BAC Information

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BAC

Clone NameB6Ng01-036O03
Chromosome14 (Build37)
Map Location 102,156,223 - 102,307,057
singlet/doubletdoublet
Overlap geneLmo7, LOC100043795
Upstream gene1700110M21Rik, LOC100043421, LOC382936, Tbc1d4, Commd6, Uchl3
Downstream geneLOC545567, LOC669278
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-036O03.bB6Ng01-036O03.g
ACCDH864920DH864921
length1,1191,078
definitionDH864920|Mus musculus domesticus DNA, BAC clone: B6Ng01-036O03, 5' end.DH864921|Mus musculus domesticus DNA, BAC clone: B6Ng01-036O03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(102,305,911 - 102,307,057)(102,156,223 - 102,157,300)
sequence
gaattctttaggacattcctgtgaagtgctgggttcctatactactagat
tatgcctaagactttttatatgtaaacatagctacaatttggtcatgctt
caactagtaacaatgacttcaggcaggacctctaacttcttaactttctc
tacaaaaatttaagccatgtgcacgtaggacaaaggctctgaactacaga
agacaatcgaggagttacctctttgcactagatgggacaaacgtacaaat
tgtcaagggaaacctacattattttgatgactaagaaatgaatttcccaa
ggagtttcagttgtccatgccagaaaagagaaagtcatagctatccatca
atggctcagcgtttacgctgaaagcagtctccctcggatcggctacaatt
tgaacagaaatctccactaaaagtgagattgcaccacttaccgtcaggct
gatgagccaggaggagacttttaattgtctaaggatagacctgatgtcac
cagagtatgaattatttctcctggagttgatgaattataatttccatggc
actaccactgggagtgagaaacagagtctatcttatgcaccaagaaaact
attcctttccagtgtttctaactagacaaacgtgttggcttaggaaaccc
tacatatttaataataaaaaaaaaaaccactaaaagtagatttgggtgac
acagtccagaatagcaaaggaaaaaaatctttaaatttctgtccacaaag
ttccttagtgcatgccaaattctccttggaatgagaaaaggagggaagcg
gccttcaagtcgcagccccgctctaacactggagccatctcccttaccca
agatagacctcaacctttgggcatcctctgtatacttactactttagagc
cgaagtggcctgcccactccgaccagctgattcagcctccagcttctatc
tacaaacccactaagtgcatacagcctacaggtccttaccagtggggaac
actctctagtcactgatgtcctatccactgcccaacctcacagtcctcct
actcatctagccttatcagtgccgttccctcctctctcatctggactcct
cagctaacttctgaccatg
gaattcaattcccagaaccactataaagatggagagagagagatagagag
agatagagatagagatagagagagagagagagagagagagagagagagag
agagaaccaagtccataaagttgtcttctggcctcactgtctctccccca
tcagacacgcatgcactgataccaaaagcagacactagaggatgattccc
tccagcctccacaggaatgtgcacacagacacacccacttacattctaac
atgcgtacatatacgcacatatgctacactcacataggttaaaaatatta
tcgtgccatcaagtagcctgacatcgagagacagaattatgaccgatttt
gttttacattcttaattggttttaatattttcaattctagaataagggtc
taacttctccagttagataccaaagagttgaaatgcgtctgtttctgctt
cgaagaccgcttatcttgtgtgtgttcttgacattgcttctgtctgtttc
ccccccaggattttcccttgttttgtattttctttcccctttttcactat
tctttttcccttttcttttctttcttttttcttctttggtttgggagaca
gggccttataagtatggtcccaggtttggccccagaacttgctgtgtagt
cctgatagaccctggacttgccaagcctcccgtctcaaccttaaaataag
gatcatagctgcttataagattcttttaaccaaaaggggtttttgtcatc
tttcctctgtgctttccggtaggatttcaaattttctttaaaaaaaaaag
tttaataatgtaaatggacatttttagattgaagaaagtcaaactgagaa
tagactaaaaaattaatgagctggtgaagatggctcatggggtaagacca
ctgactgctcttcagaggtcctgagtcaatctcagcactacatggtggct
cacagccatctgtaagtgagatagacgccctcttctgtgccaagacagtt
gcaatgtattactataataataaatctctaaaaaaagaaaagaattagta
gccttcttattcttgaagatgcccatga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_102305911_102307057
seq2: B6Ng01-036O03.b_45_1163 (reverse)

