BAC Information

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BAC

Clone NameB6Ng01-036H02
Chromosome14 (Build37)
Map Location 83,863,100 - 83,864,078
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC100043773, LOC100043279, LOC100043775, LOC100043776, LOC100043280, LOC100043285, Pcdh17, 9630013A20Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-036H02.bB6Ng01-036H02.g
ACCDH864618DH864619
length992677
definitionDH864618|Mus musculus domesticus DNA, BAC clone: B6Ng01-036H02, 5' end.DH864619|Mus musculus domesticus DNA, BAC clone: B6Ng01-036H02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattctttaaaataacataataaaacataatataaacaccctagg
tttcccaatttgccttacagaattaagttttcaagcttactaaaccgagt
gatatcataagatgcatcagtttaaaattacataaatctggaactaagag
ttgaatttgtattggaattgcagcctgggagaagatgttgtcccatcatt
acatgctgagagaataaaagagcaaatcatcatatagctgtcaactccta
atactgttaatgtgttaacaaaactagcaattcttgaaataatgaacaac
tttggaaaaaaaaccaaattatataatttcaagttctatgtacttgaacc
tttggagtttaggatagactttacccagcacaggatgtaggatctcccaa
gtcttgggcttggggcaggttgagcataccaggcataacatccatcctgc
aggtcaattctcatatctaatcagaaagcataccatttttactttttaaa
aaaaatacatatgtaaaaatatcaatgacaacaaatattagcattcacaa
aaaagacatatttaaacaataaaatatgacagaaaatggttttcagaaat
gagaaaaaagggagggcctcacttgtttaccatattttcagttattttgt
ttttattttaaatggctttttttttcttattttttggtttttcaagacag
ggccttctctgtacctgggttgtcctgggaactcatttctgggccaggct
gggtctcgaacctcagaaaatccacctacctctgccttcccaagtgctgg
gaaaaaagtaccaccacctgccttggctaattaaaaacttttaattaaaa
tacttttttcccaaataaaaaccttgacttaaagttttaagaatgatgga
tacaatgtattaaatatgaaaataaaatagtgaaattataattccaaata
atcccaaatgatatgattgttaaattaacaatagactgctga

gaattccaggacagccagggctgcacagagaaaccctgtcttgaaaaaca
aaacaaaacaaaacaaatcaaaacaaacaataaaacaaaacaaagaaaca
aaaagaaaacaaagtacagtagaagttggaaaccacgtggcaaatgtata
tataacctttggaggacttccttcttcttgggtttcatgtgtttttcaaa
ttgtatcttaggtagtctaagtttctggggagctgagatggaagaaagga
ccatccagagactgccccacctgaggacccatcccataaacaaccaccaa
acccagacagtatcgcatatgccagcaagattttgctgacaggaccctga
tataactatctcttgtgaggttattccagtgcctggcaaatacagaagtg
gatgctcacagtcatctattgtatggaacacagggcccctaatgaagaaa
ctagagaacatacccaagttgctaaaggggtctacaactctataggagga
tccacaatatgaactaaccagtaccccctcagaactgtgtctctagttgc
attatgtacaagagtttggcctagttaaccatcaatgggaggagagtccc
tagacttcgaagatcatatgccttagtacaaggaatgccaggatcaggca
gctgaagttggtggttgatgaataagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_83863100_83864078
seq2: B6Ng01-036H02.b_42_1033

seq1  GAATTCATTCTTTAAAATAACATAATAAAACATAATATAAACACCCTAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTCTTTAAAATAACATAATAAAACATAATATAAACACCCTAGG  50

seq1  TTTCCCAATTTGCCTTACAGAATTAAGTTTTCAAGCTTACTAAACCGAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCAATTTGCCTTACAGAATTAAGTTTTCAAGCTTACTAAACCGAGT  100

seq1  GATATCATAAGATGCATCAGTTTAAAATTACATAAATCTGGAACTAAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATCATAAGATGCATCAGTTTAAAATTACATAAATCTGGAACTAAGAG  150

seq1  TTGAATTTGTATTGGAATTGCAGCCTGGGAGAAGATGTTGTCCCATCATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATTTGTATTGGAATTGCAGCCTGGGAGAAGATGTTGTCCCATCATT  200

seq1  ACATGCTGAGAGAATAAAAGAGCAAATCATCATATAGCTGTCAACTCCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCTGAGAGAATAAAAGAGCAAATCATCATATAGCTGTCAACTCCTA  250

