAGCAACTAACA  400

seq1  AGGTAGACCAGCTGCTTCCATGGGTCACATGGTAAACTAGAATTC  445
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAGACCAGCTGCTTCCATGGGTCACATGGTAAACTAGAATTC  445

seq1: chr14_29011810_29012582
seq2: B6Ng01-036G17.g_65_837

seq1  GAATTCATGTCCATCATTCAGAGGACCCAAGGAGATTCAGAACTCAGTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGTCCATCATTCAGAGGACCCAAGGAGATTCAGAACTCAGTGG  50

seq1  TCACTGTCCTCTCTCTCCAGGCCACCTCCAGGGCACCCCCTTCTACTTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGTCCTCTCTCTCCAGGCCACCTCCAGGGCACCCCCTTCTACTTAG  100

seq1  CATCTTCCTTCTCTTCCACTAGGACTGCATTTCTCTGTGCAGCTGTGTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTCCTTCTCTTCCACTAGGACTGCATTTCTCTGTGCAGCTGTGTTA  150

seq1  TACACAAATCTTCCTCATCTCTATGTGAGTACCACATGGTTTAGAGATAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAAATCTTCCTCATCTCTATGTGAGTACCACATGGTTTAGAGATAC  200

seq1  ATCTCTGAACGAGTCATTTGTAGTGAAGCTCAGAAAGGCAGACACACACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTGAACGAGTCATTTGTAGTGAAGCTCAGAAAGGCAGACACACACC  250

seq1  ATGAATGATCCAGGCTGGGTAAACACCCACCTGAAGCAGGGAGGAATGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATGATCCAGGCTGGGTAAACACCCACCTGAAGCAGGGAGGAATGGG  300

seq1  GACCTGGCACTTACAATGTTCACAGAGACAGCAAGGCATGAGAGGAAGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTGGCACTTACAATGTTCACAGAGACAGCAAGGCATGAGAGGAAGGC  350

seq1  TTGAGCCAAAGTGTGAAGGGTCTCAGCCAACAAATACAAGAAGCACCCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGCCAAAGTGTGAAGGGTCTCAGCCAACAAATACAAGAAGCACCCTC  400

seq1  CACAAAGCTGAAGAATATAATTCGCTTTGGGAGAATGTGGGAAACTTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAAGCTGAAGAATATAATTCGCTTTGGGAGAATGTGGGAAACTTTCT  450

seq1  AAGAGCATTGCGTGTGGCTCATC-TTGAATGATGGGAACTTAAGGCTCTG  499
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AAGAGCATTGCGTGTGGCTCATCTTTGAATGATGGGAACTTAAGGCTCTG  500

seq1  GGGCAGGTGAAGTTGCTGAGGTCACTTCAAATCACTCAAATGGGTGACTG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGGTGAAGTTGCTGAGGTCACTTCAAATCACTCAAATGGGTGACTG  550

seq1  CCCATGACCGGCTTTCTCATAAGGCAAGCTTGACTACAATGGACATAAAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGACCGGCTTTCTCATAAGGCAAGCTTGACTACAATGGACATAAAG  600

seq1  TGTCTCATTAAAATGGACCCAGTCTTGGTCCACTAACTCAGCACAAAGGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCATTAAAATGGACCCAGTCTTGGTCCACTAACTCAGCACAAAGGA  650

seq1  GCCAAATGATTCCTCCGTGTCTTTTAAAGTGGAAATGAATGACATTGCAC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAATGATTCCTCCGTGTCTTTTAAAGTGGAAATGAATGACATTGCAC  700

seq1  AGTACCTGACCTCCAAGTTGAGCCAAAAATGATCCTGGCAAAACCATTTT  749
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  AGTACCTGACCTCCAAGTTGAGCCAAAAATGATCCTGGC-AAACCATTTT  749

seq1  GATTGGAGAATGAAAGAGGGAGGA  773
      ||||||||||||||||||||||||
seq2  GATTGGAGAATGAAAGAGGGAGGA  773