seq1  CATGGTCAGAAAGGTTATGACTGAGGAAGTCCAAGATGAGAGAGGAGGAG  50
      |||||||||||  ||||   |||||| ||||| ||||||||||||||| |
seq2  CATGGTCAGAA--GTTA--GCTGAGG-AGTCC-AGATGAGAGAGGAGG-G  43

seq1  AACAGCACACTGATAAGACTAAGATGAAGGTAGAGAGACTGTGAGGGTTG  100
      ||| |  |||||||||| || ||||||  ||||   |||||||| |||||
seq2  AACGG--CACTGATAAGGCT-AGATGA--GTAGGAGGACTGTGA-GGTTG  87

seq1  GGCAAGGTGGATAGGGACATCAGGTGACTTAGAAGAGTGTTCCCCACTGG  150
      ||||  ||||||| |||||||| ||||| ||| |||||||||||||||||
seq2  GGCA--GTGGATA-GGACATCA-GTGAC-TAG-AGAGTGTTCCCCACTGG  131

seq1  TAAGGACCTGGTAGGCTGTATGCACTTTAGTTGGGTTTTGTAGATAGAAG  200
      ||||||||| ||||||||||||||| |||||  || ||||||||||||||
seq2  TAAGGACCT-GTAGGCTGTATGCAC-TTAGT--GGGTTTGTAGATAGAAG  177

seq1  CTTGGAAGGCTTGAATCAGCTGGTCGGAGTGGGCAGGCCACCTTCGGCTC  250
      ||  | |||| ||||||||||||||||||||||||||||| |||||||||
seq2  CT--GGAGGC-TGAATCAGCTGGTCGGAGTGGGCAGGCCA-CTTCGGCTC  223

seq1  TAAAGTAGTAAGTATACAGAGGATGCCCAAAGGTTGAGGTCTATCTTTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TAAAGTAGTAAGTATACAGAGGATGCCCAAAGGTTGAGGTCTATC-TTGG  272

seq1  GTAAGGGAGATGGCTCCAGTGTTAGAGCGGGGCTGCGACTTGAAGGCCGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGGGAGATGGCTCCAGTGTTAGAGCGGGGCTGCGACTTGAAGGCCGC  322

seq1  TTCCCTCCTTTTCTCATTCCAAGGAGAATTTGGCATGCACTAAGGAACTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTCCTTTTCTCATTCCAAGGAGAATTTGGCATGCACTAAGGAACTT  372

seq1  TGTGGACAGAAATTTAAAGATTTTTTTCCTTTGCTATTCTGGACTGTGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGACAGAAATTTAAAGATTTTTTTCCTTTGCTATTCTGGACTGTGTC  422

seq1  ACCCAAATCTACTTTTAGTGGTTTTTTTTTTTATTATTAAATATGTAGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAAATCTACTTTTAGTGGTTTTTTTTTTTATTATTAAATATGTAGGG  472

seq1  TTTCCTAAGCCAACACGTTTGTCTAGTTAGAAACACTGGAAAGGAATAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTAAGCCAACACGTTTGTCTAGTTAGAAACACTGGAAAGGAATAGT  522

seq1  TTTCTTGGTGCATAAGATAGACTCTGTTTCTCACTCCCAGTGGTAGTGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTGGTGCATAAGATAGACTCTGTTTCTCACTCCCAGTGGTAGTGCC  572

seq1  ATGGAAATTATAATTCATCAACTCCAGGAGAAATAATTCATACTCTGGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAATTATAATTCATCAACTCCAGGAGAAATAATTCATACTCTGGTG  622

seq1  ACATCAGGTCTATCCTTAGACAATTAAAAGTCTCCTCCTGGCTCATCAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCAGGTCTATCCTTAGACAATTAAAAGTCTCCTCCTGGCTCATCAGC  672