seq1  ATACTGTTAATGTGTTAACAAAACTAGCAATTCTTGAAATAATGAACAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTGTTAATGTGTTAACAAAACTAGCAATTCTTGAAATAATGAACAAC  300

seq1  TTTGGAAAAAAAACCAAATTATATAATTTCAAGTTCTATGTACTTGAACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAAAAAAAACCAAATTATATAATTTCAAGTTCTATGTACTTGAACC  350

seq1  TTTGGAGTTTAGGATAGACTTTACCCAGCACAGGATGTAGGATCTCCCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAGTTTAGGATAGACTTTACCCAGCACAGGATGTAGGATCTCCCAA  400

seq1  GTCTTGGGCTTGGGGCAGGTTGAGCATACCAGGCATAACATCCATCCTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTGGGCTTGGGGCAGGTTGAGCATACCAGGCATAACATCCATCCTGC  450

seq1  AGGTCAATTCTCATATCTAATCAGAAAGCATACCATTTTTACTTTTTAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCAATTCTCATATCTAATCAGAAAGCATACCATTTTTACTTTTTAAA  500

seq1  AAAAATACATATGTAAAAATATCAATGACAACAAATATTAGCATTCACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATACATATGTAAAAATATCAATGACAACAAATATTAGCATTCACAA  550

seq1  AAAAGACATATTTAAACAATAAAATATGACAGAAAAT-GTTTTCAGAAAT  599
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AAAAGACATATTTAAACAATAAAATATGACAGAAAATGGTTTTCAGAAAT  600

seq1  GAGAAAATAGGTA-GGTCTCACTTGTTTA-CATA-TTTCAGTTATTT--G  644
      ||||||| ||| | || |||||||||||| |||| ||||||||||||   
seq2  GAGAAAAAAGGGAGGGCCTCACTTGTTTACCATATTTTCAGTTATTTTGT  650

seq1  TTTTAATTTAAATG--CTTTTTTTTCTTA-TTTTTGGTTTTTCAAGACAG  691
      ||||| ||||||||   |||||||||||| ||||||||||||||||||||
seq2  TTTTATTTTAAATGGCTTTTTTTTTCTTATTTTTTGGTTTTTCAAGACAG  700

seq1  GG-CTTCTCTGTACCT-GGTTGTCCT-GGAACTCA-TTCT-GGCCAGGCT  736
      || ||||||||||||| ||||||||| |||||||| |||| |||||||||
seq2  GGCCTTCTCTGTACCTGGGTTGTCCTGGGAACTCATTTCTGGGCCAGGCT  750

seq1  -GGTCTCGAA-CTCAG-AAATCCACCTACCTCTGCC-TCCCAAGTGCTGG  782
       ||||||||| ||||| ||||||||||||||||||| |||||||||||||
seq2  GGGTCTCGAACCTCAGAAAATCCACCTACCTCTGCCTTCCCAAGTGCTGG  800

seq1  GAATAAAGTACCACCA-CTGCC-TGGCTAATTTAAAAACTTTTA--TTAA  828
      ||| |||||||||||| ||||| ||||||| |||||||||||||  | ||
seq2  GAAAAAAGTACCACCACCTGCCTTGGCTAA-TTAAAAACTTTTAATTAAA  849

seq1  ATACTTTTTTCCCAAATAAAAACCCTGACTT-AAGTTTT-AGAATGATGG  876
      |||||||||||||||||||||||| |||||| ||||||| ||||||||||
seq2  ATACTTTTTTCCCAAATAAAAACCTTGACTTAAAGTTTTAAGAATGATGG  899

seq1  ATACAATGTAATTAATATGAAAATAAAATAGTGAAATATATATTCCAAAA  926
      |||||||||| | |||||||||||||||||||||||| |||| | | |||
seq2  ATACAATGTATTAAATATGAAAATAAAATAGTGAAAT-TATAATTCCAAA  948

seq1  TAAATCCCAAAATGATAATGGATTTTGTTATATTTTAACAAATAGACTGC  976
      | |||||| ||||||| |||    |||||| |  ||||| ||||||||||
seq2  T-AATCCC-AAATGAT-ATG---ATTGTTAAA--TTAAC-AATAGACTGC  989

seq1  TGA  979
      |||
seq2  TGA  992


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