seq1  CTGACGGTAAGTGGTGCAATCTCACTTTTAGTGGAGATTTCTGTTCAAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACGGTAAGTGGTGCAATCTCACTTTTAGTGGAGATTTCTGTTCAAAT  722

seq1  TGTAGCCGATCCGAGGGAGACTGCTTTCAGCGTAAACGCTGAGCCATTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGCCGATCCGAGGGAGACTGCTTTCAGCGTAAACGCTGAGCCATTGA  772

seq1  TGGATAGCTATGACTTTCTCTTTTCTGGCATGGACAACTGAAACTCCTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATAGCTATGACTTTCTCTTTTCTGGCATGGACAACTGAAACTCCTTG  822

seq1  GGAAATTCATTTCTTAGTCATCAAAATAATGTAGGTTTCCCTTGACAATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATTCATTTCTTAGTCATCAAAATAATGTAGGTTTCCCTTGACAATT  872

seq1  TGTACGTTTGTCCCATCTAGTGCAAAGAGGTAACTCCTCGATTGTCTTCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACGTTTGTCCCATCTAGTGCAAAGAGGTAACTCCTCGATTGTCTTCT  922

seq1  GTAGTTCAGAGCCTTTGTCCTACGTGCACATGGCTTAAATTTTTGTAGAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTTCAGAGCCTTTGTCCTACGTGCACATGGCTTAAATTTTTGTAGAG  972

seq1  AAAGTTAAGAAGTTAGAGGTCCTGCCTGAAGTCATTGTTACTAGTTGAAG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTAAGAAGTTAGAGGTCCTGCCTGAAGTCATTGTTACTAGTTGAAG  1022

seq1  CATGACCAAATTGTAGCTATGTTTACATATAAAAAGTCTTAGGCATAATC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGACCAAATTGTAGCTATGTTTACATATAAAAAGTCTTAGGCATAATC  1072

seq1  TAGTAGTATAGGAACCCAGCACTTCACAGGAATGTCCTAAAGAATTC  1147
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAGTATAGGAACCCAGCACTTCACAGGAATGTCCTAAAGAATTC  1119

seq1: chr14_102156223_102157300
seq2: B6Ng01-036O03.g_67_1144

seq1  GAATTCAATTCCCAGAACCACTATAAAGATGGAGAGAGAGAGATAGAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATTCCCAGAACCACTATAAAGATGGAGAGAGAGAGATAGAGAG  50

seq1  AGATAGAGATAGAGATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGAGATAGAGATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  100

seq1  AGAGAACCAAGTCCATAAAGTTGTCTTCTGGCCTCACTGTCTCTCCCCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAACCAAGTCCATAAAGTTGTCTTCTGGCCTCACTGTCTCTCCCCCA  150

seq1  TCAGACACGCATGCACTGATACCAAAAGCAGACACTAGAGGATGATTCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGACACGCATGCACTGATACCAAAAGCAGACACTAGAGGATGATTCCC  200

seq1  TCCAGCCTCCACAGGAATGTGCACACAGACACACCCACTTACATTCTAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCCTCCACAGGAATGTGCACACAGACACACCCACTTACATTCTAAC  250

seq1  ATGCGTACATATACGCACATATGCTACACTCACATAGGTTAAAAATATTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCGTACATATACGCACATATGCTACACTCACATAGGTTAAAAATATTA  300

seq1  TCGTGCCATCAAGTAGCCTGACATCGAGAGACAGAATTATGACCGATTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTGCCATCAAGTAGCCTGACATCGAGAGACAGAATTATGACCGATTTT  350

seq1  GTTTTACATTCTTAATTGGTTTTAATATTTTCAATTCTAGAATAAGGGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTACATTCTTAATTGGTTTTAATATTTTCAATTCTAGAATAAGGGTC  400

seq1  TAACTTCTCCAGTTAGATACCAAAGAGTTGAAATGCGTCTGTTTCTGCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTCTCCAGTTAGATACCAAAGAGTTGAAATGCGTCTGTTTCTGCTT  450

seq1  CGAAGACCGCTTATCTTGTGTGTGTTCTTGACATTGCTTCTGTCTGTTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAGACCGCTTATCTTGTGTGTGTTCTTGACATTGCTTCTGTCTGTTTC  500

seq1  CCCCCCAGGA-TTTCCCTTG-TTTGTA-TTTCTT--CCCCTTTTCACTAT  545
      |||||||||| ||||||||| |||||| ||||||  ||| ||||||||||
seq2  CCCCCCAGGATTTTCCCTTGTTTTGTATTTTCTTTCCCCTTTTTCACTAT  550

seq1  TC-TTTTCCCTTT--CTTTCTTTC-TTTTTCTTCTTTGGTTT-GGAGACA  590
      || ||||||||||   |||||||| ||||||||||||||||| |||||||
seq2  TCTTTTTCCCTTTTCTTTTCTTTCTTTTTTCTTCTTTGGTTTGGGAGACA  600

seq1  GGGCCTTAT-AGTATGGT-CCAGGTT--GGCCCAGAACTTGCTGTGTAGT  636
      ||||||||| |||||||| |||||||  | ||||||||||||||||||||
seq2  GGGCCTTATAAGTATGGTCCCAGGTTTGGCCCCAGAACTTGCTGTGTAGT  650

seq1  CCTGATAGACCCTGGACTTGCC-AGCCTCCCGTCTCAGCCTT-AGATTAG  684
      |||||||||||||||||||||| |||||||||||||| |||| | || ||
seq2  CCTGATAGACCCTGGACTTGCCAAGCCTCCCGTCTCAACCTTAAAATAAG  700

seq1  GATCATAGCTGGCTATAAGATTCTTTT-ACCAAAGGTGCTTTTTGTCATC  733
      |||||||||||  |||||||||||||| |||||| | | |||||||||||
seq2  GATCATAGCTGCTTATAAGATTCTTTTAACCAAAAGGGGTTTTTGTCATC  750

seq1  TTTCCTCTGTGCTTTTCGGTAGTATTTCAAATTTTCTTTAAAAAAAAAAG  783
      ||||||||||||||| |||||| |||||||||||||||||||||||||||
seq2  TTTCCTCTGTGCTTTCCGGTAGGATTTCAAATTTTCTTTAAAAAAAAAAG  800

seq1  TTTTAAATATGTAAAT-GACATTTTTAGGATAGAGAAAAGTCAAACTGAG  832
       |||||  |||||||| |||||||||| ||| ||  ||||||||||||||
seq2  -TTTAATAATGTAAATGGACATTTTTA-GATTGAAGAAAGTCAAACTGAG  848

seq1  AAGTAGACTAAGAAATTAATGAGCTGGTG-AGATGGCTCAGTGGGTAAGA  881
      || |||||||| ||||||||||||||||| ||||||||||  ||||||||
seq2  AA-TAGACTAAAAAATTAATGAGCTGGTGAAGATGGCTCATGGGGTAAGA  897

seq1  GCCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAAATCTCAGCAACCACA  931
       ||||||||||||||| ||||||||||||||   ||||||||| || |||
seq2  -CCACTGACTGCTCTT-CAGAGGTCCTGAGT--CAATCTCAGC-ACTACA  942

seq1  TGGTGGCTCACAGCCATCTGT-AGTGAGATATGACGCCCTCTTCTGGTGT  980
      ||||||||||||||||||||| ||||||||| ||||||||||||| ||| 
seq2  TGGTGGCTCACAGCCATCTGTAAGTGAGATA-GACGCCCTCTTCT-GTGC  990

seq1  CTAAAGACAGTTGCAATGTACTTACATATAATAAATAAAATCTTTAAAAA  1030
      |  ||||||||||||||||| |||| ||||||||   |||||| |  |||
seq2  C--AAGACAGTTGCAATGTA-TTAC-TATAATAA--TAAATCTCT--AAA  1032

seq1  AAAAGAAAAGAAATTAAGTAGCTTTCTATATCTGAAAAGATG-CCATGA  1078
      ||||||||||||  | |||||| |||| |||     |||||| ||||||
seq2  AAAAGAAAAGAA--TTAGTAGCCTTCT-TATTCTTGAAGATGCCCATGA  1078